Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 5.0e-115 419.5 676 100.0
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 2.6e-71 274.2 673 88.6
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 1.1e-53 215.7 141 75.2
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 4.2e-53 213.8 148 69.6
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 7.9e-52 209.5 153 71.2
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 1.3e-51 208.8 148 68.2
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 2.3e-51 208.0 180 60.6
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 1.6e-49 201.8 170 61.8
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 2.8e-49 201.1 174 60.3
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 5.3e-48 196.8 183 54.6
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 5.3e-48 196.8 192 54.7
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 1.5e-47 195.3 159 62.3
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 2.0e-47 194.9 186 55.9
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 7.6e-47 193.0 563 81.7
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 9.9e-47 192.6 183 53.6
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 1.7e-46 191.8 182 54.9
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 2.9e-46 191.0 174 60.3
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 1.1e-45 189.1 177 54.2
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 1.9e-45 188.3 141 67.4
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 3.2e-45 187.6 190 55.8
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 4.2e-45 187.2 145 64.8
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 7.1e-45 186.4 181 55.2
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 1.6e-44 185.3 149 61.1
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.6e-44 185.3 178 55.6
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 2.1e-44 184.9 179 56.4
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 2.7e-44 184.5 141 66.7
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 4.6e-44 183.7 190 53.2
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 6.0e-44 183.3 147 61.2
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 7.9e-44 183.0 193 50.3
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 1.0e-43 182.6 158 59.5
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 1.0e-43 182.6 186 54.3
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 1.0e-43 182.6 158 59.5
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 1.0e-43 182.6 158 59.5
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 1.0e-43 182.6 181 54.7
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 1.0e-43 182.6 118 71.2
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 1.8e-43 181.8 175 54.9
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 1.8e-43 181.8 186 54.3
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 2.3e-43 181.4 179 54.2
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 3.0e-43 181.0 175 53.7
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 3.0e-43 181.0 184 52.2
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 5.1e-43 180.3 152 60.5
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 6.7e-43 179.9 156 58.3
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 6.7e-43 179.9 139 64.0
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 2.5e-42 177.9 180 54.4
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 3.3e-42 177.6 106 75.5
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 5.6e-42 176.8 139 60.4
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 5.6e-42 176.8 139 60.4
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 7.4e-42 176.4 138 62.3
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.4e-42 176.4 139 60.4
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 1.3e-41 175.6 195 49.7
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 1.3e-41 175.6 142 63.4
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.3e-41 175.6 139 60.4
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.6e-41 175.3 139 59.0
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.6e-41 175.3 139 59.0
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 1.6e-41 175.3 180 55.0
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 2.8e-41 174.5 139 59.7
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 2.8e-41 174.5 158 57.6
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 3.7e-41 174.1 187 51.9
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.4e-40 172.2 175 52.6
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 1.4e-40 172.2 136 64.0
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.8e-40 171.8 175 52.0
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 1.8e-40 171.8 175 52.0
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 2.4e-40 171.4 152 55.3
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 3.1e-40 171.0 160 56.2
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 4.0e-40 170.6 137 58.4
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 1.2e-39 169.1 99 77.8
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 1.2e-39 169.1 99 78.8
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 1.5e-39 168.7 115 67.0
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.6e-39 167.9 193 49.2
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 3.4e-39 167.5 135 63.0
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 3.4e-39 167.5 142 57.7
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 4.5e-39 167.2 104 73.1
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 5.8e-39 166.8 183 52.5
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 7.6e-39 166.4 145 57.2
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 1.0e-38 166.0 139 57.6
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 2.9e-38 164.5 117 67.5
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 3.8e-38 164.1 179 49.7
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 4.2e-37 160.6 154 52.6
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 5.5e-37 160.2 148 58.1
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 5.5e-37 160.2 148 58.1
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 5.5e-37 160.2 133 59.4
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 9.3e-37 159.5 99 73.7
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 9.3e-37 159.5 143 55.2
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 4.6e-36 157.1 204 44.6
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 1.3e-35 155.6 106 65.1
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 7.4e-34 149.8 95 71.6
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 1.1e-26 125.9 69 84.1
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 5.7e-26 123.6 103 58.3
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 5.3e-24 117.1 70 74.3
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 9.0e-24 116.3 70 72.9
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 1.1e-21 109.4 71 70.4
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 1.1e-21 109.4 102 46.1
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 1.1e-21 109.4 102 46.1
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 2.5e-21 108.2 101 48.5
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 9.4e-21 106.3 64 71.9
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 1.4e-19 102.4 149 45.6
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 6.7e-19 100.1 101 48.5
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 3.3e-18 97.8 70 62.9
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 4.4e-18 97.4 144 38.2
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.1e-16 92.8 70 58.6
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 3.2e-13 81.3 53 66.0
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 4.2e-13 80.9 59 62.7
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 9.7e-10 69.7 38 84.2
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.2e-06 58.5 72 45.8
CANSAT78G2316 Cannabis sativa HOM05D002479 ORTHO05D002675 2.9e-06 58.2 61 34.4
Rhsim05G0175800 Rhododendron simsii HOM05D002479 ORTHO05D002675 6.5e-06 57.0 107 27.1


User provided reference genes

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