Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0445111 Helianthus annuus HOM05D004392 ORTHO05D004846 1.1e-173 613.2 306 100.0
HanXRQChr11g0352941 Helianthus annuus HOM05D004392 ORTHO05D004846 7.2e-138 494.2 277 90.3
HanXRQChr11g0352951 Helianthus annuus HOM05D004392 ORTHO05D004846 7.2e-138 494.2 277 90.3
Lsat_1_v5_gn_3_140700 Lactuca sativa HOM05D004392 ORTHO05D004846 5.6e-122 441.4 278 81.7
ECA233G3878 Erigeron canadensis HOM05D004392 ORTHO05D004846 1.6e-116 423.3 276 80.4
Dinv34257 Davidia involucrata HOM05D004392 ORTHO05D004846 3.1e-104 382.5 286 69.6
vmacro00026 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 8.9e-104 380.9 285 69.5
Rhsim07G0000300 Rhododendron simsii HOM05D004392 ORTHO05D004846 3.4e-103 379.0 286 69.2
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 9.9e-103 377.5 284 68.0
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 9.9e-103 377.5 286 67.5
CSS0009785 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 4.9e-102 375.2 286 67.8
CSS0004566 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 6.4e-102 374.8 286 67.8
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 6.4e-102 374.8 289 67.5
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 6.4e-102 374.8 277 69.7
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 1.1e-101 374.0 277 69.3
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 2.4e-101 372.9 288 67.4
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 3.2e-101 372.5 277 69.7
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 4.1e-101 372.1 286 65.7
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 5.4e-101 371.7 277 68.6
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 5.4e-101 371.7 277 68.6
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 5.4e-101 371.7 286 67.5
Actinidia08006 Actinidia chinensis HOM05D004392 ORTHO05D004846 7.1e-101 371.3 286 68.9
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 9.2e-101 370.9 289 66.8
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.2e-100 370.5 277 68.6
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 1.6e-100 370.2 277 68.6
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 3.5e-100 369.0 277 67.5
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 4.6e-100 368.6 277 68.6
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 1.3e-99 367.1 287 67.2
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.7e-99 366.7 286 66.4
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 1.7e-99 366.7 275 69.1
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 1.7e-99 366.7 286 66.1
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 2.3e-99 366.3 280 67.9
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 3.0e-99 365.9 286 65.0
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 3.9e-99 365.5 286 66.4
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 6.6e-99 364.8 284 67.6
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 1.1e-98 364.0 275 68.7
QL10p065016 Quercus lobata HOM05D004392 ORTHO05D004846 1.1e-98 364.0 291 63.9
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 2.5e-98 362.8 285 65.6
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 4.3e-98 362.1 277 67.5
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 7.3e-98 361.3 277 67.5
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 1.6e-97 360.1 286 66.1
TAR629G2483 Trochodendron aralioides HOM05D004392 ORTHO05D004846 2.1e-97 359.8 284 66.5
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 8.1e-97 357.8 277 66.8
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 1.1e-96 357.5 274 66.8
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 1.1e-96 357.5 276 65.6
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 1.4e-96 357.1 283 64.7
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 1.4e-96 357.1 277 66.8
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 1.8e-96 356.7 279 67.0
Nn3g18803 Nelumbo nucifera HOM05D004392 ORTHO05D004846 6.8e-96 354.8 289 65.7
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 6.8e-96 354.8 269 66.2
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 1.2e-95 354.0 293 65.2
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 1.5e-95 353.6 277 66.4
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 2.0e-95 353.2 279 66.7
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea HOM05D004392 ORTHO05D004846 2.0e-95 353.2 279 66.7
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 3.4e-95 352.4 277 66.1
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 1.3e-94 350.5 279 66.3
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 3.8e-94 349.0 285 64.2
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 8.4e-94 347.8 279 66.3
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 1.1e-93 347.4 277 63.2
THA.LOC104801349 Tarenaya hassleriana HOM05D004392 ORTHO05D004846 3.2e-93 345.9 277 62.5
DCAR_013954 Daucus carota HOM05D004392 ORTHO05D004846 1.6e-92 343.6 281 64.1
Migut.B01921 Erythranthe guttata HOM05D004392 ORTHO05D004846 1.6e-92 343.6 280 61.1
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 1.6e-92 343.6 286 62.9
CAN.G929.34 Capsicum annuum HOM05D004392 ORTHO05D004846 2.7e-92 342.8 295 60.0
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 3.5e-92 342.4 278 62.2
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 3.5e-92 342.4 302 62.9
SalBow3G1181 Salvia bowleyana HOM05D004392 ORTHO05D004846 4.6e-92 342.0 280 61.1
Nitab4.5_0011074g0010 Nicotiana tabacum HOM05D004392 ORTHO05D004846 7.8e-92 341.3 286 61.5
Sopen05g026910 Solanum pennellii HOM05D004392 ORTHO05D004846 1.7e-91 340.1 295 60.0
Cpa.g.sc193.6 Carica papaya HOM05D004392 ORTHO05D004846 3.0e-91 339.3 274 64.2
Solyc05g044610.3 Solanum lycopersicum HOM05D004392 ORTHO05D004846 6.6e-91 338.2 295 59.3
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 1.5e-90 337.0 277 61.7
MSTRG.17382 Avicennia marina HOM05D004392 ORTHO05D004846 1.5e-90 337.0 280 61.4
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 3.3e-90 335.9 288 60.8
CDE02G2120 Ceratophyllum demersum HOM05D004392 ORTHO05D004846 3.3e-90 335.9 275 61.8
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 4.3e-90 335.5 277 61.7
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 5.6e-90 335.1 277 61.7
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 5.6e-90 335.1 277 61.7
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 1.6e-89 333.6 291 60.5
Nitab4.5_0000006g0150 Nicotiana tabacum HOM05D004392 ORTHO05D004846 3.6e-89 332.4 298 59.1
AT4G00800 Arabidopsis thaliana HOM05D004392 ORTHO05D004846 8.1e-89 331.3 277 60.6
Sed0010760 Sechium edule HOM05D004392 ORTHO05D004846 8.1e-89 331.3 277 60.6
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 1.8e-88 330.1 286 61.5
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 2.4e-88 329.7 277 61.0
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 2.4e-88 329.7 277 61.0
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 2.4e-88 329.7 277 61.0
AL6G52660 Arabidopsis lyrata HOM05D004392 ORTHO05D004846 3.1e-88 329.3 277 60.6
Hma1.2p1_0074F.1_g038700 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 4.0e-88 328.9 264 65.5
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 5.3e-88 328.6 277 60.6
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 1.2e-87 327.4 277 60.6
Carub.0006s3583 Capsella rubella HOM05D004392 ORTHO05D004846 1.3e-86 323.9 277 59.6
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 1.3e-86 323.9 335 54.3
PSO782G2296 Papaver somniferum HOM05D004392 ORTHO05D004846 3.8e-86 322.4 275 58.9
Peaxi162Scf00462g00512 Petunia axillaris HOM05D004392 ORTHO05D004846 3.8e-86 322.4 286 59.4
PSO063G6286 Papaver somniferum HOM05D004392 ORTHO05D004846 8.4e-86 321.2 275 58.9
SGA_v2.0_scaffold98G29423 Striga asiatica HOM05D004392 ORTHO05D004846 8.4e-86 321.2 271 60.1
ATR0304G014 Amborella trichopoda HOM05D004392 ORTHO05D004846 1.1e-85 320.9 273 61.5
Lj9C607G8 Lonicera japonica HOM05D004392 ORTHO05D004846 1.2e-84 317.4 271 62.0
HPP92_014634 Vanilla planifolia HOM05D004392 ORTHO05D004846 1.0e-83 314.3 274 58.8
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 1.5e-82 310.5 293 58.4
SHI29621 Sapria himalayana HOM05D004392 ORTHO05D004846 1.6e-81 307.0 305 53.8
ClCG05G000190 Citrullus lanatus HOM05D004392 ORTHO05D004846 2.4e-80 303.1 270 58.1
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 1.5e-79 300.4 245 64.1
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 3.5e-76 289.3 274 57.3
Zm00001eb230740 Zea mays HOM05D004392 ORTHO05D004846 7.9e-76 288.1 282 54.3
SEGI_06399 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 7.4e-74 281.6 275 53.8
CAN.G929.32 Capsicum annuum HOM05D004392 ORTHO05D004846 3.7e-65 252.7 205 61.0
Mapoly0063s0095 Marchantia polymorpha HOM05D004392 ORTHO05D004846 3.7e-65 252.7 297 46.8
SalBow3G3735 Salvia bowleyana HOM05D004392 ORTHO05D004846 4.2e-61 239.2 250 50.8
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis HOM05D004392 ORTHO05D004846 3.3e-58 229.6 298 42.3
unitig_736.g22806 Utricularia gibba HOM05D004392 ORTHO05D004846 4.8e-57 225.7 262 46.2
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 7.7e-55 218.4 270 43.3
Pp3c17_2710 Physcomitrium patens HOM05D004392 ORTHO05D004846 2.9e-54 216.5 294 41.8
CAN.G1674.1 Capsicum annuum HOM05D004392 ORTHO05D004846 7.9e-52 208.4 222 50.9
Pp3c7_20800 Physcomitrium patens HOM05D004392 ORTHO05D004846 1.8e-51 207.2 302 41.1
CBR_g34692 Chara braunii HOM05D004392 ORTHO05D004846 2.4e-48 196.8 361 36.0
HanXRQChr14g0436131 Helianthus annuus HOM05D004392 ORTHO05D004846 2.5e-21 107.1 55 92.7
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 3.6e-20 103.2 69 71.0
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 5.2e-19 99.4 67 68.7
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 2.0e-18 97.4 65 69.2
Cc00_g00890 Coffea canephora HOM05D004392 ORTHO05D004846 5.0e-14 82.8 238 31.9
Psat0s2140g0040 Pisum sativum HOM05D004392 ORTHO05D004846 8.6e-14 82.0 89 55.1
BcaB01g02314 Brassica carinata HOM05D004392 ORTHO05D004846 7.5e-10 68.9 63 57.1
Ah.07g200480 Amaranthus hybridus HOM05D004392 ORTHO05D004846 4.6e-07 59.7 71 46.5


User provided reference genes

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