Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 7.3e-260 900.2 510 100.0
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 4.8e-179 631.7 362 84.0
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 1.2e-161 573.9 373 75.6
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 9.6e-127 458.0 358 61.2
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 4.4e-124 449.1 436 54.6
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 3.3e-119 433.0 332 62.3
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 7.3e-119 431.8 457 51.0
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 5.3e-117 425.6 363 57.9
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.8e-116 422.2 353 56.7
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 9.9e-116 421.4 371 55.5
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 2.9e-115 419.9 369 56.1
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.9e-114 417.2 359 56.3
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 3.2e-114 416.4 353 56.9
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 2.1e-113 413.7 393 53.9
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 1.8e-112 410.6 461 49.7
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 8.7e-112 408.3 355 56.9
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.1e-111 407.9 360 56.4
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 1.5e-111 407.5 341 54.5
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 9.6e-111 404.8 469 46.7
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.3e-110 404.4 444 47.7
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.1e-110 403.7 323 58.5
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 2.8e-110 403.3 374 51.9
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 4.8e-110 402.5 344 53.5
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.8e-110 402.5 344 53.5
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 6.2e-110 402.1 343 53.6
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 6.2e-110 402.1 356 55.6
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 1.1e-109 401.4 368 55.2
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.8e-109 400.6 367 50.7
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 2.4e-109 400.2 361 55.1
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 3.1e-109 399.8 453 46.8
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 9.0e-109 398.3 382 51.8
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.6e-108 396.7 326 57.7
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 4.5e-108 396.0 364 51.1
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 7.6e-108 395.2 383 49.9
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.6e-108 395.2 355 55.2
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 7.6e-108 395.2 465 46.5
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.7e-107 394.0 468 46.4
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 2.2e-107 393.7 416 50.2
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 3.8e-107 392.9 437 47.6
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.9e-107 392.5 447 46.5
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 4.9e-107 392.5 368 52.4
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 4.9e-107 392.5 348 52.6
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 4.9e-107 392.5 401 50.1
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 8.4e-107 391.7 441 48.5
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.9e-106 390.6 387 51.9
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.4e-106 390.2 338 55.3
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 5.5e-106 389.0 383 49.9
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 7.1e-106 388.7 357 54.1
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 9.3e-106 388.3 299 58.9
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 1.2e-105 387.9 355 50.7
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 3.5e-105 386.3 341 54.8
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 6.0e-105 385.6 452 46.5
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 6.0e-105 385.6 445 46.3
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 1.0e-104 384.8 336 54.8
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.3e-104 383.6 411 48.7
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 3.0e-104 383.3 390 50.3
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.1e-103 381.3 329 55.6
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.1e-103 381.3 404 48.3
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.1e-103 381.3 451 47.0
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.5e-103 380.9 428 45.3
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.9e-103 380.6 404 48.3
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.9e-103 380.6 368 53.3
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 2.5e-103 380.2 329 55.6
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 5.6e-103 379.0 360 51.7
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 7.4e-103 378.6 384 50.3
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 2.1e-102 377.1 361 49.3
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 2.8e-102 376.7 361 49.3
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 3.7e-102 376.3 340 52.1
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 6.2e-102 375.6 369 49.9
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 6.2e-102 375.6 372 51.3
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.4e-101 374.4 307 55.0
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 3.1e-101 373.2 441 44.9
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.1e-101 373.2 355 52.7
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 5.3e-101 372.5 359 51.8
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 5.3e-101 372.5 333 54.7
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 1.2e-100 371.3 302 57.0
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.2e-100 371.3 333 52.9
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.0e-100 370.5 464 45.0
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 7.6e-100 368.6 375 50.9
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 6.5e-99 365.5 399 46.1
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 6.5e-99 365.5 368 50.8
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.5e-98 363.6 459 44.9
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.5e-98 363.6 299 55.9
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 4.2e-98 362.8 368 50.5
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.2e-97 361.3 369 50.4
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 2.7e-97 360.1 461 45.3
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 3.5e-97 359.8 460 45.2
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 4.6e-97 359.4 461 45.1
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 1.3e-96 357.8 442 45.9
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 1.5e-95 354.4 349 49.3
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.3e-94 351.3 350 50.3
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 2.4e-93 347.1 350 48.6
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 6.9e-93 345.5 355 49.3
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 9.0e-93 345.1 307 53.7
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.5e-92 344.4 370 49.2
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 2.0e-92 344.0 371 48.2
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.4e-92 343.2 500 41.6
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 4.5e-92 342.8 454 43.8
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.7e-91 340.9 344 49.4
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 2.2e-91 340.5 244 64.8
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.8e-91 339.7 361 48.8
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 5.0e-91 339.3 344 49.1
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.1e-89 334.0 311 52.4
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.7e-89 333.6 334 49.4
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.7e-89 333.6 374 46.0
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.4e-88 331.3 383 46.0
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 5.1e-88 329.3 371 47.4
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 5.1e-88 329.3 362 49.2
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 5.7e-87 325.9 421 45.8
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 7.4e-87 325.5 266 57.5
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.3e-86 324.7 385 45.5
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.8e-86 323.6 271 55.4
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 4.8e-86 322.8 369 46.6
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 4.8e-86 322.8 441 42.0
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 6.3e-86 322.4 463 41.5
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.1e-85 321.6 362 45.9
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 1.8e-85 320.9 465 41.5
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 2.4e-85 320.5 288 51.0
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 4.1e-85 319.7 463 41.5
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.2e-84 318.2 364 47.5
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 7.7e-84 315.5 407 42.8
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 1.1e-82 311.6 350 46.0
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.9e-82 310.8 378 44.7
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 7.2e-82 308.9 470 38.7
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.6e-81 307.8 386 43.3
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.1e-81 307.4 386 43.3
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.1e-81 307.4 341 45.5
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.6e-81 306.6 386 43.3
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.3e-80 303.9 275 53.1
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.1e-79 301.6 474 39.5
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.1e-79 301.6 489 38.2
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 1.5e-79 301.2 492 37.8
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 1.4e-77 294.7 413 41.2
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.8e-77 294.3 486 37.2
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 7.0e-77 292.4 451 38.4
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 7.7e-76 288.9 486 36.8
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 4.2e-74 283.1 338 42.3
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 3.7e-70 270.0 320 40.0
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.8e-70 269.6 426 39.7
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.7e-67 261.2 324 40.4
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 5.0e-67 259.6 359 40.4
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 8.8e-64 248.8 337 40.9
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.2e-63 248.4 229 52.4
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.7e-62 244.6 275 45.5
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.1e-61 240.0 313 40.9
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.0e-61 239.2 313 40.9
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.0e-60 237.7 313 40.9
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 3.2e-58 230.3 361 35.5
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.6e-57 228.0 290 41.4
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 1.7e-54 218.0 343 34.1
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 4.8e-54 216.5 301 35.5
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.9e-52 209.5 210 45.7
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.7e-51 208.0 270 38.5
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.8e-51 206.8 312 34.3
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.2e-50 203.4 191 45.5
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 1.2e-49 201.8 271 38.0
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 6.1e-49 199.5 265 39.2
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 6.1e-49 199.5 265 39.2
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 2.3e-48 197.6 317 37.5
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.8e-41 174.1 130 56.2
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.9e-38 163.3 148 53.4
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 5.4e-37 159.8 230 40.4
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.2e-33 148.7 161 48.4
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 2.3e-32 144.4 126 55.6
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.7e-30 137.1 118 56.8
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.0e-29 132.9 164 40.2
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.3e-27 127.9 79 65.8
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 8.6e-27 125.9 259 32.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 1.4e-24 118.6 114 45.6
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.4e-23 114.0 111 52.3
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 2.8e-17 94.4 283 26.9
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 1.4e-16 92.0 65 56.9
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.4e-16 91.3 87 51.7
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.4e-07 60.8 103 36.9
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 7.6e-07 59.7 76 42.1


User provided reference genes

Program Settings