Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 1.9e-206 722.2 364 100.0
Lsat_1_v5_gn_2_102781 Lactuca sativa HOM05D005759 ORTHO05D007172 3.3e-137 492.3 342 74.9
HanXRQChr16g0513241 Helianthus annuus HOM05D005759 ORTHO05D007172 1.2e-120 437.2 314 74.5
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 1.9e-113 413.3 320 68.4
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 4.3e-97 359.0 398 52.8
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 1.3e-96 357.5 377 52.0
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 3.7e-96 355.9 385 54.5
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 1.7e-93 347.1 382 50.3
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 3.8e-93 345.9 382 50.0
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 8.4e-93 344.7 384 52.6
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 5.5e-92 342.0 388 50.3
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 1.6e-91 340.5 381 49.1
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 1.6e-91 340.5 386 51.3
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 3.5e-91 339.3 398 49.5
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 1.0e-90 337.8 397 48.9
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 1.3e-90 337.4 378 49.2
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 1.6e-88 330.5 395 49.4
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 2.8e-88 329.7 389 50.1
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 8.2e-88 328.2 398 49.2
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 1.1e-87 327.8 381 48.6
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 1.8e-87 327.0 369 50.7
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 2.4e-87 326.6 389 47.6
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 1.5e-86 323.9 396 49.2
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 2.0e-86 323.6 425 47.3
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 1.3e-85 320.9 389 46.5
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 3.2e-84 316.2 385 47.8
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 4.2e-84 315.8 350 53.1
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 4.2e-84 315.8 369 51.2
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 5.5e-84 315.5 381 49.3
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 5.5e-84 315.5 409 46.9
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 1.3e-82 310.8 378 48.1
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 1.8e-82 310.5 390 46.9
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 5.1e-82 308.9 363 47.9
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 1.1e-81 307.8 370 46.2
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.5e-81 307.4 353 51.0
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 2.5e-81 306.6 388 47.2
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 4.3e-81 305.8 368 48.6
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 4.3e-81 305.8 368 48.6
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 4.3e-81 305.8 385 46.2
PGR142G1839 Punica granatum HOM05D005759 ORTHO05D007172 5.7e-81 305.4 382 48.2
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 4.8e-80 302.4 359 48.7
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 6.3e-80 302.0 374 46.8
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 8.2e-80 301.6 379 47.5
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 8.2e-80 301.6 371 47.4
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 1.1e-79 301.2 371 47.4
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 3.1e-79 299.7 389 47.0
AUR62041544 Chenopodium quinoa HOM05D005759 ORTHO05D007172 4.1e-79 299.3 319 55.8
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 4.1e-79 299.3 371 47.4
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 1.2e-78 297.7 380 47.9
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 1.2e-78 297.7 353 48.2
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 1.5e-78 297.4 374 46.5
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 4.5e-78 295.8 375 46.4
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 7.7e-78 295.0 384 47.7
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 7.7e-78 295.0 402 45.8
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 7.7e-78 295.0 362 47.2
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 1.3e-77 294.3 365 46.0
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 2.2e-77 293.5 379 47.2
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 5.0e-77 292.4 384 46.1
CAN.G135.64 Capsicum annuum HOM05D005759 ORTHO05D007172 1.1e-76 291.2 368 46.2
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 7.2e-76 288.5 343 49.9
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 1.4e-74 284.3 392 44.4
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 3.0e-74 283.1 362 45.9
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 3.9e-74 282.7 389 44.2
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 1.1e-73 281.2 383 44.6
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.1e-73 281.2 360 48.3
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 2.0e-73 280.4 336 49.4
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 2.5e-73 280.0 373 45.3
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 2.5e-73 280.0 370 44.3
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 4.3e-73 279.3 395 43.0
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 5.7e-73 278.9 375 45.3
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 5.7e-73 278.9 392 43.4
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 7.4e-73 278.5 371 45.3
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 9.7e-73 278.1 365 43.0
Atru.chr12.959 Acer truncatum HOM05D005759 ORTHO05D007172 3.7e-72 276.2 321 50.5
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 3.7e-72 276.2 372 43.8
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 4.8e-72 275.8 373 43.4
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 1.4e-71 274.2 370 44.3
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 1.8e-71 273.9 389 42.4
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 2.4e-71 273.5 343 45.8
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 3.4e-70 269.6 367 43.3
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 5.9e-70 268.9 363 45.5
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 2.2e-69 266.9 341 44.9
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 2.9e-69 266.5 322 45.0
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 1.4e-68 264.2 368 43.2
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 1.9e-68 263.8 370 47.3
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 1.9e-68 263.8 390 43.3
Peaxi162Scf00244g00007 Petunia axillaris HOM05D005759 ORTHO05D007172 2.5e-68 263.5 315 47.3
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 9.4e-68 261.5 354 45.5
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 9.4e-68 261.5 365 43.3
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 1.6e-67 260.8 367 42.0
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 2.7e-67 260.0 392 41.8
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 4.7e-67 259.2 366 42.6
unitig_736.g22320 Utricularia gibba HOM05D005759 ORTHO05D007172 7.9e-67 258.5 388 41.2
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 7.9e-67 258.5 367 43.6
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 1.4e-66 257.7 366 41.5
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 2.3e-66 256.9 367 41.4
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 9.7e-65 251.5 361 44.3
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 4.1e-63 246.1 392 42.1
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 1.8e-58 230.7 344 41.3
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 3.0e-58 229.9 318 44.7
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.1e-55 221.5 200 53.0
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.6e-54 217.6 362 41.4
Duzib128G1757 Durio zibethinus HOM05D005759 ORTHO05D007172 7.7e-54 215.3 165 59.4
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 2.3e-50 203.8 199 49.2
Ca_06884_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 2.0e-46 190.7 280 42.5
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 5.0e-45 186.0 253 42.3
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 3.0e-42 176.8 224 40.2
Zm00001eb086490 Zea mays HOM05D005759 ORTHO05D007172 1.8e-34 151.0 149 52.3
CSS0000330 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 5.4e-31 139.4 226 41.6
Lsat_1_v5_gn_7_84341 Lactuca sativa HOM05D005759 ORTHO05D007172 8.6e-29 132.1 144 55.6
Pp3c1_25970 Physcomitrium patens HOM05D005759 ORTHO05D007172 1.9e-28 131.0 377 29.2
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 3.3e-28 130.2 425 26.4
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 4.9e-24 116.3 175 38.9
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis HOM05D005759 ORTHO05D007172 9.5e-20 102.1 404 24.8
GSVIVG01034723001 Vitis vinifera HOM05D005759 ORTHO05D007172 2.1e-19 100.9 94 53.2
Zm00001eb201540 Zea mays HOM05D005759 ORTHO05D007172 4.7e-19 99.8 91 53.8
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 6.2e-19 99.4 179 40.8
Peaxi162Scf00244g00111 Petunia axillaris HOM05D005759 ORTHO05D007172 7.1e-15 85.9 83 54.2
SEGI_00328 Sequoiadendron giganteum HOM05D005759 ORTHO05D000001 2.7e-14 84.0 271 31.7
PSO339G2548 Papaver somniferum HOM05D005759 ORTHO05D007172 5.2e-10 69.7 92 40.2
Ca_11766_v3 Cicer arietinum L. HOM05D001348 ORTHO05D002788 3.7e-08 63.5 37 78.4
FAN01G1973 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.1e-07 62.0 301 25.6
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 1.1e-07 62.0 176 26.1
HanXRQChr06g0169121 Helianthus annuus HOM05D005759 ORTHO05D007172 1.4e-07 61.6 59 57.6
Thhalv10007300m.g Eutrema salsugineum HOM05D000032 ORTHO05D007444 7.1e-07 59.3 203 22.7
Sopen08g024840 Solanum pennellii HOM05D000032 ORTHO05D007444 1.2e-06 58.5 189 27.0
CSS0040532 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.6e-06 58.2 103 41.7
HanXRQChr17g0553981 Helianthus annuus HOM05D005759 ORTHO05D007172 1.6e-06 58.2 32 81.2
PGSC0003DMG400009295 Solanum tuberosum HOM05D000032 ORTHO05D007444 2.1e-06 57.8 196 27.0
Solyc08g076200.4 Solanum lycopersicum HOM05D000032 ORTHO05D007444 4.6e-06 56.6 189 26.5
BcaC07g37639 Brassica carinata HOM05D000032 ORTHO05D007444 6.0e-06 56.2 194 26.3
BolC8t48011H Brassica oleracea HOM05D000032 ORTHO05D007444 6.0e-06 56.2 194 26.3
Sp1g27680 Schrenkiella parvula HOM05D000032 ORTHO05D007444 6.0e-06 56.2 194 27.3


User provided reference genes

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