Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0443421 Helianthus annuus HOM05D011604 ORTHO05D012513 1.0e-126 456.8 240 100.0
Lsat_1_v5_gn_7_106561 Lactuca sativa HOM05D001309 ORTHO05D000385 1.2e-63 247.3 214 63.1
Lsat_1_v5_gn_4_141161 Lactuca sativa HOM05D001309 ORTHO05D000385 1.0e-62 244.2 222 57.7
ECA247G2753 Erigeron canadensis HOM05D000006 ORTHO05D000062 8.7e-46 188.0 229 45.0
Lsat_1_v5_gn_7_106640 Lactuca sativa HOM05D011604 ORTHO05D012513 2.1e-39 166.8 129 69.8
HanXRQChr16g0513901 Helianthus annuus HOM05D001309 ORTHO05D012513 9.0e-27 124.8 70 91.4
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-25 120.9 247 35.2
Lsat_1_v5_gn_1_108060 Lactuca sativa HOM05D011604 ORTHO05D012513 1.7e-25 120.6 127 49.6
Lsat_1_v5_gn_7_21840 Lactuca sativa HOM05D008309 ORTHO05D012513 3.2e-24 116.3 125 52.8
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.2e-23 114.4 245 34.3
TPR.G24473 Trifolium pratense HOM05D024240 ORTHO05D000385 1.2e-23 114.4 200 35.0
ECA236G2738 Erigeron canadensis HOM05D001309 ORTHO05D000385 1.7e-20 104.0 186 36.6
COL.COLO4_09996 Corchorus olitorius HOM05D011604 ORTHO05D012513 4.8e-20 102.4 210 32.4
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 3.1e-19 99.8 186 37.6
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 6.9e-19 98.6 167 38.9
Ca_12196_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 2.0e-18 97.1 124 42.7
Lj4g0009512 Lotus japonicus HOM05D001309 ORTHO05D000385 5.5e-16 89.0 206 30.1
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.1e-15 87.0 163 37.4
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 6.1e-15 85.5 215 29.8
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 8.8e-14 81.6 130 38.5
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 1.1e-13 81.3 163 32.5
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.1e-13 81.3 169 33.7
ECA233G5561 Erigeron canadensis HOM05D011604 ORTHO05D012513 4.4e-13 79.3 88 47.7
ECA238G0557 Erigeron canadensis HOM05D001309 ORTHO05D000385 5.7e-13 79.0 62 59.7
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.8e-12 75.9 160 34.4
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 4.8e-12 75.9 160 34.4
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-12 75.9 228 27.2
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-11 74.7 173 32.4
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-11 74.7 173 31.8
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-11 74.7 173 32.4
COL.COLO4_19845 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.1e-11 74.7 198 29.3
COL.COLO4_28315 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.1e-11 74.7 235 27.7
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.1e-11 74.7 160 34.4
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.8e-11 73.9 168 31.5
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-11 73.9 173 32.4
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-11 73.9 173 32.4
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.8e-11 73.9 205 30.2
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-11 73.2 173 31.8
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-11 73.2 179 30.2
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.3e-11 72.4 173 31.8
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 6.9e-11 72.0 166 34.9
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 6.9e-11 72.0 164 34.1
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 9.1e-11 71.6 168 30.4
ECA240G1654 Erigeron canadensis HOM05D005763 ORTHO05D005970 1.2e-10 71.2 122 36.9
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.2e-10 71.2 166 36.1
Zm00001eb182790 Zea mays HOM05D008576 ORTHO05D000385 1.5e-10 70.9 184 31.0
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.0e-10 70.5 198 26.3
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-10 70.5 165 30.3
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 2.6e-10 70.1 168 30.4
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 4.5e-10 69.3 216 30.6
ECA247G2658 Erigeron canadensis HOM05D001309 ORTHO05D000385 5.9e-10 68.9 74 50.0
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.9e-10 68.9 167 29.9
COL.COLO4_07537 Corchorus olitorius HOM05D011604 ORTHO05D012513 7.7e-10 68.6 84 44.0
Rhsim01G0064900 Rhododendron simsii HOM05D019892 ORTHO05D023103 7.7e-10 68.6 194 30.9
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.7e-10 68.6 205 29.3
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 1.7e-09 67.4 208 28.4
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-09 67.4 166 32.5
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-09 67.4 177 33.3
Zm00001eb190070 Zea mays HOM05D008576 ORTHO05D000385 1.7e-09 67.4 184 30.4
Zm00001eb027370 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
Zm00001eb029070 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
Zm00001eb184880 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
Zm00001eb333630 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
Zm00001eb384730 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
Zm00001eb438630 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 2.2e-09 67.0 184 30.4
COL.COLO4_29995 Corchorus olitorius HOM05D011604 ORTHO05D012513 3.8e-09 66.2 210 26.2
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 3.8e-09 66.2 184 30.4
ECA233G4902 Erigeron canadensis HOM05D011604 ORTHO05D012513 5.0e-09 65.9 116 35.3
ECA247G3253 Erigeron canadensis HOM05D005763 ORTHO05D005970 8.5e-09 65.1 216 26.9
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-08 63.9 162 30.2
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-08 63.5 176 29.5
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.5e-08 63.5 136 34.6
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-08 63.5 185 31.4
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.2e-08 63.2 179 26.3
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 4.2e-08 62.8 169 30.8
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 5.5e-08 62.4 185 29.7
Zm00001eb269580 Zea mays HOM05D008576 ORTHO05D000385 5.5e-08 62.4 185 29.2
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 5.5e-08 62.4 185 29.7
COL.COLO4_07811 Corchorus olitorius HOM05D011604 ORTHO05D012513 7.2e-08 62.0 103 36.9
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.2e-07 61.2 132 27.3
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-07 60.8 161 28.6
RcHm_v2.0_Chr3g0468771 Rosa chinensis HOM05D009706 ORTHO05D009452 2.1e-07 60.5 172 29.7
RcHm_v2.0_Chr4g0435991 Rosa chinensis HOM05D009706 ORTHO05D009452 2.1e-07 60.5 172 29.7
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 2.7e-07 60.1 135 34.1
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.7e-07 60.1 162 29.6
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 3.6e-07 59.7 200 28.5
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 4.7e-07 59.3 180 27.8
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 4.7e-07 59.3 135 34.8
EL10Ac2g03454 Beta vulgaris HOM05D008455 ORTHO05D009597 6.1e-07 58.9 180 28.9
COL.COLO4_29078 Corchorus olitorius HOM05D001309 ORTHO05D000385 6.1e-07 58.9 183 25.1
COL.COLO4_29219 Corchorus olitorius HOM05D001309 ORTHO05D000385 6.1e-07 58.9 170 30.6
EL10Ac6g13954 Beta vulgaris HOM05D008455 ORTHO05D009597 8.0e-07 58.5 217 27.6
C01p42640 Brassica napus HOM05D008309 ORTHO05D010308 8.0e-07 58.5 132 34.8
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 1.8e-06 57.4 200 28.0
Lalb_Chr21g0312571 Lupinus albus HOM05D009128 ORTHO05D011389 2.3e-06 57.0 168 28.6
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-06 56.6 173 29.5
Os02g0129000 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 3.0e-06 56.6 183 26.2
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.0e-06 56.6 169 28.4
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.0e-06 56.6 219 27.9
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 3.9e-06 56.2 135 32.6
EL10Ac3g06257 Beta vulgaris HOM05D008455 ORTHO05D009597 3.9e-06 56.2 160 31.9
COL.COLO4_22621 Corchorus olitorius HOM05D008576 ORTHO05D000385 5.2e-06 55.8 90 34.4
Os07g0212400 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 5.2e-06 55.8 183 26.2
Os08g0367300 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 5.2e-06 55.8 183 26.2
COL.COLO4_16333 Corchorus olitorius HOM05D011604 ORTHO05D012513 8.8e-06 55.1 210 23.8
COL.COLO4_37937 Corchorus olitorius HOM05D011604 ORTHO05D012513 8.8e-06 55.1 155 28.4


User provided reference genes

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