Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 2.0e-91 339.0 159 100.0
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 2.8e-56 222.2 145 80.7
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 3.3e-41 172.2 160 60.6
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 7.5e-38 161.0 142 64.1
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 8.1e-32 141.0 108 65.7
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.2e-27 127.1 158 46.8
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.6e-27 126.7 108 60.2
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 2.7e-27 125.9 155 47.1
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 3.5e-27 125.6 108 58.3
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 4.6e-27 125.2 154 48.1
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 4.6e-27 125.2 108 57.4
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 6.0e-27 124.8 107 56.1
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 6.0e-27 124.8 107 56.1
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 7.8e-27 124.4 108 58.3
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 1.0e-26 124.0 158 46.8
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 1.7e-26 123.2 108 57.4
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.7e-26 123.2 108 57.4
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.7e-26 123.2 108 57.4
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 3.0e-26 122.5 108 56.5
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 5.1e-26 121.7 151 49.0
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 8.6e-26 120.9 125 49.6
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 8.6e-26 120.9 108 56.5
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.1e-25 120.6 108 56.5
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.1e-25 120.6 108 55.6
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.9e-25 119.8 108 55.6
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.9e-25 119.8 150 50.0
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.9e-25 119.8 108 58.3
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 2.5e-25 119.4 108 56.5
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 2.5e-25 119.4 108 56.5
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 2.5e-25 119.4 108 54.6
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 3.3e-25 119.0 151 48.3
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 3.3e-25 119.0 151 48.3
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 4.3e-25 118.6 108 55.6
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 5.6e-25 118.2 109 56.0
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 5.6e-25 118.2 108 55.6
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 5.6e-25 118.2 151 47.7
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 9.6e-25 117.5 129 50.4
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 9.6e-25 117.5 107 55.1
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 1.2e-24 117.1 108 55.6
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 1.6e-24 116.7 134 47.8
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.6e-24 116.7 151 48.3
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.1e-24 116.3 148 45.3
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.8e-24 115.9 108 51.9
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 2.8e-24 115.9 108 53.7
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 3.6e-24 115.5 106 54.7
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 3.6e-24 115.5 108 53.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 6.2e-24 114.8 108 52.8
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 1.1e-23 114.0 108 54.6
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.4e-23 113.6 108 53.7
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.4e-23 113.6 108 52.8
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.8e-23 113.2 108 53.7
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.4e-23 112.8 108 50.9
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 2.4e-23 112.8 106 54.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 4.0e-23 112.1 106 53.8
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 5.2e-23 111.7 106 53.8
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 6.8e-23 111.3 151 47.7
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 6.8e-23 111.3 151 47.7
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.2e-22 110.5 108 51.9
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 1.5e-22 110.2 132 52.3
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 2.6e-22 109.4 108 50.9
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 3.4e-22 109.0 111 49.5
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 3.4e-22 109.0 153 47.1
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 4.4e-22 108.6 152 41.4
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 5.8e-22 108.2 108 50.0
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 5.8e-22 108.2 108 50.0
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 7.6e-22 107.8 108 50.9
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 9.9e-22 107.5 108 49.1
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 9.9e-22 107.5 106 51.9
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 9.9e-22 107.5 106 51.9
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.3e-21 107.1 108 50.0
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.7e-21 106.7 108 50.0
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 2.9e-21 105.9 126 51.6
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 3.8e-21 105.5 128 44.5
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.8e-21 105.5 144 45.1
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 3.8e-21 105.5 144 45.1
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 6.4e-21 104.8 123 45.5
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 1.1e-20 104.0 108 48.1
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.1e-20 104.0 147 42.9
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 1.4e-20 103.6 110 52.7
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 1.9e-20 103.2 108 46.3
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.4e-20 102.8 108 45.4
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 3.2e-20 102.4 108 46.3
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 9.3e-20 100.9 108 46.3
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 1.2e-19 100.5 108 48.1
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 1.2e-19 100.5 107 47.7
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 1.6e-19 100.1 108 50.0
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 2.1e-19 99.8 108 44.4
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 7.8e-19 97.8 107 45.8
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 1.0e-18 97.4 108 45.4
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.0e-18 97.4 108 45.4
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 2.3e-18 96.3 108 44.4
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 2.3e-18 96.3 108 44.4
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 2.3e-18 96.3 108 44.4
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 2.3e-18 96.3 108 44.4
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 2.3e-18 96.3 108 44.4
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 2.3e-18 96.3 108 44.4
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 3.0e-18 95.9 107 46.7
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 8.7e-18 94.4 130 45.4
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 1.1e-17 94.0 107 43.9
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 4.3e-17 92.0 110 46.4
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 3.0e-10 69.3 104 37.5
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 5.8e-06 55.1 58 46.6


User provided reference genes

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