Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 4.4e-65 251.1 126 100.0
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 1.8e-42 176.0 114 77.2
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 4.1e-39 164.9 109 78.0
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 5.6e-36 154.5 107 71.0
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 6.2e-35 151.0 98 72.4
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 6.2e-35 151.0 98 72.4
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.3e-34 149.1 97 75.3
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 4.0e-34 148.3 98 72.4
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 4.0e-34 148.3 103 69.9
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.2e-34 147.9 107 67.3
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 8.9e-34 147.1 98 71.4
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.6e-33 145.6 107 66.4
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 2.6e-33 145.6 109 64.2
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 4.4e-33 144.8 97 70.1
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 5.8e-33 144.4 105 62.9
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 5.8e-33 144.4 104 67.3
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 5.8e-33 144.4 107 66.4
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 7.6e-33 144.1 94 68.1
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.7e-32 142.9 105 64.8
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 1.7e-32 142.9 93 71.0
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.2e-32 142.5 94 69.1
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 2.9e-32 142.1 107 62.6
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.9e-32 142.1 107 65.4
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 3.7e-32 141.7 107 65.4
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 3.7e-32 141.7 94 72.3
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 1.1e-31 140.2 89 73.0
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 1.1e-31 140.2 98 66.3
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 1.4e-31 139.8 89 71.9
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 1.9e-31 139.4 98 66.3
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 2.4e-31 139.0 94 69.1
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.4e-31 139.0 107 64.5
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 3.2e-31 138.7 104 65.4
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 3.2e-31 138.7 98 67.3
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 3.2e-31 138.7 94 70.2
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 9.2e-31 137.1 84 76.2
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 9.2e-31 137.1 98 65.3
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.2e-30 136.7 103 64.1
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.6e-30 136.3 121 57.9
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 1.6e-30 136.3 94 67.0
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.1e-30 136.0 98 66.3
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 2.7e-30 135.6 98 66.3
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 2.7e-30 135.6 96 69.8
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 3.5e-30 135.2 96 61.5
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 4.6e-30 134.8 103 66.0
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 7.8e-30 134.0 101 64.4
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 1.3e-29 133.3 80 77.5
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 1.3e-29 133.3 80 77.5
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 3.9e-29 131.7 89 68.5
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 3.9e-29 131.7 98 64.3
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.9e-29 131.7 98 64.3
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 3.9e-29 131.7 106 60.4
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 5.1e-29 131.3 93 63.4
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 5.1e-29 131.3 107 59.8
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 6.6e-29 131.0 94 68.1
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 8.6e-29 130.6 101 63.4
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 8.6e-29 130.6 101 63.4
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 8.6e-29 130.6 80 72.5
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 8.6e-29 130.6 101 62.4
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.5e-28 129.8 93 66.7
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.5e-28 129.8 80 75.0
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 3.3e-28 128.6 107 57.9
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 4.3e-28 128.3 90 66.7
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 4.3e-28 128.3 90 66.7
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 4.3e-28 128.3 90 66.7
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 4.3e-28 128.3 90 66.7
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 4.3e-28 128.3 90 66.7
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 4.3e-28 128.3 99 63.6
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 5.6e-28 127.9 94 63.8
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 7.3e-28 127.5 98 62.2
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 7.3e-28 127.5 99 63.6
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 9.6e-28 127.1 94 62.8
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.2e-27 126.7 95 66.3
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.2e-27 126.7 104 61.5
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 2.8e-27 125.6 82 70.7
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 2.8e-27 125.6 111 55.0
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 3.6e-27 125.2 80 72.5
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 4.7e-27 124.8 104 58.7
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 4.7e-27 124.8 112 57.1
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 6.2e-27 124.4 107 55.1
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 8.1e-27 124.0 107 55.1
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.1e-26 123.6 97 61.9
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 2.0e-25 119.4 98 60.2
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 2.0e-25 119.4 97 61.9
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 2.0e-25 119.4 111 53.2
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 2.6e-25 119.0 82 65.9
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 2.6e-25 119.0 87 62.1
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 4.4e-25 118.2 86 60.5
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 2.9e-24 115.5 74 71.6
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 4.9e-24 114.8 82 62.2
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 1.1e-23 113.6 80 61.2
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 1.4e-23 113.2 76 68.4
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.6e-22 109.8 88 58.0
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.8e-19 99.0 89 52.8
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 8.1e-19 97.4 94 56.4
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 3.1e-18 95.5 78 56.4
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 6.9e-18 94.4 89 51.7
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.2e-17 93.6 89 52.8
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 5.1e-13 78.2 68 54.4
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 4.3e-12 75.1 99 44.4
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 1.8e-10 69.7 54 64.8
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 6.4e-08 61.2 42 61.9
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.1e-07 60.5 53 52.8


User provided reference genes

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