Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0436131 Helianthus annuus HOM05D004392 ORTHO05D004846 3.8e-67 258.1 132 100.0
HanXRQChr11g0352941 Helianthus annuus HOM05D004392 ORTHO05D004846 3.9e-48 194.9 120 80.0
HanXRQChr11g0352951 Helianthus annuus HOM05D004392 ORTHO05D004846 3.9e-48 194.9 120 80.0
Lsat_1_v5_gn_3_140700 Lactuca sativa HOM05D004392 ORTHO05D004846 3.2e-42 175.3 118 73.7
ECA233G3878 Erigeron canadensis HOM05D004392 ORTHO05D004846 4.5e-36 154.8 118 68.6
Lj9C607G8 Lonicera japonica HOM05D004392 ORTHO05D004846 7.6e-36 154.1 122 66.4
Rhsim07G0000300 Rhododendron simsii HOM05D004392 ORTHO05D004846 2.5e-34 149.1 115 65.2
vmacro00026 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 1.2e-33 146.7 115 64.3
Actinidia08006 Actinidia chinensis HOM05D004392 ORTHO05D004846 2.7e-33 145.6 115 65.2
CSS0009785 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 3.6e-33 145.2 115 65.2
CSS0004566 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 7.9e-33 144.1 115 64.3
Dinv34257 Davidia involucrata HOM05D004392 ORTHO05D004846 7.9e-33 144.1 121 61.2
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 1.0e-32 143.7 121 61.2
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 2.3e-32 142.5 116 61.2
THA.LOC104801349 Tarenaya hassleriana HOM05D004392 ORTHO05D004846 2.3e-32 142.5 124 59.7
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 3.0e-32 142.1 125 61.6
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 3.9e-32 141.7 117 59.8
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 8.7e-32 140.6 117 60.7
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 8.7e-32 140.6 123 62.6
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 1.1e-31 140.2 116 60.3
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 1.5e-31 139.8 118 61.9
PSO063G6286 Papaver somniferum HOM05D004392 ORTHO05D004846 1.9e-31 139.4 119 59.7
PSO782G2296 Papaver somniferum HOM05D004392 ORTHO05D004846 1.9e-31 139.4 119 59.7
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 2.5e-31 139.0 121 57.9
Migut.B01921 Erythranthe guttata HOM05D004392 ORTHO05D004846 4.3e-31 138.3 119 58.8
SalBow3G1181 Salvia bowleyana HOM05D004392 ORTHO05D004846 4.3e-31 138.3 127 57.5
SalBow3G3735 Salvia bowleyana HOM05D004392 ORTHO05D004846 4.3e-31 138.3 127 57.5
MSTRG.17382 Avicennia marina HOM05D004392 ORTHO05D004846 5.7e-31 137.9 124 55.6
Nn3g18803 Nelumbo nucifera HOM05D004392 ORTHO05D004846 5.7e-31 137.9 121 59.5
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 7.4e-31 137.5 112 64.3
Hma1.2p1_0074F.1_g038700 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 7.4e-31 137.5 121 59.5
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 7.4e-31 137.5 121 59.5
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 7.4e-31 137.5 121 57.9
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 9.7e-31 137.1 116 59.5
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 1.3e-30 136.7 117 59.0
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 2.2e-30 136.0 118 62.7
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 2.8e-30 135.6 121 58.7
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 4.8e-30 134.8 117 59.0
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 4.8e-30 134.8 121 57.0
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 4.8e-30 134.8 117 58.1
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea HOM05D004392 ORTHO05D004846 6.3e-30 134.4 117 59.0
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 1.1e-29 133.7 121 57.0
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 2.4e-29 132.5 121 56.2
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 3.1e-29 132.1 117 58.1
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 5.3e-29 131.3 121 57.0
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 6.9e-29 131.0 121 56.2
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 9.1e-29 130.6 117 57.3
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 9.1e-29 130.6 121 55.4
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 9.1e-29 130.6 117 58.1
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 1.5e-28 129.8 121 57.0
CAN.G929.34 Capsicum annuum HOM05D004392 ORTHO05D004846 2.0e-28 129.4 119 60.5
Cpa.g.sc193.6 Carica papaya HOM05D004392 ORTHO05D004846 2.0e-28 129.4 121 56.2
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 2.0e-28 129.4 118 56.8
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 2.6e-28 129.0 121 56.2
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 2.6e-28 129.0 117 55.6
SGA_v2.0_scaffold98G29423 Striga asiatica HOM05D004392 ORTHO05D004846 2.6e-28 129.0 119 53.8
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 4.5e-28 128.3 112 58.0
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 4.5e-28 128.3 111 58.6
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 5.9e-28 127.9 121 58.7
CDE02G2120 Ceratophyllum demersum HOM05D004392 ORTHO05D004846 7.7e-28 127.5 117 56.4
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 7.7e-28 127.5 112 58.0
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 1.0e-27 127.1 116 57.8
Peaxi162Scf00462g00512 Petunia axillaris HOM05D004392 ORTHO05D004846 1.0e-27 127.1 140 53.6
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 1.3e-27 126.7 122 56.6
Carub.0006s3583 Capsella rubella HOM05D004392 ORTHO05D004846 1.3e-27 126.7 122 55.7
ClCG05G000190 Citrullus lanatus HOM05D004392 ORTHO05D004846 1.3e-27 126.7 121 57.9
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 1.3e-27 126.7 112 58.0
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 2.2e-27 125.9 112 58.9
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 2.9e-27 125.6 121 57.0
DCAR_013954 Daucus carota HOM05D004392 ORTHO05D004846 3.8e-27 125.2 117 57.3
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 3.8e-27 125.2 123 55.3
AT4G00800 Arabidopsis thaliana HOM05D004392 ORTHO05D004846 5.0e-27 124.8 122 54.1
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 5.0e-27 124.8 111 56.8
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 5.0e-27 124.8 119 56.3
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 6.5e-27 124.4 122 55.7
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 6.5e-27 124.4 119 56.3
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 6.5e-27 124.4 122 54.9
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 1.1e-26 123.6 119 55.5
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.1e-26 123.6 119 55.5
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.1e-26 123.6 119 55.5
QL10p065016 Quercus lobata HOM05D004392 ORTHO05D004846 1.1e-26 123.6 117 54.7
AL6G52660 Arabidopsis lyrata HOM05D004392 ORTHO05D004846 1.4e-26 123.2 122 54.1
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.4e-26 123.2 119 55.5
Sopen05g026910 Solanum pennellii HOM05D004392 ORTHO05D004846 1.9e-26 122.9 119 58.0
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.5e-26 122.5 119 55.5
Nitab4.5_0011074g0010 Nicotiana tabacum HOM05D004392 ORTHO05D004846 2.5e-26 122.5 119 58.0
Solyc05g044610.3 Solanum lycopersicum HOM05D004392 ORTHO05D004846 2.5e-26 122.5 119 58.0
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 4.2e-26 121.7 119 54.6
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 4.2e-26 121.7 120 55.8
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 4.2e-26 121.7 120 55.8
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 5.5e-26 121.3 122 52.5
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 5.5e-26 121.3 122 52.5
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 5.5e-26 121.3 122 52.5
Nitab4.5_0000006g0150 Nicotiana tabacum HOM05D004392 ORTHO05D004846 9.4e-26 120.6 116 59.5
Sed0010760 Sechium edule HOM05D004392 ORTHO05D004846 1.6e-25 119.8 121 55.4
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 2.1e-25 119.4 122 51.6
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 2.1e-25 119.4 122 51.6
CAN.G929.32 Capsicum annuum HOM05D004392 ORTHO05D004846 2.7e-25 119.0 119 55.5
HPP92_014634 Vanilla planifolia HOM05D004392 ORTHO05D004846 6.1e-25 117.9 118 54.2
SHI29621 Sapria himalayana HOM05D004392 ORTHO05D004846 1.5e-23 113.2 128 49.2
ATR0304G014 Amborella trichopoda HOM05D004392 ORTHO05D004846 7.4e-23 110.9 121 47.1
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 1.3e-22 110.2 137 46.0
HanXRQChr14g0445111 Helianthus annuus HOM05D004392 ORTHO05D004846 8.2e-22 107.5 55 92.7
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 1.4e-21 106.7 121 48.8
SEGI_06399 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 2.4e-21 105.9 148 43.9
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 4.5e-20 101.7 109 54.1
Zm00001eb230740 Zea mays HOM05D004392 ORTHO05D004846 5.9e-20 101.3 124 44.4
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 7.7e-20 100.9 94 52.1
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 3.2e-18 95.5 123 40.7
unitig_736.g22806 Utricularia gibba HOM05D004392 ORTHO05D004846 2.1e-17 92.8 115 44.3
BcaB01g02314 Brassica carinata HOM05D004392 ORTHO05D004846 8.0e-17 90.9 107 50.5
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 1.4e-16 90.1 95 47.4
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 4.4e-15 85.1 98 46.9
Mapoly0063s0095 Marchantia polymorpha HOM05D004392 ORTHO05D004846 1.4e-13 80.1 164 33.5
TAR629G2483 Trochodendron aralioides HOM05D004392 ORTHO05D004846 4.1e-13 78.6 57 64.9
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 2.0e-12 76.3 71 50.7
Pp3c17_2710 Physcomitrium patens HOM05D004392 ORTHO05D004846 8.5e-11 70.9 160 25.6
Pp3c7_20800 Physcomitrium patens HOM05D004392 ORTHO05D004846 9.4e-10 67.4 116 34.5
CBR_g34692 Chara braunii HOM05D004392 ORTHO05D004846 4.7e-09 65.1 155 25.8
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis HOM05D004392 ORTHO05D004846 1.0e-08 63.9 134 30.6
Ah.07g200480 Amaranthus hybridus HOM05D004392 ORTHO05D004846 8.8e-08 60.8 71 47.9


User provided reference genes

Program Settings