Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 1.6e-199 699.1 336 100.0
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 7.7e-141 504.2 282 83.3
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 2.1e-114 416.4 284 66.5
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.8e-113 413.3 281 66.5
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.2e-112 410.6 281 66.5
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 7.5e-112 407.9 280 65.0
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 9.8e-112 407.5 287 66.6
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 3.7e-111 405.6 278 64.4
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.1e-110 404.1 279 65.9
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 4.1e-110 402.1 281 66.9
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 4.1e-110 402.1 279 65.6
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 4.5e-109 398.7 326 58.9
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.3e-108 396.4 277 66.1
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 4.2e-107 392.1 281 64.4
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 7.2e-107 391.3 291 61.9
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 9.5e-107 391.0 281 64.4
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 1.2e-106 390.6 276 65.9
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 6.1e-106 388.3 276 64.1
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 8.0e-106 387.9 280 64.6
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.4e-105 387.1 280 63.6
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 1.8e-105 386.7 279 62.4
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 2.3e-105 386.3 285 61.4
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 3.0e-105 386.0 273 64.5
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.6e-104 382.9 287 61.0
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 3.4e-104 382.5 276 62.3
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.8e-103 379.4 273 62.3
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 6.3e-103 378.3 271 61.6
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.1e-102 377.5 299 58.2
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 3.1e-102 375.9 275 60.7
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.0e-101 373.2 280 61.8
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 2.7e-101 372.9 267 62.2
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 4.5e-101 372.1 285 59.6
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 1.3e-100 370.5 281 60.9
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.9e-100 369.0 301 57.5
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 4.3e-99 365.5 286 58.4
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 8.0e-98 361.3 281 60.5
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.0e-97 360.9 278 59.4
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 3.1e-97 359.4 281 59.8
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 3.1e-97 359.4 279 60.2
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 3.1e-97 359.4 279 60.2
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 4.0e-97 359.0 285 57.9
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 6.8e-97 358.2 281 60.1
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 3.4e-96 355.9 279 59.5
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 7.5e-96 354.8 274 61.3
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 9.8e-96 354.4 279 59.1
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 1.2e-93 347.4 237 67.5
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 1.6e-93 347.1 261 60.5
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.6e-93 347.1 280 58.6
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.1e-91 340.9 243 63.0
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.6e-90 335.9 280 58.2
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 3.6e-90 335.9 282 56.4
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.8e-89 333.6 278 56.8
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.5e-88 330.5 234 62.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 3.4e-88 329.3 276 56.9
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.2e-87 326.6 278 51.4
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 3.7e-87 325.9 277 57.0
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 2.7e-85 319.7 272 53.3
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 4.7e-82 308.9 243 60.1
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.4e-81 307.4 259 55.6
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 6.8e-81 305.1 253 61.3
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 7.3e-75 285.0 275 47.3
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.6e-74 283.9 321 46.7
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 5.2e-73 278.9 223 59.2
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 3.4e-72 276.2 219 58.0
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 3.8e-71 272.7 212 59.4
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 2.1e-69 266.9 240 56.7
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 2.4e-62 243.4 276 44.2
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.6e-61 240.7 275 41.5
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.0e-60 238.0 271 41.0
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 5.6e-59 232.3 213 52.6
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 7.3e-59 231.9 371 37.7
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.6e-58 230.7 273 38.8
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 6.4e-55 218.8 228 50.4
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 1.4e-54 217.6 217 47.5
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.1e-38 164.9 110 61.8
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 2.3e-36 157.1 107 68.2
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.0e-28 131.7 148 45.3
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 2.0e-24 117.5 260 30.8
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.4e-22 111.3 62 75.8
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.8e-20 104.4 173 37.0
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 1.5e-16 91.3 66 65.2
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 4.1e-09 66.6 41 65.9
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 8.5e-07 58.9 114 28.9
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.1e-06 58.5 44 54.5


User provided reference genes

Program Settings