Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 2.4e-69 265.4 136 100.0
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 1.1e-26 123.6 101 64.4
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 9.0e-24 114.0 80 67.5
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.2e-23 113.6 133 51.1
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 2.0e-23 112.8 78 70.5
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 2.6e-23 112.5 115 54.8
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 3.4e-23 112.1 95 62.1
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 4.5e-23 111.7 133 51.9
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 4.5e-23 111.7 133 49.6
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 5.9e-23 111.3 149 47.7
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 5.9e-23 111.3 117 53.8
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 5.9e-23 111.3 139 48.9
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 5.9e-23 111.3 139 49.6
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 1.0e-22 110.5 129 51.9
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 1.3e-22 110.2 139 48.2
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 2.9e-22 109.0 99 55.6
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 2.9e-22 109.0 120 50.0
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 2.9e-22 109.0 132 47.7
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 3.8e-22 108.6 120 50.0
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 3.8e-22 108.6 77 68.8
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 8.5e-22 107.5 137 49.6
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 8.5e-22 107.5 133 48.1
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.1e-21 107.1 109 59.6
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 1.1e-21 107.1 125 52.8
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 1.1e-21 107.1 135 47.4
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 1.4e-21 106.7 130 49.2
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 1.4e-21 106.7 135 50.4
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 2.5e-21 105.9 87 59.8
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 4.2e-21 105.1 136 49.3
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 5.5e-21 104.8 142 47.9
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 5.5e-21 104.8 132 46.2
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 9.4e-21 104.0 138 47.8
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 9.4e-21 104.0 133 46.6
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 1.2e-20 103.6 130 48.5
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 1.2e-20 103.6 82 63.4
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 1.6e-20 103.2 138 49.3
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 3.6e-20 102.1 120 51.7
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 4.6e-20 101.7 81 61.7
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 6.1e-20 101.3 90 58.9
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.0e-19 100.5 136 47.8
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 1.4e-19 100.1 130 46.9
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 5.1e-19 98.2 128 44.5
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 5.1e-19 98.2 129 48.1
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 6.7e-19 97.8 102 52.0
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 6.7e-19 97.8 102 52.0
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 6.7e-19 97.8 136 48.5
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 6.7e-19 97.8 74 63.5
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 8.8e-19 97.4 142 47.2
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.1e-18 97.1 147 42.9
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 1.1e-18 97.1 156 42.3
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.1e-18 97.1 109 50.5
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 1.5e-18 96.7 136 44.1
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.5e-18 96.7 90 54.4
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 1.9e-18 96.3 136 47.8
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 1.9e-18 96.3 108 52.8
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 3.3e-18 95.5 129 47.3
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 4.3e-18 95.1 134 44.8
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 4.3e-18 95.1 123 48.0
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 4.3e-18 95.1 135 43.0
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 4.3e-18 95.1 135 43.0
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 4.3e-18 95.1 133 43.6
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 5.7e-18 94.7 129 48.1
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 7.4e-18 94.4 145 42.1
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 7.4e-18 94.4 103 52.4
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 7.4e-18 94.4 96 55.2
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 1.3e-17 93.6 74 63.5
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 1.3e-17 93.6 129 46.5
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 1.3e-17 93.6 106 51.9
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 1.3e-17 93.6 132 43.2
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 1.7e-17 93.2 83 56.6
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 2.2e-17 92.8 105 51.4
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 2.8e-17 92.4 137 46.0
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 2.8e-17 92.4 124 47.6
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 2.8e-17 92.4 129 48.1
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 2.8e-17 92.4 134 44.0
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 3.7e-17 92.0 96 53.1
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 3.7e-17 92.0 96 53.1
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 3.7e-17 92.0 139 43.9
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 6.3e-17 91.3 135 45.2
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 6.3e-17 91.3 82 56.1
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 8.2e-17 90.9 117 48.7
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.1e-16 90.5 108 50.9
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 1.1e-16 90.5 133 45.1
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 1.8e-16 89.7 134 40.3
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 1.8e-16 89.7 136 44.1
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 2.4e-16 89.4 136 42.6
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 3.1e-16 89.0 143 42.0
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 3.1e-16 89.0 123 45.5
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 4.1e-16 88.6 129 45.0
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 6.9e-16 87.8 135 43.7
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 6.9e-16 87.8 128 46.1
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 1.2e-15 87.0 83 56.6
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 1.2e-15 87.0 139 43.9
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 1.5e-15 86.7 135 42.2
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 1.5e-15 86.7 132 44.7
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 2.0e-15 86.3 100 46.0
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 2.0e-15 86.3 101 51.5
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 2.0e-15 86.3 134 42.5
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 2.0e-15 86.3 136 41.9
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 2.6e-15 85.9 123 46.3
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 2.6e-15 85.9 137 41.6
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 2.6e-15 85.9 100 50.0
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 4.5e-15 85.1 111 43.2
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 2.2e-14 82.8 100 49.0
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 6.5e-14 81.3 73 57.5
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 6.5e-14 81.3 91 48.4
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 1.4e-13 80.1 159 39.0
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.4e-13 80.1 104 44.2
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 1.6e-12 76.6 70 57.1
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 2.1e-12 76.3 82 48.8
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 2.7e-12 75.9 136 39.0
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 6.1e-12 74.7 88 44.3
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 1.8e-11 73.2 68 51.5
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 5.1e-11 71.6 132 41.7
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 5.1e-11 71.6 119 42.9
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 5.1e-11 71.6 119 42.0
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 6.7e-11 71.2 129 42.6
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 8.8e-11 70.9 114 36.8
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 1.5e-10 70.1 82 48.8
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 2.6e-07 59.3 80 42.5
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 1.0e-06 57.4 61 54.1
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 8.5e-06 54.3 82 42.7


User provided reference genes

Program Settings