Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0395721 Helianthus annuus HOM05D000580 ORTHO05D001785 9.0e-65 250.0 116 100.0
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 3.1e-49 198.4 93 98.9
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 3.1e-49 198.4 93 98.9
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 3.1e-49 198.4 93 98.9
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-49 198.0 93 97.8
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 5.3e-49 197.6 93 96.8
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 6.9e-49 197.2 93 97.8
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.2e-48 196.4 93 96.8
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.5e-48 196.1 93 95.7
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 4.5e-48 194.5 91 98.9
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 4.5e-48 194.5 91 98.9
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 4.5e-48 194.5 91 98.9
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 4.5e-48 194.5 91 98.9
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 5.9e-48 194.1 93 96.8
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 5.9e-48 194.1 93 96.8
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.7e-47 192.6 93 94.6
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.7e-47 192.6 90 98.9
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.2e-47 192.2 93 94.6
HanXRQChr10g0283661 Helianthus annuus HOM05D000580 ORTHO05D001785 3.8e-47 191.4 93 94.6
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.5e-47 190.7 89 98.9
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 8.5e-47 190.3 93 94.6
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 1.9e-46 189.1 93 93.5
Gorai.009G350200 Gossypium raimondii HOM05D000580 ORTHO05D001785 1.9e-46 189.1 88 98.9
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 7.2e-46 187.2 93 94.6
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-45 186.4 93 93.5
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 3.6e-45 184.9 87 97.7
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 3.6e-45 184.9 87 97.7
BolSC49t61166H Brassica oleracea HOM05D000580 ORTHO05D001785 2.0e-43 179.1 84 98.8
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 2.0e-43 179.1 93 89.2
Mapoly4043s0001 Marchantia polymorpha HOM05D000580 ORTHO05D001785 9.7e-43 176.8 85 95.3
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 2.2e-42 175.6 91 85.7
Gorai.007G064400 Gossypium raimondii HOM05D000580 ORTHO05D001785 3.7e-42 174.9 90 91.1
Potri.013G088900 Populus trichocarpa HOM05D000580 ORTHO05D001785 4.8e-42 174.5 93 87.1
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 1.8e-41 172.6 87 90.8
CAN.G1185.3 Capsicum annuum HOM05D000580 ORTHO05D001785 6.5e-39 164.1 85 91.8
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.2e-38 161.4 75 97.3
BNapus_Darmor_BZH_scaffold_253p00320 Brassica napus HOM05D000580 ORTHO05D001785 1.6e-37 159.5 107 73.8
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 1.6e-37 159.5 74 98.6
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.6e-37 159.5 74 98.6
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 1.6e-37 159.5 74 98.6
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 1.6e-37 159.5 74 98.6
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 7.9e-37 157.1 74 97.3
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.0e-36 155.2 74 95.9
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.0e-36 155.2 74 95.9
HanXRQChr17g0570211 Helianthus annuus HOM05D000580 ORTHO05D001785 3.0e-36 155.2 76 94.7
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 3.0e-36 155.2 74 95.9
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 2.6e-35 152.1 72 98.6
Glyma.15G114600 Glycine max HOM05D000580 ORTHO05D001785 3.3e-35 151.8 74 93.2
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 1.7e-34 149.4 74 93.2
Eucgr.E04205 Eucalyptus grandis HOM05D000580 ORTHO05D001785 4.8e-34 147.9 74 90.5
BolSC29t60630H Brassica oleracea HOM05D000580 ORTHO05D001785 2.4e-33 145.6 67 98.5
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 9.1e-33 143.7 98 75.5
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 3.5e-32 141.7 67 98.5
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 5.0e-31 137.9 91 73.6
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 2.1e-29 132.5 93 73.1
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 1.8e-28 129.4 93 72.0
Carub.0006s2563 Capsella rubella HOM05D000580 ORTHO05D001785 1.8e-28 129.4 60 98.3
Lalb_Chr18g0049341 Lupinus albus HOM05D000580 ORTHO05D001785 5.2e-28 127.9 74 81.1
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 6.7e-28 127.5 93 71.0
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.3e-27 125.2 69 82.6
Solyc01g017430.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 7.4e-27 124.0 93 65.6
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 2.8e-26 122.1 59 98.3
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.7e-23 112.8 66 83.3
Lalb_Chr03g0039291 Lupinus albus HOM05D000580 ORTHO05D001785 5.0e-23 111.3 57 89.5
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 1.1e-22 110.2 53 98.1
Hma1.2p1_0218F.1_g092740 Hydrangea macrophylla HOM05D000580 ORTHO05D001785 1.5e-22 109.8 93 63.4
BolSC46t61017H Brassica oleracea HOM05D000580 ORTHO05D001785 3.2e-22 108.6 65 83.1
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 4.2e-22 108.2 60 86.7
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-21 106.3 54 90.7
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.7e-21 105.5 61 85.2
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 3.6e-21 105.1 60 83.3
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 3.6e-21 105.1 60 83.3
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 4.7e-21 104.8 51 94.1
BraSC103t45481Z Brassica rapa HOM05D000580 ORTHO05D001785 5.2e-20 101.3 49 95.9
Lsat_1_v5_gn_8_161300 Lactuca sativa HOM05D000580 ORTHO05D001785 8.8e-20 100.5 81 65.4
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 4.4e-19 98.2 57 82.5
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 9.7e-19 97.1 57 80.7
Ciclev10003610m.g Citrus clementina HOM05D000580 ORTHO05D001785 1.4e-17 93.2 49 89.8
Migut.D01367 Erythranthe guttata HOM05D000580 ORTHO05D001785 5.3e-17 91.3 41 100.0
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 7.0e-17 90.9 43 97.7
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 7.0e-17 90.9 43 97.7
Gohir.A07G130966 Gossypium hirsutum HOM05D000580 ORTHO05D001785 9.1e-17 90.5 43 95.3
BolC7t41712H Brassica oleracea HOM05D000580 ORTHO05D001785 3.5e-16 88.6 38 97.4
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 3.5e-16 88.6 44 93.2
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 4.5e-16 88.2 42 97.6
CAN.G1367.7 Capsicum annuum HOM05D000580 ORTHO05D001785 2.5e-14 82.4 38 97.4
arahy.Tifrunner.gnm1.ann1.BY1G47 Arachis hypogaea HOM05D000743 ORTHO05D001785 7.2e-14 80.9 38 94.7
BraSC103t45448Z Brassica rapa HOM05D000580 ORTHO05D001785 1.8e-12 76.3 35 97.1
HanXRQChr05g0152591 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-12 76.3 35 97.1
HanXRQChr12g0369831 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-12 76.3 35 97.1
HanXRQChr16g0513491 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-12 76.3 35 97.1
Nn8g40935 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.8e-12 76.3 35 97.1
SalBow1G5124 Salvia bowleyana HOM05D000580 ORTHO05D001785 1.8e-12 76.3 35 97.1
HanXRQChr16g0529051 Helianthus annuus HOM05D000580 ORTHO05D001785 5.2e-12 74.7 35 94.3
Sc15g0001500 Simmondsia chinensis HOM05D000580 ORTHO05D001785 1.2e-11 73.6 33 97.0
CAN.G219.33 Capsicum annuum HOM05D000580 ORTHO05D001785 2.0e-11 72.8 35 91.4
Gorai.001G191300 Gossypium raimondii HOM05D000580 ORTHO05D001785 3.4e-11 72.0 36 86.1
Sopen05g009050 Solanum pennellii HOM05D000580 ORTHO05D001785 4.4e-11 71.6 38 84.2
Medtr2g021500 Medicago truncatula HOM05D000580 ORTHO05D001785 1.7e-10 69.7 54 63.0
EL10Ac5g11666 Beta vulgaris HOM05D000580 ORTHO05D001785 1.1e-09 67.0 38 81.6
CAN.G77.5 Capsicum annuum HOM05D000580 ORTHO05D001785 3.8e-07 58.5 28 89.3
Lalb_Chr18g0049681 Lupinus albus HOM05D000580 ORTHO05D001785 3.8e-07 58.5 35 77.1


User provided reference genes

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