Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0429711 Helianthus annuus HOM05D003625 ORTHO05D004382 6.4e-35 150.2 76 100.0
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 2.4e-10 68.6 54 66.7
HanXRQChr12g0370771 Helianthus annuus HOM05D003625 ORTHO05D004382 2.1e-09 65.5 88 44.3
HanXRQChr12g0370811 Helianthus annuus HOM05D003625 ORTHO05D004382 2.1e-09 65.5 88 44.3
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 6.0e-09 63.9 73 45.2
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 1.3e-08 62.8 48 62.5
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 2.3e-08 62.0 53 58.5
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 2.3e-08 62.0 58 55.2
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 5.1e-08 60.8 55 50.9
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 1.1e-07 59.7 42 61.9
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 1.1e-07 59.7 54 57.4
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 1.9e-07 58.9 62 46.8
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 1.9e-07 58.9 33 78.8
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 1.9e-07 58.9 42 64.3
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.9e-07 58.9 47 61.7
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 2.5e-07 58.5 55 52.7
Lsat_1_v5_gn_8_55721 Lactuca sativa HOM05D003625 ORTHO05D004382 2.5e-07 58.5 42 61.9
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 2.5e-07 58.5 61 49.2
Psat5g051000 Pisum sativum HOM05D003625 ORTHO05D004382 2.5e-07 58.5 42 59.5
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 2.5e-07 58.5 42 59.5
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 3.3e-07 58.2 66 47.0
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 3.3e-07 58.2 42 61.9
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 3.3e-07 58.2 33 75.8
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 4.3e-07 57.8 42 59.5
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 4.3e-07 57.8 42 59.5
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 4.3e-07 57.8 42 64.3
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 4.3e-07 57.8 42 64.3
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 4.3e-07 57.8 46 58.7
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 5.6e-07 57.4 42 59.5
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 5.6e-07 57.4 46 58.7
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 5.6e-07 57.4 56 55.4
arahy.Tifrunner.gnm1.ann1.TJRY6P Arachis hypogaea HOM05D003625 ORTHO05D004382 7.3e-07 57.0 42 61.9
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 7.3e-07 57.0 42 61.9
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 7.3e-07 57.0 42 64.3
FvH4_2g24530 Fragaria vesca HOM05D003625 ORTHO05D004382 7.3e-07 57.0 42 64.3
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 7.3e-07 57.0 42 64.3
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 7.3e-07 57.0 42 64.3
Atru.chr5.1297 Acer truncatum HOM05D003625 ORTHO05D004382 9.6e-07 56.6 91 39.6
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 9.6e-07 56.6 59 47.5
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 9.6e-07 56.6 59 47.5
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 9.6e-07 56.6 33 75.8
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 1.2e-06 56.2 71 40.8
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 1.2e-06 56.2 42 59.5
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 1.2e-06 56.2 42 59.5
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 1.6e-06 55.8 58 48.3
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 1.6e-06 55.8 42 57.1
Potri.002G213400 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.6e-06 55.8 46 56.5
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 2.1e-06 55.5 62 46.8
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 2.1e-06 55.5 42 57.1
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 2.1e-06 55.5 42 59.5
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 2.1e-06 55.5 42 57.1
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 2.1e-06 55.5 42 57.1
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 2.1e-06 55.5 42 54.8
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 2.8e-06 55.1 52 50.0
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 2.8e-06 55.1 56 48.2
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 2.8e-06 55.1 62 46.8
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 2.8e-06 55.1 62 46.8
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 2.8e-06 55.1 42 59.5
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 2.8e-06 55.1 42 57.1
TPR.G34306 Trifolium pratense HOM05D003625 ORTHO05D004382 2.8e-06 55.1 42 57.1
CSS0039297 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 3.6e-06 54.7 40 65.0
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 3.6e-06 54.7 42 61.9
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 3.6e-06 54.7 42 57.1
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 3.6e-06 54.7 42 57.1
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 3.6e-06 54.7 42 54.8
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 4.7e-06 54.3 56 48.2
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 4.7e-06 54.3 33 72.7
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 4.7e-06 54.3 58 48.3
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 4.7e-06 54.3 43 58.1
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 6.2e-06 53.9 33 72.7
AUR62034492 Chenopodium quinoa HOM05D003625 ORTHO05D004382 6.2e-06 53.9 56 50.0
Thhalv10028409m.g Eutrema salsugineum HOM05D003625 ORTHO05D004382 8.1e-06 53.5 62 41.9
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 8.1e-06 53.5 42 54.8
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 8.1e-06 53.5 33 69.7
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 8.1e-06 53.5 42 59.5
HPP92_011331 Vanilla planifolia HOM05D003625 ORTHO05D004382 8.1e-06 53.5 46 52.2


User provided reference genes

Program Settings