Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 6.9e-59 230.3 108 100.0
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 2.7e-39 165.2 79 97.5
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 2.2e-36 155.6 80 92.5
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 2.2e-36 155.6 80 92.5
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 1.1e-35 153.3 80 91.2
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 1.4e-35 152.9 80 90.0
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-35 152.1 80 90.0
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 2.4e-35 152.1 80 88.8
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 2.4e-35 152.1 80 90.0
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 2.4e-35 152.1 80 88.8
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 3.1e-35 151.8 80 90.0
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 4.1e-35 151.4 80 88.8
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 6.9e-35 150.6 95 77.9
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 9.0e-35 150.2 80 90.0
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 9.0e-35 150.2 80 90.0
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 9.0e-35 150.2 80 87.5
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 9.0e-35 150.2 80 90.0
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 9.0e-35 150.2 80 90.0
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 9.0e-35 150.2 80 90.0
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 87.5
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.2e-34 149.8 80 88.8
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.5e-34 149.4 80 87.5
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.5e-34 149.4 80 87.5
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 1.5e-34 149.4 80 87.5
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 1.5e-34 149.4 80 87.5
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 1.5e-34 149.4 80 87.5
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.5e-34 149.4 80 90.0
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 2.0e-34 149.1 80 86.2
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.0e-34 149.1 80 87.5
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 2.0e-34 149.1 80 88.8
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 2.0e-34 149.1 80 88.8
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 2.0e-34 149.1 80 88.8
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 2.0e-34 149.1 80 88.8
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.6e-34 148.7 80 87.5
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 2.6e-34 148.7 80 88.8
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.4e-34 148.3 80 85.0
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 4.5e-34 147.9 80 87.5
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 4.5e-34 147.9 80 87.5
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 4.5e-34 147.9 80 87.5
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 4.5e-34 147.9 80 87.5
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 87.5
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 86.2
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 87.5
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 86.2
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 86.2
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 86.2
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 86.2
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 87.5
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 5.9e-34 147.5 80 87.5
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.3e-33 146.4 80 83.8
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 1.7e-33 146.0 79 87.3
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 2.2e-33 145.6 80 86.2
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.2e-33 145.6 80 86.2
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 3.8e-33 144.8 76 90.8
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 8.5e-33 143.7 80 86.2
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 8.5e-33 143.7 80 86.2
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 8.5e-33 143.7 80 86.2
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 1.1e-32 143.3 80 86.2
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.4e-32 142.9 79 87.3
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 1.4e-32 142.9 80 85.0
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 1.9e-32 142.5 80 85.0
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.9e-32 142.5 80 85.0
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 1.9e-32 142.5 80 85.0
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 1.9e-32 142.5 80 85.0
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 1.9e-32 142.5 80 85.0
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 1.9e-32 142.5 80 81.2
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 2.5e-32 142.1 77 85.7
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 2.5e-32 142.1 80 85.0
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 2.5e-32 142.1 80 86.2
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 2.5e-32 142.1 74 89.2
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 3.2e-32 141.7 80 83.8
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 3.2e-32 141.7 80 83.8
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 5.5e-32 141.0 78 85.9
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 7.2e-32 140.6 80 83.8
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 9.3e-32 140.2 80 82.5
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 2.7e-31 138.7 80 82.5
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 3.6e-31 138.3 80 81.2
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 3.6e-31 138.3 77 85.7
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 3.6e-31 138.3 80 81.2
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 3.6e-31 138.3 78 82.1
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 4.6e-31 137.9 80 80.0
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 7.9e-31 137.1 83 77.1
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 3.9e-30 134.8 80 80.0
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 3.9e-30 134.8 78 83.3
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 6.7e-30 134.0 80 78.8
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 7.4e-29 130.6 80 75.0
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.1e-27 126.7 79 74.7
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.1e-27 126.7 79 74.7
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 3.8e-25 118.2 77 76.6
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 6.5e-25 117.5 67 85.1
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 7.2e-24 114.0 55 94.5
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.6e-23 112.8 105 58.1
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 3.1e-19 98.6 45 95.6
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 6.9e-19 97.4 79 54.4
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 1.5e-18 96.3 61 78.7
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 2.0e-18 95.9 46 91.3
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 2.0e-18 95.9 45 95.6
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 3.4e-18 95.1 55 81.8
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.3e-17 93.2 45 91.1
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 2.9e-17 92.0 80 55.0
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 1.2e-15 86.7 79 50.6
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 8.0e-15 84.0 45 80.0
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 7.4e-13 77.4 65 60.0
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 1.7e-12 76.3 43 83.7


User provided reference genes

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