Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 1.8e-29 131.7 58 100.0
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 3.4e-20 100.9 53 84.9
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 4.4e-20 100.5 53 84.9
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 9.8e-20 99.4 53 84.9
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 9.8e-20 99.4 53 84.9
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.7e-19 98.6 53 84.9
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 6.4e-19 96.7 53 79.2
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 3.2e-18 94.4 56 73.2
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 4.1e-18 94.0 53 79.2
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 7.0e-18 93.2 53 71.7
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 2.0e-17 91.7 53 71.7
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 2.7e-17 91.3 53 71.7
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 2.7e-17 91.3 53 75.5
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 3.5e-17 90.9 53 69.8
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 3.5e-17 90.9 53 69.8
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 3.5e-17 90.9 53 75.5
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.5e-17 90.9 53 75.5
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.5e-17 90.9 53 75.5
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 4.6e-17 90.5 53 75.5
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 6.0e-17 90.1 53 75.5
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 6.0e-17 90.1 57 71.9
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 6.0e-17 90.1 53 71.7
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 7.8e-17 89.7 53 75.5
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.0e-16 89.4 53 75.5
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.3e-16 89.0 53 71.7
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 1.3e-16 89.0 53 73.6
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 1.7e-16 88.6 53 71.7
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 2.3e-16 88.2 53 71.7
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 2.3e-16 88.2 53 71.7
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.3e-16 88.2 53 69.8
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 2.3e-16 88.2 53 69.8
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 2.3e-16 88.2 53 69.8
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 2.3e-16 88.2 53 69.8
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 2.3e-16 88.2 53 69.8
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 3.0e-16 87.8 53 71.7
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 3.0e-16 87.8 53 73.6
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.0e-16 87.8 50 72.0
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 3.9e-16 87.4 53 73.6
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.9e-16 87.4 53 73.6
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 3.9e-16 87.4 53 67.9
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 3.9e-16 87.4 53 71.7
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 3.9e-16 87.4 53 67.9
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 5.0e-16 87.0 53 71.7
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 5.0e-16 87.0 53 69.8
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 6.6e-16 86.7 50 70.0
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 6.6e-16 86.7 53 67.9
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 6.6e-16 86.7 53 69.8
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 6.6e-16 86.7 53 71.7
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 6.6e-16 86.7 53 73.6
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 8.6e-16 86.3 53 69.8
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.6e-16 86.3 53 69.8
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.6e-16 86.3 53 69.8
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 8.6e-16 86.3 53 69.8
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.6e-16 86.3 53 69.8
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 8.6e-16 86.3 53 71.7
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 8.6e-16 86.3 53 67.9
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.5e-15 85.5 53 71.7
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 1.5e-15 85.5 53 67.9
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.5e-15 85.5 53 69.8
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 1.9e-15 85.1 53 67.9
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.9e-15 85.1 53 69.8
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 1.9e-15 85.1 53 67.9
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 3.3e-15 84.3 53 67.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 3.3e-15 84.3 53 67.9
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 3.3e-15 84.3 53 67.9
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 3.3e-15 84.3 53 67.9
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 3.3e-15 84.3 53 67.9
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 3.3e-15 84.3 53 67.9
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 4.3e-15 84.0 53 71.7
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 4.3e-15 84.0 53 67.9
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 4.3e-15 84.0 53 71.7
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 5.6e-15 83.6 53 69.8
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 5.6e-15 83.6 53 67.9
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 7.3e-15 83.2 53 67.9
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 7.3e-15 83.2 53 67.9
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 9.5e-15 82.8 53 69.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 9.5e-15 82.8 54 68.5
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.6e-14 82.0 53 66.0
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 2.8e-14 81.3 53 67.9
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 3.6e-14 80.9 53 66.0
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 3.6e-14 80.9 53 64.2
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 4.7e-14 80.5 53 67.9
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 8.1e-14 79.7 53 62.3
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 8.1e-14 79.7 53 62.3
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 8.1e-14 79.7 53 64.2
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 1.1e-13 79.3 53 64.2
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.4e-13 79.0 53 64.2
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 3.1e-13 77.8 49 65.3
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 1.5e-12 75.5 53 62.3
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.5e-12 75.5 53 60.4
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 2.6e-12 74.7 53 60.4
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.3e-11 72.4 53 60.4
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 2.2e-11 71.6 53 60.4
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 3.7e-11 70.9 53 56.6
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 3.7e-11 70.9 53 56.6
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 3.2e-10 67.8 53 56.6
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 4.1e-10 67.4 55 52.7


User provided reference genes

Program Settings