Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.7e-179 632.5 313 100.0
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 6.3e-121 438.0 318 69.2
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 7.0e-120 434.5 316 69.9
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 8.8e-107 391.0 317 63.1
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 2.0e-106 389.8 317 63.4
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.2e-105 386.3 311 63.0
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 8.2e-105 384.4 318 61.9
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.4e-104 383.6 314 61.5
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 2.4e-104 382.9 316 62.0
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.1e-104 382.5 326 60.7
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 4.1e-104 382.1 313 61.0
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 4.1e-104 382.1 315 61.6
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 7.0e-104 381.3 314 60.8
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 7.0e-104 381.3 315 62.2
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 9.1e-104 380.9 318 61.3
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 1.6e-103 380.2 318 61.3
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 2.0e-103 379.8 314 61.5
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 4.5e-103 378.6 310 62.3
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.0e-102 377.5 310 63.2
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 1.0e-102 377.5 308 61.7
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 2.9e-102 375.9 300 63.0
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.9e-102 375.9 310 61.9
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 5.0e-102 375.2 322 59.3
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 5.0e-102 375.2 317 60.6
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.1e-101 374.0 300 62.7
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 1.5e-101 373.6 308 61.4
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.5e-101 373.6 315 59.0
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.9e-101 373.2 315 61.3
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 1.9e-101 373.2 282 65.2
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 5.5e-101 371.7 312 60.9
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 7.2e-101 371.3 314 60.8
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 2.1e-100 369.8 310 63.2
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.7e-100 369.4 304 59.5
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 6.1e-100 368.2 312 60.9
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 8.8e-99 364.4 317 59.6
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.5e-98 363.6 317 59.3
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 1.5e-98 363.6 313 59.4
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 2.0e-98 363.2 317 59.3
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 2.0e-98 363.2 302 62.3
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 9.8e-98 360.9 313 57.8
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 1.7e-97 360.1 314 59.9
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 1.7e-97 360.1 315 59.0
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 2.8e-97 359.4 316 58.5
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 2.8e-97 359.4 282 63.5
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 4.8e-97 358.6 318 57.5
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 6.3e-97 358.2 313 58.8
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 8.3e-97 357.8 320 58.4
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.4e-96 357.1 313 57.2
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.4e-96 357.1 320 58.1
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 2.4e-96 356.3 319 57.4
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.4e-96 356.3 273 65.6
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 3.1e-96 355.9 315 59.7
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 3.1e-96 355.9 314 57.3
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 5.4e-96 355.1 315 56.8
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.7e-95 352.8 314 58.3
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 3.5e-95 352.4 315 57.5
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 4.5e-95 352.1 313 58.1
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 4.5e-95 352.1 318 56.3
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.0e-94 350.9 318 56.9
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 1.0e-94 350.9 314 57.0
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 1.7e-94 350.1 322 56.2
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.8e-94 349.0 335 54.0
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 6.6e-94 348.2 313 56.9
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 3.3e-93 345.9 339 52.8
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.8e-92 342.8 271 62.0
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 6.1e-92 341.7 314 58.0
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 3.0e-91 339.3 301 58.8
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 4.0e-91 339.0 318 56.3
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 6.8e-91 338.2 315 57.8
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 6.8e-91 338.2 321 56.7
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 5.7e-90 335.1 311 58.2
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.3e-89 334.0 313 55.6
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 1.7e-89 333.6 310 56.5
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.8e-89 332.8 311 57.2
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 6.3e-89 331.6 317 57.4
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.4e-88 330.5 313 57.5
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 2.4e-88 329.7 309 57.6
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 3.1e-88 329.3 311 57.6
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 3.1e-88 329.3 300 57.3
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 2.0e-87 326.6 284 58.8
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 4.5e-87 325.5 310 57.4
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 7.8e-87 324.7 310 57.7
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.3e-86 323.9 309 55.3
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 5.6e-85 318.5 318 54.4
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.3e-81 307.4 313 51.4
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 4.9e-81 305.4 326 48.5
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 3.5e-79 299.3 308 51.6
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 8.6e-78 294.7 317 50.5
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 3.6e-76 289.3 320 49.7
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.8e-75 287.0 315 47.3
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 2.7e-71 273.1 291 50.9
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.2e-66 257.7 248 51.2
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 1.5e-66 257.3 249 51.4
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.0e-66 256.9 215 63.3
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 4.4e-66 255.8 231 56.3
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 1.2e-63 247.7 214 60.7
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 3.3e-61 239.6 193 61.1
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 5.6e-61 238.8 239 49.4
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 9.5e-61 238.0 226 56.2
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 6.2e-60 235.3 283 46.6
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.2e-55 221.1 210 56.7
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 6.0e-55 218.8 173 62.4
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 1.0e-54 218.0 186 54.8
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.0e-54 218.0 186 55.9
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 1.1e-51 208.0 184 53.3
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 9.9e-50 201.4 295 41.4
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 7.8e-47 191.8 233 45.5
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 6.6e-46 188.7 244 43.0
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.5e-45 186.8 167 57.5
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.2e-42 177.9 308 38.0
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 3.8e-33 146.4 144 59.0
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 2.7e-31 140.2 134 60.4
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 5.3e-27 125.9 130 56.9
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 6.9e-27 125.6 105 57.1
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.0e-25 121.7 99 57.6
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.8e-19 100.9 100 58.0
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 1.5e-18 97.8 281 27.4
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.1e-16 91.7 56 71.4
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 1.1e-16 91.7 238 28.2
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 1.8e-14 84.3 267 25.8
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 1.3e-12 78.2 68 52.9
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 6.1e-07 59.3 190 25.8


User provided reference genes

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