Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0470351 Helianthus annuus HOM05D003806 ORTHO05D004346 8.6e-306 1053.9 1110 100.0
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 1.7e-107 395.2 626 69.6
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 4.4e-100 370.5 1038 45.9
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 2.3e-80 305.1 292 66.4
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 2.9e-80 304.7 1067 42.3
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 1.6e-57 229.2 263 52.5
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 1.6e-57 229.2 303 49.5
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 2.1e-57 228.8 302 48.3
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 2.1e-57 228.8 302 48.3
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 1.0e-56 226.5 297 48.1
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.7e-56 225.7 277 49.8
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 7.3e-55 220.3 291 47.8
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 7.3e-55 220.3 278 50.4
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 6.2e-54 217.2 264 51.5
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 8.1e-54 216.9 649 33.6
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 5.2e-53 214.2 545 45.0
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 1.3e-51 209.5 298 46.0
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 2.2e-51 208.8 287 47.7
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 5.4e-50 204.1 286 46.9
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 7.1e-50 203.8 266 50.4
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 2.7e-49 201.8 288 46.2
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 3.5e-49 201.4 295 46.8
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 7.8e-49 200.3 222 55.0
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 1.7e-48 199.1 303 45.9
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.7e-48 199.1 222 54.1
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.7e-48 199.1 256 48.8
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 6.6e-48 197.2 293 46.4
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 6.6e-48 197.2 256 48.8
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 2.5e-47 195.3 255 49.0
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 3.3e-47 194.9 265 47.5
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 4.3e-47 194.5 264 46.6
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 7.3e-47 193.7 649 34.1
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 4.7e-46 191.0 281 43.8
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.8e-45 189.1 222 52.7
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 3.1e-45 188.3 222 55.4
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 9.0e-45 186.8 283 43.1
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 1.2e-44 186.4 249 48.2
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 3.4e-44 184.9 269 46.5
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 2.9e-43 181.8 280 43.6
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 3.8e-43 181.4 541 38.1
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 3.8e-43 181.4 492 48.2
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 8.4e-43 180.3 222 54.1
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 2.4e-42 178.7 542 41.9
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 3.2e-42 178.3 227 48.5
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 9.3e-42 176.8 1128 37.9
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 2.1e-41 175.6 512 34.0
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 2.7e-41 175.3 259 43.6
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.5e-41 174.9 222 52.7
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.5e-41 174.9 222 52.7
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 1.0e-40 173.3 263 44.5
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 1.7e-40 172.6 253 44.7
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 1.5e-39 169.5 529 38.2
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 2.5e-39 168.7 541 37.5
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 2.5e-39 168.7 195 51.8
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 3.3e-39 168.3 1189 38.0
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 5.6e-39 167.5 304 40.5
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 9.6e-39 166.8 231 45.9
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 3.6e-38 164.9 263 43.0
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.8e-37 162.5 238 47.5
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 3.1e-37 161.8 267 43.1
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 1.2e-36 159.8 216 45.4
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 2.6e-36 158.7 229 45.4
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 3.4e-36 158.3 303 38.9
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 1.7e-35 156.0 606 30.0
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 2.9e-35 155.2 490 33.5
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 1.1e-34 153.3 507 42.8
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 2.4e-34 152.1 509 31.4
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 1.6e-33 149.4 598 34.6
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 4.6e-33 147.9 243 42.0
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 6.0e-33 147.5 266 41.4
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 6.0e-33 147.5 1238 34.5
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.3e-32 146.4 307 40.4
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 3.0e-32 145.2 531 30.5
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 3.9e-32 144.8 280 39.3
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 5.1e-32 144.4 201 45.3
Actinidia31596 Actinidia chinensis HOM05D003806 ORTHO05D004346 8.7e-32 143.7 490 33.9
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 1.9e-31 142.5 510 32.9
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 3.3e-31 141.7 209 47.8
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 6.2e-30 137.5 299 36.8
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 2.4e-29 135.6 299 36.8
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 2.4e-29 135.6 215 43.3
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 4.0e-29 134.8 221 41.6
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 9.0e-29 133.7 285 36.8
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 1.2e-28 133.3 243 41.2
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.2e-28 133.3 299 36.5
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 8.4e-27 127.1 280 36.8
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.1e-23 116.7 610 38.2
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 2.5e-23 115.5 271 38.0
unitig_85.g27313 Utricularia gibba HOM05D003806 ORTHO05D004346 9.6e-23 113.6 287 33.4
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 1.3e-22 113.2 686 26.5
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 4.0e-21 108.2 519 27.0
ATR0763G047 Amborella trichopoda HOM05D003806 ORTHO05D004346 8.4e-19 100.5 276 34.8
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 4.2e-18 98.2 1231 32.3
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 5.5e-18 97.8 286 33.2
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 7.1e-18 97.4 239 35.6
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 2.3e-16 92.4 148 38.5
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 2.3e-16 92.4 146 43.2
Actinidia12513 Actinidia chinensis HOM05D003806 ORTHO05D004346 8.7e-16 90.5 372 29.3
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 1.1e-15 90.1 187 38.5
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 1.9e-15 89.4 149 44.3
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 7.4e-15 87.4 220 36.4
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 1.3e-14 86.7 84 56.0
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 1.3e-14 86.7 539 38.8
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 2.2e-14 85.9 204 34.8
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 1.1e-13 83.6 134 39.6
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 1.1e-13 83.6 143 40.6
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 2.4e-13 82.4 174 35.6
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 2.4e-13 82.4 174 35.6
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 2.4e-13 82.4 174 35.6
CARHR126030 Cardamine hirsuta HOM05D003806 ORTHO05D004346 2.4e-13 82.4 172 38.4
Actinidia12514 Actinidia chinensis HOM05D003806 ORTHO05D004346 4.1e-13 81.6 98 54.1
AL4G27610 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 6.9e-13 80.9 174 36.8
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 1.2e-12 80.1 223 32.3
Carub.0004s1356 Capsella rubella HOM05D003806 ORTHO05D004346 2.0e-12 79.3 169 38.5
MD09G1138300 Malus domestica HOM05D003806 ORTHO05D004346 4.5e-12 78.2 102 46.1
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 5.9e-12 77.8 171 38.0
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 1.7e-11 76.3 214 36.0
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 3.8e-11 75.1 122 38.5
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 5.0e-11 74.7 164 41.5
AT2G32240 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 5.5e-10 71.2 172 35.5
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 7.2e-10 70.9 145 35.2
SEGI_00522 Sequoiadendron giganteum HOM05D003806 ORTHO05D004346 6.1e-09 67.8 217 27.2
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.3e-08 65.9 146 36.3
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.3e-08 65.9 146 36.3
AUR62043599 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.3e-08 65.9 146 36.3
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.0e-08 65.5 146 36.3
BcaC01g05916 Brassica carinata HOM05D003806 ORTHO05D004346 5.1e-08 64.7 195 33.3
AUR62043987 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.5e-07 63.2 145 35.2
AUR62044057 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.9e-07 62.8 237 30.0
AUR62044188 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.9e-07 62.8 237 30.0
CDE02G3965 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 3.3e-07 62.0 145 33.1
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 3.7e-06 58.5 59 54.2
Oeu021135.1 Olea europaea HOM05D003806 ORTHO05D004346 6.3e-06 57.8 60 56.7
Oeu048050.1 Olea europaea HOM05D003806 ORTHO05D004346 6.3e-06 57.8 49 61.2
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 8.2e-06 57.4 141 33.3


User provided reference genes

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