Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0446461 Helianthus annuus HOM05D003767 ORTHO05D004507 9.3e-130 466.8 231 100.0
ECA238G2357 Erigeron canadensis HOM05D003767 ORTHO05D004507 1.2e-113 413.3 217 93.5
HanXRQChr10g0295061 Helianthus annuus HOM05D003767 ORTHO05D004507 2.1e-113 412.5 217 92.6
ECA238G1346 Erigeron canadensis HOM05D003767 ORTHO05D004507 3.4e-108 395.2 217 89.4
Lsat_1_v5_gn_2_64341 Lactuca sativa HOM05D003767 ORTHO05D004507 2.5e-106 389.0 214 90.7
QL03p004251 Quercus lobata HOM05D003767 ORTHO05D004507 6.1e-105 384.4 230 77.8
GSVIVG01022056001 Vitis vinifera HOM05D003767 ORTHO05D004507 1.0e-104 383.6 215 84.7
Gohir.A11G224810 Gossypium hirsutum HOM05D003767 ORTHO05D004507 1.8e-104 382.9 215 84.7
Duzib147G0043 Durio zibethinus HOM05D003767 ORTHO05D004507 3.9e-104 381.7 217 82.5
Gorai.003G066300 Gossypium raimondii HOM05D003767 ORTHO05D004507 5.2e-104 381.3 215 84.2
CSS0007130 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 2.0e-103 379.4 214 84.6
Gohir.D11G232600 Gossypium hirsutum HOM05D003767 ORTHO05D004507 5.7e-103 377.9 215 83.7
Rhsim07G0179200 Rhododendron simsii HOM05D003767 ORTHO05D004507 7.4e-103 377.5 214 83.2
Thecc.02G212900 Theobroma cacao HOM05D003767 ORTHO05D004507 9.7e-103 377.1 217 81.1
Lj9A681G36 Lonicera japonica HOM05D003767 ORTHO05D004507 1.3e-102 376.7 215 84.2
Potri.013G026800 Populus trichocarpa HOM05D003767 ORTHO05D004507 1.3e-102 376.7 215 81.9
COL.COLO4_12128 Corchorus olitorius HOM05D003767 ORTHO05D004507 1.7e-102 376.3 217 81.6
Sed0026847 Sechium edule HOM05D003767 ORTHO05D004507 6.3e-102 374.4 217 79.7
Eucgr.H04452 Eucalyptus grandis HOM05D003767 ORTHO05D004507 8.2e-102 374.0 215 82.3
RhsimUnG0080300 Rhododendron simsii HOM05D003767 ORTHO05D004507 8.2e-102 374.0 214 81.8
Atru.chr2.496 Acer truncatum HOM05D003767 ORTHO05D004507 4.1e-101 371.7 215 80.5
Sc09g0003380 Simmondsia chinensis HOM05D003767 ORTHO05D004507 4.1e-101 371.7 216 80.1
AUR62000859 Chenopodium quinoa HOM05D003767 ORTHO05D004507 7.0e-101 370.9 217 80.6
Potri.005G038100 Populus trichocarpa HOM05D003767 ORTHO05D004507 7.0e-101 370.9 215 80.0
FAN09G3025 Fragaria x ananassa HOM05D003767 ORTHO05D004507 9.1e-101 370.5 217 80.2
Actinidia23606 Actinidia chinensis HOM05D003767 ORTHO05D004507 1.6e-100 369.8 212 82.1
CANSAT54G0870 Cannabis sativa HOM05D003767 ORTHO05D004507 2.6e-100 369.0 225 78.2
MELO3C015345.2 Cucumis melo HOM05D003767 ORTHO05D004507 2.6e-100 369.0 217 79.3
Ah.06g190170 Amaranthus hybridus HOM05D003767 ORTHO05D004507 4.5e-100 368.2 215 78.6
TAR365G0614 Trochodendron aralioides HOM05D003767 ORTHO05D004507 4.5e-100 368.2 215 82.8
Manes.09G162900 Manihot esculenta HOM05D003767 ORTHO05D004507 5.9e-100 367.9 215 80.9
Cpa.g.sc48.5 Carica papaya HOM05D003767 ORTHO05D004507 7.7e-100 367.5 215 80.5
FvH4_6g05260 Fragaria vesca HOM05D003767 ORTHO05D004507 1.0e-99 367.1 215 80.0
FAN14G0860 Fragaria x ananassa HOM05D003767 ORTHO05D004507 1.0e-99 367.1 215 80.0
FAN14G3644 Fragaria x ananassa HOM05D003767 ORTHO05D004507 1.0e-99 367.1 215 80.0
Hund07038 Selenicereus undatus HOM05D003767 ORTHO05D004507 2.2e-99 365.9 212 80.7
RcHm_v2.0_Chr3g0453991 Rosa chinensis HOM05D003767 ORTHO05D004507 2.9e-99 365.5 217 79.3
Ciclev10000728m.g Citrus clementina HOM05D003767 ORTHO05D004507 3.8e-99 365.2 215 80.5
AUR62005115 Chenopodium quinoa HOM05D003767 ORTHO05D004507 6.5e-99 364.4 217 78.8
Sabra05G0038000 Salix brachista HOM05D003767 ORTHO05D004507 8.5e-99 364.0 215 78.6
Cfa006539 Carpinus fangiana HOM05D003767 ORTHO05D004507 3.2e-98 362.1 215 79.5
vmacro05036 Vaccinium macrocarpon HOM05D003767 ORTHO05D004507 3.2e-98 362.1 214 80.8
FAN05G2944 Fragaria x ananassa HOM05D003767 ORTHO05D004507 5.5e-98 361.3 215 79.1
Prupe.6G331000 Prunus persica HOM05D003767 ORTHO05D004507 1.2e-97 360.1 215 79.1
EL10Ac4g09299 Beta vulgaris HOM05D003767 ORTHO05D004507 1.6e-97 359.8 216 77.3
CiPaw.08G167300 Carya illinoinensis HOM05D003767 ORTHO05D004507 3.6e-97 358.6 215 78.1
DCAR_002932 Daucus carota HOM05D003767 ORTHO05D004507 3.6e-97 358.6 217 77.4
Oeu027914.1 Olea europaea HOM05D003767 ORTHO05D004507 3.6e-97 358.6 215 77.2
DCAR_005538 Daucus carota HOM05D003767 ORTHO05D004507 4.7e-97 358.2 217 77.4
FAN05G1904 Fragaria x ananassa HOM05D003767 ORTHO05D004507 4.7e-97 358.2 224 76.3
MD12G1224500 Malus domestica HOM05D003767 ORTHO05D004507 6.1e-97 357.8 217 78.3
Hma1.2p1_0666F.1_g199390 Hydrangea macrophylla HOM05D003767 ORTHO05D004507 8.0e-97 357.5 213 79.8
DCAR_029443 Daucus carota HOM05D003767 ORTHO05D004507 1.4e-96 356.7 217 76.5
Glyma.19G237900 Glycine max HOM05D003767 ORTHO05D004507 2.3e-96 355.9 217 77.9
TWI56G0745 Tripterygium wilfordii HOM05D003767 ORTHO05D004507 2.3e-96 355.9 214 77.6
CSS0005723 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 3.0e-96 355.5 208 80.3
Lalb_Chr15g0077051 Lupinus albus HOM05D003767 ORTHO05D004507 3.0e-96 355.5 223 76.7
Thhalv10003956m.g Eutrema salsugineum HOM05D003767 ORTHO05D004507 4.0e-96 355.1 215 79.1
Manes.08G123500 Manihot esculenta HOM05D003767 ORTHO05D004507 5.2e-96 354.8 215 75.8
Medtr7g113890 Medicago truncatula HOM05D003767 ORTHO05D004507 5.2e-96 354.8 217 76.5
Cc02_g32590 Coffea canephora HOM05D003767 ORTHO05D004507 6.7e-96 354.4 223 75.8
CSS0020414 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 8.8e-96 354.0 208 79.8
CARHR185970 Cardamine hirsuta HOM05D003767 ORTHO05D004507 1.5e-95 353.2 217 77.0
arahy.Tifrunner.gnm1.ann1.1T3PYK Arachis hypogaea HOM05D003767 ORTHO05D004507 2.6e-95 352.4 215 78.1
PGSC0003DMG400028599 Solanum tuberosum HOM05D003767 ORTHO05D004507 3.3e-95 352.1 223 75.8
arahy.Tifrunner.gnm1.ann1.RYM43V Arachis hypogaea HOM05D003767 ORTHO05D004507 4.4e-95 351.7 215 78.1
MD04G1210100 Malus domestica HOM05D003767 ORTHO05D004507 4.4e-95 351.7 212 78.3
Migut.F01584 Erythranthe guttata HOM05D003767 ORTHO05D004507 5.7e-95 351.3 215 77.2
Psat3g009360 Pisum sativum HOM05D003767 ORTHO05D004507 5.7e-95 351.3 217 77.0
Aqoxy5G00559 Aquilegia oxysepala HOM05D003767 ORTHO05D004507 7.5e-95 350.9 215 79.1
Sp2g20600 Schrenkiella parvula HOM05D003767 ORTHO05D004507 7.5e-95 350.9 215 77.2
Sopen01g042160 Solanum pennellii HOM05D003767 ORTHO05D004507 7.5e-95 350.9 223 75.8
BcaNung02467 Brassica carinata HOM05D003767 ORTHO05D004507 9.7e-95 350.5 217 76.0
BcaNung04364 Brassica carinata HOM05D003767 ORTHO05D004507 9.7e-95 350.5 217 76.0
C07p40700 Brassica napus HOM05D003767 ORTHO05D004507 9.7e-95 350.5 217 76.0
BolC7t44598H Brassica oleracea HOM05D003767 ORTHO05D004507 9.7e-95 350.5 217 76.0
Aa31LG11G9150 Aethionema arabicum HOM05D003767 ORTHO05D004507 1.3e-94 350.1 217 77.0
A06p37610 Brassica napus HOM05D003767 ORTHO05D004507 2.2e-94 349.4 217 75.6
BraA06t26680Z Brassica rapa HOM05D003767 ORTHO05D004507 2.2e-94 349.4 217 75.6
CAN.G1134.12 Capsicum annuum HOM05D003767 ORTHO05D004507 2.2e-94 349.4 215 77.2
Solyc01g098610.4 Solanum lycopersicum HOM05D003767 ORTHO05D004507 2.2e-94 349.4 223 75.3
PGR031G1040 Punica granatum HOM05D003767 ORTHO05D004507 6.3e-94 347.8 215 74.9
TPR.G33164 Trifolium pratense HOM05D003767 ORTHO05D004507 1.4e-93 346.7 217 76.0
Phvul.006G094700 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 1.8e-93 346.3 218 75.2
BcaB04g19665 Brassica carinata HOM05D003767 ORTHO05D004507 2.4e-93 345.9 230 71.3
PSO832G1867 Papaver somniferum HOM05D003767 ORTHO05D004507 2.4e-93 345.9 215 76.7
VMungo0540G2084 Vigna mungo HOM05D003767 ORTHO05D004507 3.1e-93 345.5 218 77.1
C09p05700 Brassica napus HOM05D003767 ORTHO05D004507 5.3e-93 344.7 215 74.4
Lj1g0009738 Lotus japonicus HOM05D003767 ORTHO05D004507 7.0e-93 344.4 217 74.7
Phvul.006G094600 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 9.1e-93 344.0 217 74.7
Nitab4.5_0004940g0030 Nicotiana tabacum HOM05D003767 ORTHO05D004507 1.2e-92 343.6 215 77.7
SGA_v2.0_scaffold13G06464 Striga asiatica HOM05D003767 ORTHO05D004507 1.6e-92 343.2 216 76.9
BcaC04g23683 Brassica carinata HOM05D003767 ORTHO05D004507 2.0e-92 342.8 215 74.0
BolC9t53499H Brassica oleracea HOM05D003767 ORTHO05D004507 2.0e-92 342.8 215 74.0
Lalb_Chr18g0045501 Lupinus albus HOM05D003767 ORTHO05D004507 2.7e-92 342.4 217 74.2
Peaxi162Scf00434g00336 Petunia axillaris HOM05D003767 ORTHO05D004507 2.7e-92 342.4 215 75.8
PSO210G1178 Papaver somniferum HOM05D003767 ORTHO05D004507 3.5e-92 342.0 215 76.3
Glyma.19G237800 Glycine max HOM05D003767 ORTHO05D004507 4.5e-92 341.7 217 73.7
A09p05240 Brassica napus HOM05D003767 ORTHO05D004507 5.9e-92 341.3 215 74.0
BraA09t36163Z Brassica rapa HOM05D003767 ORTHO05D004507 5.9e-92 341.3 215 74.0
THA.LOC104821704 Tarenaya hassleriana HOM05D003767 ORTHO05D004507 5.9e-92 341.3 215 75.8
Lj1g0000488 Lotus japonicus HOM05D003767 ORTHO05D004507 7.7e-92 340.9 217 71.9
Os11g0642800 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 1.0e-91 340.5 216 74.1
MSTRG.8108 Avicennia marina HOM05D003767 ORTHO05D004507 1.7e-91 339.7 215 74.4
AT5G27380 Arabidopsis thaliana HOM05D003767 ORTHO05D004507 3.8e-91 338.6 213 75.1
Os12g0528400 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 5.0e-91 338.2 216 73.6
AL6G39640 Arabidopsis lyrata HOM05D003767 ORTHO05D004507 6.5e-91 337.8 215 74.4
HPP92_001826 Vanilla planifolia HOM05D003767 ORTHO05D004507 6.5e-91 337.8 215 74.4
Ca_09376_v3 Cicer arietinum L. HOM05D003767 ORTHO05D004507 1.1e-90 337.0 215 74.9
Nitab4.5_0001423g0150 Nicotiana tabacum HOM05D003767 ORTHO05D004507 1.9e-90 336.3 215 75.8
VMungo0540G0577 Vigna mungo HOM05D003767 ORTHO05D004507 5.5e-90 334.7 217 71.9
Actinidia05727 Actinidia chinensis HOM05D003767 ORTHO05D004507 1.2e-89 333.6 193 82.4
Carub.0006s2517 Capsella rubella HOM05D003767 ORTHO05D004507 1.2e-89 333.6 215 72.1
Aqoxy2G03198 Aquilegia oxysepala HOM05D003767 ORTHO05D004507 1.6e-89 333.2 217 74.7
Ca_09375_v3 Cicer arietinum L. HOM05D003767 ORTHO05D004507 1.6e-89 333.2 217 71.4
Medtr7g113880 Medicago truncatula HOM05D003767 ORTHO05D004507 2.1e-89 332.8 217 71.4
Zm00001eb115490 Zea mays HOM05D003767 ORTHO05D004507 2.1e-89 332.8 216 73.6
Phvul.006G094500 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 2.7e-89 332.4 217 71.4
Zm00001eb137820 Zea mays HOM05D003767 ORTHO05D004507 6.1e-89 331.3 214 73.4
SalBow6G1775 Salvia bowleyana HOM05D003767 ORTHO05D003551 2.3e-88 329.3 205 76.1
ClCG03G016760 Citrullus lanatus HOM05D003767 ORTHO05D004507 3.0e-88 328.9 297 56.6
Glyma.19G237700 Glycine max HOM05D003767 ORTHO05D004507 4.0e-88 328.6 217 70.5
Psat3g009920 Pisum sativum HOM05D003767 ORTHO05D004507 4.0e-88 328.6 217 70.5
Glyma.03G240600 Glycine max HOM05D003767 ORTHO05D004507 6.8e-88 327.8 217 70.5
TPR.G33204 Trifolium pratense HOM05D003767 ORTHO05D004507 8.8e-88 327.4 217 70.0
ATR0626G007 Amborella trichopoda HOM05D003767 ORTHO05D004507 1.5e-87 326.6 212 73.6
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 7.5e-87 324.3 215 69.8
Os12g0263000 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 7.7e-84 314.3 217 68.2
MBI17_g18114_MAGBIO Magnolia biondii HOM05D003767 ORTHO05D004507 2.9e-83 312.4 265 62.3
Nn1g08367 Nelumbo nucifera HOM05D003767 ORTHO05D004507 1.4e-77 293.5 171 80.1
SMO271G0026 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 1.4e-77 293.5 218 66.5
Mapoly0002s0041 Marchantia polymorpha HOM05D003767 ORTHO05D004507 4.3e-74 282.0 220 62.7
Pp3c1_36280 Physcomitrium patens HOM05D003767 ORTHO05D004507 9.2e-69 264.2 217 59.9
Cre17.g708800 Chlamydomonas reinhardtii HOM05D003767 ORTHO05D004507 1.4e-64 250.4 226 57.1
MCO07G639 Micromonas commoda HOM05D003767 ORTHO05D004507 4.7e-57 225.3 213 52.1
PRCOL_00004575 Prasinoderma coloniale HOM05D003767 ORTHO05D004507 6.2e-57 224.9 217 54.8
Eucgr.H04446 Eucalyptus grandis HOM05D003767 ORTHO05D004507 1.1e-48 197.6 114 80.7
SMO304G0030 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 8.9e-48 194.5 203 54.2
CDE02G2107 Ceratophyllum demersum HOM05D000488 ORTHO05D000347 2.1e-44 183.3 124 71.0
Nn1g02104 Nelumbo nucifera HOM05D003767 ORTHO05D004507 2.1e-44 183.3 124 66.9
Actinidia24503 Actinidia chinensis HOM05D003767 ORTHO05D004507 5.1e-43 178.7 134 67.2
CBR_g15993 Chara braunii HOM05D003767 ORTHO05D004507 1.2e-36 157.5 156 51.3
Cfa024552 Carpinus fangiana HOM05D003767 ORTHO05D004507 4.6e-36 155.6 220 41.8
CAN.G299.1 Capsicum annuum HOM05D003767 ORTHO05D004507 1.5e-31 140.6 88 72.7
TAR636G1925 Trochodendron aralioides HOM05D003767 ORTHO05D004507 7.1e-29 131.7 76 80.3
TAR636G2499 Trochodendron aralioides HOM05D003767 ORTHO05D004507 2.3e-27 126.7 77 80.5
CSS0000499 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 5.6e-26 122.1 63 87.3
CsaV3_1G039210 Cucumis sativus L. HOM05D003767 ORTHO05D004507 8.1e-25 118.2 64 79.7
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 1.3e-22 110.9 78 66.7
RcHm_v2.0_Chr2g0172961 Rosa chinensis HOM05D003767 ORTHO05D004507 2.9e-22 109.8 64 78.1
CAN.G73.7 Capsicum annuum HOM05D003767 ORTHO05D000047 2.1e-17 93.6 53 77.4
SEGI_31082 Sequoiadendron giganteum HOM05D003767 ORTHO05D004507 5.8e-15 85.5 47 78.7
BolC5t32099H Brassica oleracea HOM05D003767 ORTHO05D041347 2.9e-14 83.2 61 67.2
C05p33690 Brassica napus HOM05D003767 ORTHO05D041347 1.9e-13 80.5 46 78.3
RcHm_v2.0_Chr2g0172951 Rosa chinensis HOM05D003767 ORTHO05D004507 1.0e-11 74.7 51 64.7
SMO164G0207 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 8.7e-11 71.6 110 41.8
SMO304G0024 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 1.9e-10 70.5 156 35.9
Psat1g075760 Pisum sativum HOM05D003767 ORTHO05D004507 2.5e-10 70.1 44 75.0
SMO164G0195 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 1.5e-07 60.8 157 31.2


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