Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0410791 Helianthus annuus HOM05D004252 ORTHO05D005101 1.2e-155 553.1 284 100.0
HanXRQChr01g0016721 Helianthus annuus HOM05D004252 ORTHO05D005101 4.3e-153 544.7 283 99.3
HanXRQChr10g0278361 Helianthus annuus HOM05D004252 ORTHO05D005101 6.9e-135 484.2 287 87.8
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 3.8e-133 478.4 279 91.0
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 8.3e-112 407.5 283 80.2
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 9.4e-108 394.0 283 74.6
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 3.5e-86 322.4 304 62.8
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 6.0e-86 321.6 289 63.3
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 6.0e-86 321.6 290 66.2
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 7.8e-86 321.2 301 60.5
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 8.6e-85 317.8 301 60.8
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 1.9e-84 316.6 301 60.5
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 4.3e-84 315.5 299 61.9
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 7.3e-84 314.7 301 60.1
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 9.5e-84 314.3 301 60.1
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 2.1e-83 313.2 304 60.9
Sopen01g040990 Solanum pennellii HOM05D004252 ORTHO05D005101 6.2e-83 311.6 304 60.9
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 1.8e-82 310.1 301 60.8
Nitab4.5_0001592g0060 Nicotiana tabacum HOM05D004252 ORTHO05D005101 2.3e-82 309.7 300 60.3
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 3.1e-82 309.3 304 60.9
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 5.2e-82 308.5 301 58.5
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 8.9e-82 307.8 293 60.4
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 2.0e-81 306.6 305 59.3
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 2.6e-81 306.2 305 61.0
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 3.4e-81 305.8 292 60.6
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 3.4e-81 305.8 292 60.6
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 5.8e-81 305.1 304 59.5
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 5.8e-81 305.1 300 60.3
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 5.8e-81 305.1 295 60.7
Oeu002657.3 Olea europaea HOM05D004252 ORTHO05D005101 7.5e-81 304.7 305 60.3
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 7.5e-81 304.7 295 60.7
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 7.5e-81 304.7 299 58.9
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 1.7e-80 303.5 304 59.2
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 2.2e-80 303.1 305 58.7
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 2.9e-80 302.8 286 59.8
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 3.7e-80 302.4 294 60.5
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 4.9e-80 302.0 313 57.5
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 6.4e-80 301.6 304 58.2
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 6.4e-80 301.6 305 57.7
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 8.3e-80 301.2 311 58.5
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 8.3e-80 301.2 304 58.9
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 8.3e-80 301.2 305 58.7
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 8.3e-80 301.2 302 58.3
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 1.9e-79 300.1 296 61.1
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 1.9e-79 300.1 303 58.7
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 2.4e-79 299.7 296 60.5
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 2.4e-79 299.7 300 59.0
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 4.1e-79 298.9 303 58.4
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 4.1e-79 298.9 295 60.7
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 5.4e-79 298.5 304 59.2
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 5.4e-79 298.5 300 59.7
Ah.06g192370 Amaranthus hybridus HOM05D004252 ORTHO05D005101 7.1e-79 298.1 305 59.3
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 9.2e-79 297.7 303 58.4
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 9.2e-79 297.7 304 58.9
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 1.2e-78 297.4 303 60.4
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 1.6e-78 297.0 299 58.9
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 1.6e-78 297.0 308 57.5
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 2.1e-78 296.6 300 60.0
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 2.1e-78 296.6 292 58.6
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 2.1e-78 296.6 302 57.9
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 2.7e-78 296.2 294 60.2
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 2.7e-78 296.2 300 59.0
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 4.6e-78 295.4 305 58.4
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 6.0e-78 295.0 301 59.8
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 6.0e-78 295.0 305 57.4
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 7.8e-78 294.7 294 59.9
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 1.0e-77 294.3 293 58.4
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 1.3e-77 293.9 304 57.9
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 2.3e-77 293.1 305 58.0
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 3.9e-77 292.4 304 57.9
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 8.6e-77 291.2 299 58.2
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 1.9e-76 290.0 302 57.0
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 2.5e-76 289.7 307 58.0
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 5.6e-76 288.5 298 57.7
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 7.3e-76 288.1 306 57.5
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 7.3e-76 288.1 301 55.5
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 3.6e-75 285.8 303 57.8
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 3.6e-75 285.8 296 57.1
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 4.7e-75 285.4 308 55.5
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 1.8e-74 283.5 300 58.0
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.3e-74 283.1 297 57.2
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 4.0e-74 282.3 299 57.5
Aqoxy1G03371 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 6.8e-74 281.6 297 56.9
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 6.8e-74 281.6 284 60.6
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 5.8e-73 278.5 300 54.7
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 5.8e-73 278.5 291 57.4
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 6.4e-72 275.0 296 57.1
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 6.4e-72 275.0 299 56.9
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.4e-71 273.1 301 56.1
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 7.1e-71 271.6 300 56.0
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 2.7e-70 269.6 296 55.7
CARHR078990 Cardamine hirsuta HOM05D004252 ORTHO05D005101 1.0e-69 267.7 297 55.9
SGA_v2.0_scaffold172G38984 Striga asiatica HOM05D004252 ORTHO05D005101 1.7e-69 266.9 300 56.7
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 1.5e-68 263.8 295 53.6
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 3.3e-68 262.7 292 53.4
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 7.3e-68 261.5 299 55.9
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 2.1e-67 260.0 299 54.8
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 5.2e-66 255.4 297 54.9
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 8.9e-66 254.6 283 56.5
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 8.9e-66 254.6 283 56.5
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 2.6e-65 253.1 292 51.0
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 2.2e-64 250.0 283 55.1
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 2.2e-64 250.0 283 55.1
SEGI_19302 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 2.2e-64 250.0 311 53.4
Oeu027473.1 Olea europaea HOM05D004252 ORTHO05D005101 1.1e-63 247.7 204 65.2
Atru.chr2.823 Acer truncatum HOM05D004252 ORTHO05D005101 5.4e-63 245.4 209 64.1
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 1.0e-61 241.1 327 49.2
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 2.5e-60 236.5 200 64.0
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 5.6e-60 235.3 307 49.8
Cpa.g.sc2756.2 Carica papaya HOM05D004252 ORTHO05D005101 2.1e-59 233.4 209 63.2
CDE02G1705 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 6.2e-59 231.9 302 50.3
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 5.8e-57 225.3 304 51.6
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 7.9e-46 188.3 196 58.2
SHI18418 Sapria himalayana HOM05D004252 ORTHO05D005101 3.0e-45 186.4 281 43.4
CAN.G134.96 Capsicum annuum HOM05D004252 ORTHO05D005101 8.1e-43 178.3 155 63.2
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 2.4e-42 176.8 281 42.7
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.5e-41 174.1 313 38.7
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 7.6e-41 171.8 331 40.8
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 4.9e-40 169.1 313 39.6
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.7e-38 163.3 166 57.2
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 5.1e-37 159.1 285 37.5
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 1.0e-16 91.7 125 51.2
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 1.4e-15 87.8 125 49.6
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 3.9e-13 79.7 79 58.2
arahy.Tifrunner.gnm1.ann1.E2R4RP Arachis hypogaea HOM05D004252 ORTHO05D005101 4.4e-12 76.3 51 82.4
Atru.chr2.822 Acer truncatum HOM05D004252 ORTHO05D005101 1.6e-09 67.8 66 57.6
Dinv08152 Davidia involucrata HOM05D004252 ORTHO05D005101 1.6e-09 67.8 66 59.1
Cpa.g.sc2756.1 Carica papaya HOM05D004252 ORTHO05D005101 2.0e-09 67.4 63 60.3


User provided reference genes

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