Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0396361 Helianthus annuus HOM05D004834 ORTHO05D006247 1.5e-40 169.1 87 100.0
HanXRQChr17g0565621 Helianthus annuus HOM05D004834 ORTHO05D006247 2.3e-28 128.6 76 90.8
HanXRQChr14g0453201 Helianthus annuus HOM05D004834 ORTHO05D006247 5.8e-24 114.0 61 96.7
Lsat_1_v5_gn_2_102000 Lactuca sativa HOM05D004834 ORTHO05D006247 2.9e-23 111.7 61 91.8
ECA238G0502 Erigeron canadensis HOM05D004834 ORTHO05D006247 1.9e-22 109.0 61 93.4
FAN05G4019 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.4e-22 107.5 63 87.3
PSO339G5030 Papaver somniferum HOM05D004834 ORTHO05D006247 5.4e-22 107.5 61 90.2
PSO384G0426 Papaver somniferum HOM05D004834 ORTHO05D006247 5.4e-22 107.5 61 90.2
THA.LOC104799266 Tarenaya hassleriana HOM05D004834 ORTHO05D006247 5.4e-22 107.5 61 90.2
Prupe.7G088900 Prunus persica HOM05D004834 ORTHO05D006247 7.1e-22 107.1 66 81.8
Cc06_g07030 Coffea canephora HOM05D004834 ORTHO05D006247 9.2e-22 106.7 61 90.2
MBI11_g39498_MAGBIO Magnolia biondii HOM05D004834 ORTHO05D006247 9.2e-22 106.7 61 90.2
TAR636G2709 Trochodendron aralioides HOM05D004834 ORTHO05D006247 9.2e-22 106.7 61 90.2
CSS0012663 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 1.2e-21 106.3 61 90.2
Oeu035654.3 Olea europaea HOM05D004834 ORTHO05D006247 1.2e-21 106.3 83 69.9
GSVIVG01022507001 Vitis vinifera HOM05D004834 ORTHO05D006247 1.2e-21 106.3 61 90.2
CSS0029343 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 1.6e-21 105.9 61 88.5
FAN14G4987 Fragaria x ananassa HOM05D004834 ORTHO05D006247 1.6e-21 105.9 63 85.7
Manes.09G041400 Manihot esculenta HOM05D004834 ORTHO05D006247 2.1e-21 105.5 61 88.5
vmacro07524 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 2.1e-21 105.5 61 86.9
MSTRG.19322 Avicennia marina HOM05D004834 ORTHO05D006247 2.7e-21 105.1 61 88.5
COL.COLO4_29472 Corchorus olitorius HOM05D004834 ORTHO05D006247 2.7e-21 105.1 61 86.9
FAN02G4310 Fragaria x ananassa HOM05D004834 ORTHO05D006247 2.7e-21 105.1 63 85.7
Rhsim03G0058000 Rhododendron simsii HOM05D004834 ORTHO05D006247 2.7e-21 105.1 61 86.9
SalBow1G1939 Salvia bowleyana HOM05D004834 ORTHO05D006247 2.7e-21 105.1 61 86.9
Thecc.05G183400 Theobroma cacao HOM05D004834 ORTHO05D006247 2.7e-21 105.1 61 86.9
Oeu063072.1 Olea europaea HOM05D004834 ORTHO05D006247 3.5e-21 104.8 61 86.9
Prupe.7G088800 Prunus persica HOM05D004834 ORTHO05D006247 3.5e-21 104.8 61 86.9
Actinidia03850 Actinidia chinensis HOM05D004834 ORTHO05D006247 4.6e-21 104.4 61 85.2
Potri.016G064800 Populus trichocarpa HOM05D004834 ORTHO05D006247 4.6e-21 104.4 61 85.2
Migut.J00722 Erythranthe guttata HOM05D004834 ORTHO05D006247 6.0e-21 104.0 61 88.5
Nitab4.5_0000117g0030 Nicotiana tabacum HOM05D004834 ORTHO05D006247 6.0e-21 104.0 70 77.1
FAN05G2138 Fragaria x ananassa HOM05D004834 ORTHO05D006247 7.8e-21 103.6 61 86.9
Glyma.03G205500 Glycine max HOM05D004834 ORTHO05D006247 7.8e-21 103.6 61 85.2
Hma1.2p1_0304F.1_g119280 Hydrangea macrophylla HOM05D004834 ORTHO05D006247 7.8e-21 103.6 61 88.5
Lj1g0003379 Lotus japonicus HOM05D004834 ORTHO05D006247 7.8e-21 103.6 61 85.2
Rhsim03G0058100 Rhododendron simsii HOM05D004834 ORTHO05D006247 7.8e-21 103.6 61 85.2
RcHm_v2.0_Chr3g0477531 Rosa chinensis HOM05D004834 ORTHO05D006247 7.8e-21 103.6 61 86.9
Atru.chr8.1261 Acer truncatum HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 86.9
Cfa020095 Carpinus fangiana HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 85.2
Ciclev10011373m.g Citrus clementina HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 85.2
Haze_20096 Corylus avellana HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 85.2
Nn2g14430 Nelumbo nucifera HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 86.9
QL07p026067 Quercus lobata HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 85.2
SGA_v2.0_scaffold112G31558 Striga asiatica HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 88.5
vmacro07522 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 1.0e-20 103.2 65 78.5
vmacro07525 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 1.0e-20 103.2 62 82.3
Zm00001eb117230 Zea mays HOM05D004834 ORTHO05D006247 1.0e-20 103.2 61 86.9
Aqoxy1G00576 Aquilegia oxysepala HOM05D004834 ORTHO05D006247 1.3e-20 102.8 61 83.6
CARHR206620 Cardamine hirsuta HOM05D004834 ORTHO05D006247 1.3e-20 102.8 63 81.0
Gohir.A09G131900 Gossypium hirsutum HOM05D004834 ORTHO05D006247 1.3e-20 102.8 61 85.2
unitig_26.g9147 Utricularia gibba HOM05D004834 ORTHO05D006247 1.3e-20 102.8 61 85.2
Gohir.D09G128200 Gossypium hirsutum HOM05D004834 ORTHO05D006247 1.7e-20 102.4 61 85.2
Lalb_Chr20g0111191 Lupinus albus HOM05D004834 ORTHO05D006247 1.7e-20 102.4 61 82.0
Ca_09087_v3 Cicer arietinum L. HOM05D004834 ORTHO05D006247 2.3e-20 102.1 61 83.6
FvH4_6g21120 Fragaria vesca HOM05D004834 ORTHO05D006247 2.3e-20 102.1 61 85.2
Sabra16G0066600 Salix brachista HOM05D004834 ORTHO05D006247 2.3e-20 102.1 80 66.2
TWI53G0913 Tripterygium wilfordii HOM05D004834 ORTHO05D006247 2.3e-20 102.1 61 86.9
arahy.Tifrunner.gnm1.ann1.5D1JVS Arachis hypogaea HOM05D004834 ORTHO05D006247 3.0e-20 101.7 61 83.6
CANSAT64G2176 Cannabis sativa HOM05D004834 ORTHO05D006247 3.0e-20 101.7 61 85.2
Duzib093G1706 Durio zibethinus HOM05D004834 ORTHO05D006247 3.0e-20 101.7 61 85.2
Phvul.001G199000 Phaseolus vulgaris HOM05D004834 ORTHO05D006247 3.0e-20 101.7 61 83.6
Psat3g026160 Pisum sativum HOM05D004834 ORTHO05D006247 3.0e-20 101.7 61 82.0
VMungo1383G2386 Vigna mungo HOM05D004834 ORTHO05D006247 3.0e-20 101.7 61 83.6
TAR633G1355 Trochodendron aralioides HOM05D004834 ORTHO05D006247 3.9e-20 101.3 60 86.7
CiPaw.09G024600 Carya illinoinensis HOM05D004834 ORTHO05D006247 5.1e-20 100.9 61 83.6
Sopen11g020840 Solanum pennellii HOM05D004834 ORTHO05D006247 5.1e-20 100.9 61 83.6
PGSC0003DMG403008663 Solanum tuberosum HOM05D004834 ORTHO05D006247 5.1e-20 100.9 61 83.6
CsaV3_3G038380 Cucumis sativus L. HOM05D004834 ORTHO05D006247 6.6e-20 100.5 61 85.2
MD12G1046600 Malus domestica HOM05D004834 ORTHO05D006247 6.6e-20 100.5 61 83.6
HPP92_012150 Vanilla planifolia HOM05D004834 ORTHO05D006247 6.6e-20 100.5 61 83.6
Ah.02g115150 Amaranthus hybridus HOM05D004834 ORTHO05D006247 8.6e-20 100.1 61 82.0
CAN.G409.3 Capsicum annuum HOM05D004834 ORTHO05D006247 8.6e-20 100.1 61 83.6
DCAR_013465 Daucus carota HOM05D004834 ORTHO05D006247 8.6e-20 100.1 61 83.6
Gorai.006G146800 Gossypium raimondii HOM05D004834 ORTHO05D006247 8.6e-20 100.1 61 85.2
Medtr7g107050 Medicago truncatula HOM05D004834 ORTHO05D006247 8.6e-20 100.1 61 83.6
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 1.1e-19 99.8 61 80.3
SEGI_09254 Sequoiadendron giganteum HOM05D004834 ORTHO05D006247 1.1e-19 99.8 62 83.9
CANSAT64G0017 Cannabis sativa HOM05D004834 ORTHO05D006247 1.5e-19 99.4 61 83.6
MELO3C009581.2 Cucumis melo HOM05D004834 ORTHO05D006247 1.5e-19 99.4 61 83.6
AL6G16670 Arabidopsis lyrata HOM05D004834 ORTHO05D006247 1.9e-19 99.0 61 80.3
AT5G06580 Arabidopsis thaliana HOM05D004834 ORTHO05D006247 1.9e-19 99.0 61 80.3
Eucgr.A02536 Eucalyptus grandis HOM05D004834 ORTHO05D006247 1.9e-19 99.0 61 82.0
Carub.0006s0546 Capsella rubella HOM05D004834 ORTHO05D006247 2.5e-19 98.6 61 80.3
Thhalv10013121m.g Eutrema salsugineum HOM05D004834 ORTHO05D006247 2.5e-19 98.6 61 78.7
EL10Ac5g11795 Beta vulgaris HOM05D004834 ORTHO05D006247 3.3e-19 98.2 61 78.7
MD12G1046700 Malus domestica HOM05D004834 ORTHO05D006247 3.3e-19 98.2 61 83.6
Sed0002421 Sechium edule HOM05D004834 ORTHO05D006247 3.3e-19 98.2 61 78.7
arahy.Tifrunner.gnm1.ann1.5D1K5R Arachis hypogaea HOM05D004834 ORTHO05D006247 4.3e-19 97.8 61 82.0
TPR.G14418 Trifolium pratense HOM05D004834 ORTHO05D006247 4.3e-19 97.8 59 81.4
AUR62036303 Chenopodium quinoa HOM05D004834 ORTHO05D006247 5.6e-19 97.4 61 78.7
AUR62038413 Chenopodium quinoa HOM05D004834 ORTHO05D006247 5.6e-19 97.4 61 78.7
ClCG10G017910 Citrullus lanatus HOM05D004834 ORTHO05D006247 5.6e-19 97.4 59 83.1
Sc01g0005240 Simmondsia chinensis HOM05D004834 ORTHO05D006247 5.6e-19 97.4 61 78.7
A10p29810 Brassica napus HOM05D004834 ORTHO05D006247 1.6e-18 95.9 61 77.0
C09p70190 Brassica napus HOM05D004834 ORTHO05D006247 1.6e-18 95.9 61 77.0
BolC9t59763H Brassica oleracea HOM05D004834 ORTHO05D006247 1.6e-18 95.9 61 77.0
MD14G1045600 Malus domestica HOM05D004834 ORTHO05D006247 1.6e-18 95.9 63 77.8
Sp6g36280 Schrenkiella parvula HOM05D004834 ORTHO05D006247 2.1e-18 95.5 61 77.0
Aa31sc167G60 Aethionema arabicum HOM05D004834 ORTHO05D006247 2.8e-18 95.1 61 77.0
Hund10783 Selenicereus undatus HOM05D004834 ORTHO05D006247 4.7e-18 94.4 61 75.4
ATR0697G015 Amborella trichopoda HOM05D004834 ORTHO05D006247 6.2e-18 94.0 61 78.7
CBR_g48275 Chara braunii HOM05D004834 ORTHO05D006247 1.4e-17 92.8 77 62.3
BraA10t45020Z Brassica rapa HOM05D004834 ORTHO05D006247 2.4e-17 92.0 61 75.4
Mapoly0056s0055 Marchantia polymorpha HOM05D004834 ORTHO05D006247 6.8e-17 90.5 61 77.0
AagrBONN_evm.TU.Sc2ySwM_228.4653 Anthoceros agrestis HOM05D004834 ORTHO05D006247 2.6e-16 88.6 61 73.8
Pp3c24_4090 Physcomitrium patens HOM05D004834 ORTHO05D006247 3.8e-15 84.7 61 72.1
Pp3c20_18170 Physcomitrium patens HOM05D004834 ORTHO05D006247 7.1e-14 80.5 61 68.9
Nitab4.5_0000670g0070 Nicotiana tabacum HOM05D004834 ORTHO05D006247 9.0e-09 63.5 39 76.9


User provided reference genes

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