Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0408521 Helianthus annuus HOM05D001522 ORTHO05D223451 2.0e-42 175.3 82 100.0
Lsat_1_v5_gn_8_36821 Lactuca sativa HOM05D001522 ORTHO05D001547 4.6e-15 84.3 75 58.7
HanXRQChr08g0215041 Helianthus annuus HOM05D001522 ORTHO05D001547 1.3e-14 82.8 75 57.3
Lsat_1_v5_gn_2_33981 Lactuca sativa HOM05D001522 ORTHO05D008782 3.0e-14 81.6 74 58.1
HanXRQChr12g0365111 Helianthus annuus HOM05D001522 ORTHO05D001547 5.1e-14 80.9 75 54.7
ECA233G0091 Erigeron canadensis HOM05D001522 ORTHO05D001547 1.5e-13 79.3 75 53.3
PSO063G6316 Papaver somniferum HOM05D001522 ORTHO05D001547 2.0e-10 68.9 75 45.3
MSTRG.7722 Avicennia marina HOM05D001522 ORTHO05D001547 4.5e-10 67.8 75 46.7
Migut.L01153 Erythranthe guttata HOM05D001522 ORTHO05D001547 5.8e-10 67.4 75 45.3
SalBow2G2326 Salvia bowleyana HOM05D001522 ORTHO05D001547 7.6e-10 67.0 75 45.3
Cc11_g11410 Coffea canephora HOM05D001522 ORTHO05D001547 1.0e-09 66.6 75 46.7
TAR622G1136 Trochodendron aralioides HOM05D001522 ORTHO05D001547 5.0e-09 64.3 75 42.7
CSS0008825 Camellia sinensis var. sinensis HOM05D001522 ORTHO05D001547 8.4e-09 63.5 75 42.7
CSS0043522 Camellia sinensis var. sinensis HOM05D001522 ORTHO05D001547 8.4e-09 63.5 75 42.7
TAR629G1413 Trochodendron aralioides HOM05D001522 ORTHO05D001547 8.4e-09 63.5 75 41.3
Actinidia07758 Actinidia chinensis HOM05D001522 ORTHO05D001547 1.1e-08 63.2 76 44.7
Oeu024146.1 Olea europaea HOM05D001522 ORTHO05D001547 1.1e-08 63.2 75 42.7
Peaxi162Scf00188g00930 Petunia axillaris HOM05D001522 ORTHO05D001547 1.1e-08 63.2 75 45.3
Rhsim09G0120300 Rhododendron simsii HOM05D001522 ORTHO05D001547 1.1e-08 63.2 75 44.0
Sopen05g006460 Solanum pennellii HOM05D001522 ORTHO05D001547 1.1e-08 63.2 75 45.3
vmacro10468 Vaccinium macrocarpon HOM05D001522 ORTHO05D001547 1.4e-08 62.8 75 42.7
Nn3g17574 Nelumbo nucifera HOM05D001522 ORTHO05D001547 1.9e-08 62.4 75 42.7
CiPaw.03G081500 Carya illinoinensis HOM05D001522 ORTHO05D001547 2.5e-08 62.0 75 42.7
Nn4g23568 Nelumbo nucifera HOM05D001522 ORTHO05D001547 2.5e-08 62.0 75 42.7
GSVIVG01010122001 Vitis vinifera HOM05D001522 ORTHO05D001547 2.5e-08 62.0 75 42.7
CSS0004738 Camellia sinensis var. sinensis HOM05D001522 ORTHO05D001547 3.2e-08 61.6 75 42.7
CSS0036559 Camellia sinensis var. sinensis HOM05D001522 ORTHO05D001547 3.2e-08 61.6 75 42.7
Hma1.2p1_0448F.1_g154880 Hydrangea macrophylla HOM05D001522 ORTHO05D001547 3.2e-08 61.6 75 45.3
Nitab4.5_0002309g0120 Nicotiana tabacum HOM05D001522 ORTHO05D001547 3.2e-08 61.6 75 44.0
TAR374G0294 Trochodendron aralioides HOM05D001522 ORTHO05D001547 4.2e-08 61.2 75 41.3
Lj3A1026T87 Lonicera japonica HOM05D001522 ORTHO05D001547 5.5e-08 60.8 75 42.7
Lalb_Chr04g0258321 Lupinus albus HOM05D001522 ORTHO05D001547 5.5e-08 60.8 75 44.0
unitig_22.g6890 Utricularia gibba HOM05D001522 ORTHO05D001547 7.1e-08 60.5 75 41.3
CAN.G869.29 Capsicum annuum HOM05D001522 ORTHO05D001547 9.3e-08 60.1 75 42.7
CiPaw.04G051200 Carya illinoinensis HOM05D001522 ORTHO05D001547 9.3e-08 60.1 75 42.7
vmacro05606 Vaccinium macrocarpon HOM05D001522 ORTHO05D001547 1.2e-07 59.7 75 41.3
MD17G1067300 Malus domestica HOM05D001522 ORTHO05D001547 1.6e-07 59.3 75 42.7
Nitab4.5_0000259g0060 Nicotiana tabacum HOM05D001522 ORTHO05D001547 1.6e-07 59.3 75 42.7
SGA_v2.0_scaffold16G07836 Striga asiatica HOM05D001522 ORTHO05D001547 1.6e-07 59.3 75 41.3
Cfa007710 Carpinus fangiana HOM05D001522 ORTHO05D001547 2.7e-07 58.5 75 41.3
PGR102G2723 Punica granatum HOM05D001522 ORTHO05D001547 2.7e-07 58.5 76 36.8
Lj4A126G59 Lonicera japonica HOM05D001522 ORTHO05D001547 3.5e-07 58.2 75 41.3
Ciclev10010966m.g Citrus clementina HOM05D001522 ORTHO05D001547 4.6e-07 57.8 75 41.3
GSVIVG01036518001 Vitis vinifera HOM05D001522 ORTHO05D001547 4.6e-07 57.8 75 41.3
Haze_14362 Corylus avellana HOM05D001522 ORTHO05D001547 6.1e-07 57.4 75 41.3
Aqoxy7G03454 Aquilegia oxysepala HOM05D001522 ORTHO05D001547 7.9e-07 57.0 75 42.7
Nitab4.5_0002978g0170 Nicotiana tabacum HOM05D001522 ORTHO05D001547 7.9e-07 57.0 75 41.3
Sc04g0007290 Simmondsia chinensis HOM05D001522 ORTHO05D001547 7.9e-07 57.0 75 41.3
Rhsim10G0060400 Rhododendron simsii HOM05D001522 ORTHO05D001547 1.3e-06 56.2 75 41.3
Atru.chr8.601 Acer truncatum HOM05D001522 ORTHO05D001547 1.8e-06 55.8 75 41.3
Lj4g0026549 Lotus japonicus HOM05D001522 ORTHO05D001547 1.8e-06 55.8 76 40.8
SEGI_32027 Sequoiadendron giganteum HOM05D001522 ORTHO05D001547 1.8e-06 55.8 83 37.3
ClCG11G005030 Citrullus lanatus HOM05D001522 ORTHO05D001547 2.3e-06 55.5 75 41.3
ClCG05G023460 Citrullus lanatus HOM05D001522 ORTHO05D001547 3.0e-06 55.1 77 40.3
Dinv34000 Davidia involucrata HOM05D001522 ORTHO05D001547 3.9e-06 54.7 75 38.7
Nitab4.5_0002171g0130 Nicotiana tabacum HOM05D001522 ORTHO05D001547 3.9e-06 54.7 75 40.0
CANSAT64G0199 Cannabis sativa HOM05D001522 ORTHO05D001547 5.1e-06 54.3 76 38.2
Sc10g0000510 Simmondsia chinensis HOM05D001522 ORTHO05D001547 5.1e-06 54.3 75 40.0
EL10Ac2g04415 Beta vulgaris HOM05D001522 ORTHO05D001547 6.7e-06 53.9 75 40.0
Cpa.g.sc14.252 Carica papaya HOM05D001522 ORTHO05D001547 6.7e-06 53.9 75 40.0
Nn8g40030 Nelumbo nucifera HOM05D001522 ORTHO05D001547 6.7e-06 53.9 75 38.7
TAR625G1181 Trochodendron aralioides HOM05D001522 ORTHO05D001547 6.7e-06 53.9 75 38.7
ECA232G4010 Erigeron canadensis HOM05D001522 ORTHO05D001547 8.7e-06 53.5 75 38.7
HanXRQChr15g0464881 Helianthus annuus HOM05D001522 ORTHO05D001547 8.7e-06 53.5 75 40.0


User provided reference genes

Program Settings