Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0366371 Helianthus annuus HOM05D004403 ORTHO05D019398 3.1e-72 275.0 137 100.0
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 2.0e-15 86.3 48 81.2
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 4.5e-15 85.1 48 81.2
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 4.5e-15 85.1 48 81.2
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 6.5e-14 81.3 48 75.0
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 1.1e-13 80.5 55 67.3
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 1.5e-13 80.1 50 70.0
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 1.9e-13 79.7 122 41.8
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 1.9e-13 79.7 47 76.6
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 3.2e-13 79.0 48 72.9
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 4.2e-13 78.6 48 70.8
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 4.2e-13 78.6 47 74.5
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.2e-13 78.6 47 74.5
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.2e-13 78.6 47 74.5
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.2e-13 78.6 47 74.5
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.2e-13 78.6 47 74.5
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.2e-13 78.6 47 74.5
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 4.2e-13 78.6 47 74.5
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 5.5e-13 78.2 48 68.8
COL.COLO4_14184 Corchorus olitorius HOM05D004403 ORTHO05D006164 5.5e-13 78.2 47 72.3
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 5.5e-13 78.2 47 72.3
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 5.5e-13 78.2 48 66.7
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 7.2e-13 77.8 48 68.8
Cpa.g.sc3.267 Carica papaya HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 70.2
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
TAR375G1017 Trochodendron aralioides HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 70.2
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 7.2e-13 77.8 47 72.3
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 9.4e-13 77.4 47 72.3
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 9.4e-13 77.4 48 68.8
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 9.4e-13 77.4 47 72.3
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 9.4e-13 77.4 122 41.8
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 9.4e-13 77.4 47 72.3
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 9.4e-13 77.4 47 70.2
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 9.4e-13 77.4 54 64.8
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 9.4e-13 77.4 62 61.3
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 1.2e-12 77.0 47 74.5
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 1.2e-12 77.0 47 74.5
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 1.2e-12 77.0 47 70.2
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 1.2e-12 77.0 47 70.2
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 1.2e-12 77.0 48 68.8
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 1.2e-12 77.0 48 68.8
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 1.6e-12 76.6 47 70.2
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.6e-12 76.6 54 63.0
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 1.6e-12 76.6 50 64.0
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 1.6e-12 76.6 47 74.5
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 1.6e-12 76.6 47 72.3
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 2.1e-12 76.3 47 70.2
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 2.1e-12 76.3 48 70.8
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 2.1e-12 76.3 124 39.5
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 2.1e-12 76.3 47 72.3
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 2.1e-12 76.3 54 61.1
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 2.7e-12 75.9 47 68.1
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 2.7e-12 75.9 47 70.2
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 2.7e-12 75.9 47 68.1
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 2.7e-12 75.9 47 68.1
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 3.6e-12 75.5 47 70.2
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 3.6e-12 75.5 48 68.8
Psat1g115120 Pisum sativum HOM05D004403 ORTHO05D006164 3.6e-12 75.5 47 72.3
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 3.6e-12 75.5 54 64.8
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 4.7e-12 75.1 48 68.8
TPR.G10680 Trifolium pratense HOM05D004403 ORTHO05D006164 6.1e-12 74.7 47 70.2
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 8.0e-12 74.3 55 65.5
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 8.0e-12 74.3 55 63.6
Nitab4.5_0000072g0400 Nicotiana tabacum HOM05D004403 ORTHO05D006164 8.0e-12 74.3 47 68.1
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 8.0e-12 74.3 48 68.8
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 1.0e-11 73.9 60 56.7
ClCG09G013370 Citrullus lanatus HOM05D004403 ORTHO05D019398 1.4e-11 73.6 42 76.2
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 1.8e-11 73.2 55 65.5
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 2.3e-11 72.8 54 63.0
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 2.3e-11 72.8 54 63.0
HanXRQChr14g0451751 Helianthus annuus HOM05D004403 ORTHO05D019398 6.8e-11 71.2 34 100.0
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 8.8e-11 70.9 54 61.1
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 8.8e-11 70.9 47 63.8
Atru.chr1.4080 Acer truncatum HOM05D004403 ORTHO05D019398 1.5e-10 70.1 47 66.0
MD07G1258300 Malus domestica HOM05D004403 ORTHO05D006164 1.5e-10 70.1 47 66.0
RhsimUnG0154200 Rhododendron simsii HOM05D000504 ORTHO05D000403 1.5e-10 70.1 53 62.3
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 2.0e-10 69.7 54 59.3
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 2.0e-10 69.7 54 59.3
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 2.0e-10 69.7 54 59.3
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 2.0e-10 69.7 54 59.3
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 2.0e-10 69.7 54 59.3
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 2.0e-10 69.7 54 59.3
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 2.0e-10 69.7 47 63.8
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 2.0e-10 69.7 54 59.3
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 2.0e-10 69.7 46 65.2
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 2.0e-10 69.7 46 65.2
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 2.6e-10 69.3 54 59.3
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 3.4e-10 68.9 47 63.8
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 3.4e-10 68.9 46 67.4
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 3.4e-10 68.9 55 58.2
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 3.4e-10 68.9 127 36.2
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 5.7e-10 68.2 54 57.4
CDE12G0311 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 5.7e-10 68.2 47 66.0
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 5.7e-10 68.2 54 59.3
CARHR264420 Cardamine hirsuta HOM05D004403 ORTHO05D006164 7.5e-10 67.8 55 56.4
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 8.3e-09 64.3 50 56.0
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 2.0e-07 59.7 55 50.9
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 2.7e-07 59.3 61 42.6
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 7.7e-07 57.8 54 51.9
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 7.7e-07 57.8 57 47.4
HanXRQChr16g0516911 Helianthus annuus HOM05D000779 ORTHO05D000246 7.7e-07 57.8 92 45.7
Duzib068G0276 Durio zibethinus HOM05D004403 ORTHO05D006164 2.9e-06 55.8 39 61.5


User provided reference genes

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