Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0450011 Helianthus annuus HOM05D001811 ORTHO05D001738 2.8e-24 114.4 56 100.0
Actinidia14696 Actinidia chinensis HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
Actinidia18202 Actinidia chinensis HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
CSS0025180 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
Cc08_g10090 Coffea canephora HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
ECA240G3342 Erigeron canadensis HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
HanXRQChr03g0078751 Helianthus annuus HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
HanXRQChr13g0410631 Helianthus annuus HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
Lsat_1_v5_gn_5_47180 Lactuca sativa HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
Rhsim07G0144500 Rhododendron simsii HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
TWI32G0287 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
TWI34G0918 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
TAR636G0675 Trochodendron aralioides HOM05D001811 ORTHO05D001738 3.7e-08 60.8 31 100.0
CSS0014115 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 4.9e-08 60.5 31 96.8
TAR383G1022 Trochodendron aralioides HOM05D001811 ORTHO05D001738 4.9e-08 60.5 31 96.8
Dinv23415 Davidia involucrata HOM05D001811 ORTHO05D001738 6.4e-08 60.1 31 96.8
PGR031G3349 Punica granatum HOM05D001811 ORTHO05D001738 6.4e-08 60.1 31 96.8
Haze_18229 Corylus avellana HOM05D001811 ORTHO05D001738 8.3e-08 59.7 31 96.8
QL02p001781 Quercus lobata HOM05D001811 ORTHO05D001738 8.3e-08 59.7 31 96.8
Atru.chr7.2033 Acer truncatum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Aqoxy7G01347 Aquilegia oxysepala HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 93.5
arahy.Tifrunner.gnm1.ann1.4L72G1 Arachis hypogaea HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
arahy.Tifrunner.gnm1.ann1.ZC4720 Arachis hypogaea HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
CANSAT25G2568 Cannabis sativa HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
CAN.G20.7 Capsicum annuum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
CAN.G309.60 Capsicum annuum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Cpa.g.c34418 Carica papaya HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Cpa.g.sc7.201 Carica papaya HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Ca_13195_v3 Cicer arietinum L. HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
ClCG08G016840 Citrullus lanatus HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Ciclev10007888m.g Citrus clementina HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
COL.COLO4_21016 Corchorus olitorius HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
MELO3C010772.2 Cucumis melo HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
CsaV3_2G025780 Cucumis sativus L. HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
DCAR_004452 Daucus carota HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Duzib168G1073 Durio zibethinus HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Duzib187G1443 Durio zibethinus HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Migut.A00162 Erythranthe guttata HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Migut.E01550 Erythranthe guttata HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Eucgr.C00627 Eucalyptus grandis HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Glyma.17G231800 Glycine max HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Gohir.A05G044500 Gossypium hirsutum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Gohir.D05G046100 Gossypium hirsutum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Gorai.009G047500 Gossypium raimondii HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Lj7C695G10 Lonicera japonica HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Lj5g0013160 Lotus japonicus HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Lalb_Chr14g0367931 Lupinus albus HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Lalb_Chr22g0355931 Lupinus albus HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Manes.03G045900 Manihot esculenta HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Medtr1g016980 Medicago truncatula HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Nn6g35375 Nelumbo nucifera HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 93.5
Nitab4.5_0000664g0090 Nicotiana tabacum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Nitab4.5_0001107g0060 Nicotiana tabacum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Nitab4.5_0005029g0050 Nicotiana tabacum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Peaxi162Scf00840g00115 Petunia axillaris HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Phvul.001G032700 Phaseolus vulgaris HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Psat6g019160 Pisum sativum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Sabra06G0182300 Salix brachista HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
SalBow4G1043 Salvia bowleyana HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Sed0009852 Sechium edule HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Sc09g0009590 Simmondsia chinensis HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Solyc08g065890.3 Solanum lycopersicum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Sopen08g019590 Solanum pennellii HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
PGSC0003DMG400018578 Solanum tuberosum HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
THA.LOC104811257 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
TPR.G13050 Trifolium pratense HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
TWI63G1595 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
VMungo0647G1040 Vigna mungo HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
GSVIVG01035335001 Vitis vinifera HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Zm00001eb071930 Zea mays HOM05D001811 ORTHO05D001738 1.1e-07 59.3 31 96.8
Glyma.14G091600 Glycine max HOM05D001811 ORTHO05D001738 1.4e-07 58.9 31 93.5
Nitab4.5_0000359g0230 Nicotiana tabacum HOM05D001811 ORTHO05D001738 1.4e-07 58.9 31 93.5
ATR0705G149 Amborella trichopoda HOM05D001811 ORTHO05D001738 1.9e-07 58.5 31 90.3
EL10Ac2g03951 Beta vulgaris HOM05D001811 ORTHO05D001738 1.9e-07 58.5 31 93.5
AUR62009207 Chenopodium quinoa HOM05D001811 ORTHO05D001738 1.9e-07 58.5 31 93.5
AUR62040198 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.9e-07 58.5 31 93.5
AUR62040204 Chenopodium quinoa HOM05D001811 ORTHO05D001738 1.9e-07 58.5 31 93.5
Thecc.09G050000 Theobroma cacao HOM05D001811 ORTHO05D001738 1.9e-07 58.5 31 93.5
HPP92_007684 Vanilla planifolia HOM05D001811 ORTHO05D001738 1.9e-07 58.5 31 90.3
Aa31LG3G15450 Aethionema arabicum HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
Aa31LG3G15490 Aethionema arabicum HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
AL6G22440 Arabidopsis lyrata HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
AT5G11710 Arabidopsis thaliana HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
BcaC03g13387 Brassica carinata HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
BcaNung02659 Brassica carinata HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
A02p01150 Brassica napus HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
C02p05340 Brassica napus HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
BolC2t06482H Brassica oleracea HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
BraA02t05094Z Brassica rapa HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
Carub.0006s1021 Capsella rubella HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
CARHR201510 Cardamine hirsuta HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
Cfa017920 Carpinus fangiana HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
CiPaw.15G042800 Carya illinoinensis HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
Dinv27955 Davidia involucrata HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
Thhalv10013137m.g Eutrema salsugineum HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
FvH4_2g32320 Fragaria vesca HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
FAN15G1805 Fragaria x ananassa HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
FAN20G0968 Fragaria x ananassa HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
FAN24G0718 Fragaria x ananassa HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
FAN27G1939 Fragaria x ananassa HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
MD15G1062200 Malus domestica HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
Prupe.1G416200 Prunus persica HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
RcHm_v2.0_Chr6g0310371 Rosa chinensis HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
Sp6g31900 Schrenkiella parvula HOM05D001811 ORTHO05D001738 2.4e-07 58.2 31 93.5
CiPaw.16G030700 Carya illinoinensis HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
Gohir.D08G270300 Gossypium hirsutum HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
Gorai.004G288200 Gossypium raimondii HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
MBI02_g35322_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 90.3
Oeu064100.1 Olea europaea HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
Potri.006G234100 Populus trichocarpa HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
Hund03368 Selenicereus undatus HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
Solyc11g070110.3 Solanum lycopersicum HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
Sopen11g028780 Solanum pennellii HOM05D001811 ORTHO05D001738 3.2e-07 57.8 31 93.5
Oeu029399.1 Olea europaea HOM05D001811 ORTHO05D001738 5.4e-07 57.0 31 93.5
SEGI_19767 Sequoiadendron giganteum HOM05D001811 ORTHO05D001738 5.4e-07 57.0 31 90.3
SGA_v2.0_scaffold251G45049 Striga asiatica HOM05D001811 ORTHO05D001738 5.4e-07 57.0 31 93.5
BcaC04g19200 Brassica carinata HOM05D001811 ORTHO05D001738 7.0e-07 56.6 31 90.3
C09p65090 Brassica napus HOM05D000178 ORTHO05D001738 7.0e-07 56.6 31 90.3
BolC9t59338H Brassica oleracea HOM05D001811 ORTHO05D001738 7.0e-07 56.6 31 90.3
CDE02G2395 Ceratophyllum demersum HOM05D001811 ORTHO05D001738 7.0e-07 56.6 31 90.3
Os01g0738600 Oryza sativa ssp. japonica HOM05D001811 ORTHO05D001738 7.0e-07 56.6 31 90.3
MBI01_g10308_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 9.2e-07 56.2 31 87.1
PSO210G1442 Papaver somniferum HOM05D001811 ORTHO05D001738 9.2e-07 56.2 31 87.1
PSO210G4589 Papaver somniferum HOM05D001811 ORTHO05D001738 9.2e-07 56.2 31 87.1
SHI18698 Sapria himalayana HOM05D001811 ORTHO05D001738 9.2e-07 56.2 31 90.3
Gohir.A08G249500 Gossypium hirsutum HOM05D001811 ORTHO05D001738 1.2e-06 55.8 31 90.3
Os04g0599900 Oryza sativa ssp. japonica HOM05D001811 ORTHO05D001738 2.1e-06 55.1 31 87.1
CDE06G0616 Ceratophyllum demersum HOM05D001811 ORTHO05D001738 3.5e-06 54.3 31 87.1
Nn8g38975 Nelumbo nucifera HOM05D001811 ORTHO05D001738 3.5e-06 54.3 31 87.1
A10p26030 Brassica napus HOM05D001811 ORTHO05D001738 6.0e-06 53.5 31 83.9
BraA10t44663Z Brassica rapa HOM05D001811 ORTHO05D001738 7.8e-06 53.1 31 83.9


User provided reference genes

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