Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 3.1e-204 714.9 360 100.0
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.7e-184 648.7 352 90.3
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 5.8e-179 630.9 362 85.6
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 9.7e-158 560.5 350 80.3
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.0e-155 552.7 350 77.7
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.6e-155 552.4 351 78.1
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.0e-154 550.4 351 77.2
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.9e-154 548.9 348 77.0
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 8.5e-154 547.4 354 77.1
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.4e-153 546.6 351 76.1
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.9e-153 546.2 349 77.7
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 7.9e-152 540.8 352 77.6
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 2.3e-151 539.3 354 76.6
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 5.1e-151 538.1 354 75.1
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 4.3e-150 535.0 354 76.8
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 7.4e-150 534.3 354 74.9
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.3e-149 533.5 354 74.9
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.3e-149 533.5 354 76.6
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.3e-149 533.5 354 74.6
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.2e-149 532.7 355 74.6
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 6.3e-149 531.2 354 76.3
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 8.2e-149 530.8 346 75.4
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 5.3e-148 528.1 355 74.1
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 9.1e-148 527.3 354 75.1
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.0e-147 526.2 353 73.4
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.6e-147 525.8 350 75.1
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 4.5e-147 525.0 354 73.7
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 4.5e-147 525.0 354 73.7
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 4.5e-147 525.0 350 73.7
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 7.7e-147 524.2 354 73.4
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 2.2e-146 522.7 354 73.7
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 3.8e-146 521.9 347 72.9
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.5e-146 521.2 352 73.9
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 8.5e-146 520.8 345 75.1
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 8.5e-146 520.8 346 74.6
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.4e-145 520.0 347 72.9
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.9e-145 519.6 355 73.0
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.9e-145 519.6 352 73.3
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 2.5e-145 519.2 355 73.0
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.2e-145 518.8 351 72.6
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 4.2e-145 518.5 351 73.8
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 5.5e-145 518.1 354 72.6
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 7.2e-145 517.7 360 73.3
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.4e-145 517.3 356 71.3
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 2.7e-144 515.8 353 72.2
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 2.7e-144 515.8 382 69.6
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.8e-143 513.1 355 72.4
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 1.8e-143 513.1 356 71.3
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.3e-143 512.7 355 71.5
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 5.1e-143 511.5 323 78.0
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 6.7e-143 511.1 353 71.7
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 6.7e-143 511.1 351 72.4
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 8.8e-143 510.8 322 77.3
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.1e-142 510.4 357 71.1
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.5e-142 510.0 355 71.0
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 9.7e-142 507.3 332 77.1
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 7.0e-140 501.1 363 68.9
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.5e-139 500.0 351 70.7
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 4.5e-139 498.4 318 75.5
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 4.5e-139 498.4 368 69.0
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.0e-138 497.3 350 70.6
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.0e-138 497.3 348 71.8
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.2e-138 496.1 410 63.2
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.1e-137 493.8 331 73.7
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.5e-137 493.4 349 71.9
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.5e-137 493.4 330 73.3
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.9e-137 493.0 352 69.9
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.2e-137 492.3 353 69.4
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 7.2e-137 491.1 357 68.9
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.4e-137 490.7 333 72.7
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.7e-136 489.2 322 74.5
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 3.6e-136 488.8 353 68.3
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.8e-135 486.5 345 71.0
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.3e-135 486.1 353 68.6
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 3.9e-135 485.3 377 65.8
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.1e-134 483.8 329 70.8
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.1e-134 483.8 326 72.7
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 9.7e-134 480.7 323 72.1
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 9.7e-134 480.7 339 72.9
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 2.8e-133 479.2 310 77.4
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 3.1e-132 475.7 326 71.2
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 7.0e-132 474.6 349 68.8
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.5e-131 472.2 338 71.3
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 7.7e-131 471.1 373 64.9
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.7e-130 469.9 331 70.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.7e-130 469.9 319 72.7
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.9e-129 466.5 324 69.4
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 6.1e-128 461.5 326 67.2
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.4e-127 460.3 351 67.2
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 4.0e-127 458.8 328 68.3
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 5.2e-127 458.4 330 69.4
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 5.2e-127 458.4 338 67.8
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 5.2e-127 458.4 319 71.8
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.8e-127 457.6 322 69.9
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 2.0e-126 456.4 354 66.4
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.6e-126 456.1 325 69.2
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 5.7e-126 454.9 324 67.6
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 6.3e-125 451.4 319 68.7
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.1e-124 450.7 359 65.2
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.8e-124 449.9 320 68.8
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.8e-124 449.9 319 69.0
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 4.1e-124 448.7 331 68.3
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 5.4e-124 448.4 327 67.0
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 7.0e-124 448.0 319 68.3
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.2e-123 447.2 334 66.2
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 2.0e-123 446.4 334 66.2
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.7e-123 446.0 332 66.9
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 3.5e-123 445.7 319 68.0
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.5e-123 445.3 323 65.9
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 4.5e-123 445.3 319 68.0
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.0e-122 444.1 325 66.5
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 1.0e-122 444.1 320 67.8
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 3.8e-122 442.2 350 65.7
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 6.5e-122 441.4 320 67.8
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 8.5e-122 441.0 320 67.8
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.1e-121 440.7 305 70.8
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 2.5e-121 439.5 333 65.2
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 3.2e-121 439.1 355 61.4
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 3.2e-121 439.1 359 62.1
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 5.5e-121 438.3 303 72.6
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.8e-119 433.3 355 63.4
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.5e-118 430.3 268 77.2
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 2.0e-118 429.9 333 64.6
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.2e-117 426.4 324 65.4
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.1e-116 424.1 308 67.5
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-113 414.1 324 64.8
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 6.8e-111 404.8 265 76.2
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.0e-110 403.3 289 71.3
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 3.4e-110 402.5 278 74.8
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 9.8e-110 401.0 531 43.5
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-101 374.0 225 81.3
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.5e-97 360.5 348 53.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 2.8e-96 356.3 324 58.3
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 8.1e-96 354.8 334 53.9
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 4.0e-87 325.9 299 55.2
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.8e-86 322.0 206 78.6
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.7e-85 320.5 278 60.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.0e-82 311.2 242 64.0
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.3e-82 310.8 224 69.2
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 3.3e-81 306.2 209 72.7
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 6.8e-79 298.5 266 59.0
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.4e-76 290.8 206 71.4
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 8.1e-72 275.0 189 73.0
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 5.8e-70 268.9 163 81.0
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.5e-62 244.2 371 39.9
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.0e-58 231.5 217 54.8
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 8.7e-58 228.4 188 66.5
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.1e-57 228.0 164 70.1
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 4.3e-57 226.1 161 66.5
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.8e-55 220.7 160 67.5
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.1e-47 194.9 273 42.1
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.6e-46 190.3 231 48.5
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.7e-45 187.6 329 40.1
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.3e-42 177.2 147 63.9
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.0e-37 161.8 118 68.6
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.1e-27 127.5 251 32.7
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.0e-26 125.2 118 55.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.5e-25 121.3 303 31.7
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.7e-24 117.9 206 38.3
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 4.1e-23 113.2 71 78.9
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 1.2e-22 111.7 305 32.1
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.5e-20 104.0 73 65.8
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 5.5e-20 102.8 66 71.2
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.5e-17 94.7 57 77.2
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.3e-17 93.6 56 80.4
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 9.7e-17 92.0 86 60.5
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 3.5e-06 57.0 81 38.3
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 5.9e-06 56.2 35 65.7
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 7.7e-06 55.8 49 46.9


User provided reference genes

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