Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0357391 Helianthus annuus HOM05D003156 ORTHO05D003508 8.3e-91 337.0 172 100.0
HanXRQChr14g0457261 Helianthus annuus HOM05D003156 ORTHO05D003508 4.7e-62 241.5 134 92.5
HanXRQChr11g0323301 Helianthus annuus HOM05D003156 ORTHO05D003508 8.7e-48 194.1 134 73.9
Lsat_1_v5_gn_2_113740 Lactuca sativa HOM05D003156 ORTHO05D003508 3.4e-36 155.6 135 60.0
ECA238G0789 Erigeron canadensis HOM05D003156 ORTHO05D003508 1.0e-35 154.1 135 60.7
Lsat_1_v5_gn_2_113780 Lactuca sativa HOM05D003156 ORTHO05D003508 7.1e-34 147.9 135 58.5
Dinv31359 Davidia involucrata HOM05D003156 ORTHO05D003508 1.5e-31 140.2 134 57.5
Potri.010G220000 Populus trichocarpa HOM05D003156 ORTHO05D003508 1.6e-30 136.7 135 55.6
QL08p056552 Quercus lobata HOM05D003156 ORTHO05D003508 1.6e-30 136.7 132 57.6
TAR081G0003 Trochodendron aralioides HOM05D003156 ORTHO05D003508 1.6e-30 136.7 135 52.6
Dinv11794 Davidia involucrata HOM05D003156 ORTHO05D003508 2.8e-30 136.0 134 55.2
Lj1C919T3 Lonicera japonica HOM05D003156 ORTHO05D003508 3.7e-30 135.6 132 56.1
CANSAT56G0537 Cannabis sativa HOM05D003156 ORTHO05D003508 8.2e-30 134.4 169 51.5
Potri.008G041900 Populus trichocarpa HOM05D003156 ORTHO05D003508 1.1e-29 134.0 134 54.5
GSVIVG01016309001 Vitis vinifera HOM05D003156 ORTHO05D003508 1.8e-29 133.3 133 55.6
Ciclev10030482m.g Citrus clementina HOM05D003156 ORTHO05D003508 3.1e-29 132.5 133 56.4
Sabra10G0169800 Salix brachista HOM05D003156 ORTHO05D003508 3.1e-29 132.5 135 54.8
Cfa001606 Carpinus fangiana HOM05D003156 ORTHO05D003508 4.1e-29 132.1 133 56.4
Nn2g13035 Nelumbo nucifera HOM05D003156 ORTHO05D003508 4.1e-29 132.1 135 52.6
Prupe.2G215600 Prunus persica HOM05D003156 ORTHO05D003508 4.1e-29 132.1 134 57.5
MD12G1111500 Malus domestica HOM05D003156 ORTHO05D003508 1.5e-28 130.2 132 55.3
DCAR_006452 Daucus carota HOM05D003156 ORTHO05D003508 2.0e-28 129.8 131 55.0
TWI15G0830 Tripterygium wilfordii HOM05D003156 ORTHO05D003508 2.0e-28 129.8 169 48.5
Gohir.D13G023500 Gossypium hirsutum HOM05D003156 ORTHO05D003508 2.6e-28 129.4 135 55.6
CiPaw.02G175200 Carya illinoinensis HOM05D003156 ORTHO05D003508 3.4e-28 129.0 134 53.7
Duzib114G0389 Durio zibethinus HOM05D003156 ORTHO05D003508 3.4e-28 129.0 135 51.9
Gorai.013G026300 Gossypium raimondii HOM05D003156 ORTHO05D003508 3.4e-28 129.0 135 54.8
CSS0022533 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 5.9e-28 128.3 132 57.6
MD01G1110800 Malus domestica HOM05D003156 ORTHO05D003508 5.9e-28 128.3 132 55.3
Nn2g10723 Nelumbo nucifera HOM05D003156 ORTHO05D003508 5.9e-28 128.3 135 49.6
TAR369G0111 Trochodendron aralioides HOM05D003156 ORTHO05D003508 5.9e-28 128.3 135 51.9
Rhsim09G0153200 Rhododendron simsii HOM05D003156 ORTHO05D003508 7.6e-28 127.9 132 53.8
CiPaw.01G274600 Carya illinoinensis HOM05D003156 ORTHO05D003508 1.0e-27 127.5 132 54.5
Atru.chr12.725 Acer truncatum HOM05D003156 ORTHO05D003508 1.7e-27 126.7 136 54.4
Manes.07G103600 Manihot esculenta HOM05D003156 ORTHO05D003508 1.7e-27 126.7 151 49.7
Duzib106G1668 Durio zibethinus HOM05D003156 ORTHO05D003508 2.2e-27 126.3 135 51.1
EL10Ac2g03591 Beta vulgaris HOM05D003156 ORTHO05D003508 2.9e-27 125.9 132 53.8
CSS0028910 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 3.8e-27 125.6 127 59.1
vmacro04882 Vaccinium macrocarpon HOM05D003156 ORTHO05D003508 5.0e-27 125.2 132 53.0
Gohir.A13G024600 Gossypium hirsutum HOM05D003156 ORTHO05D003508 8.5e-27 124.4 135 55.6
Cpa.g.sc53.53 Carica papaya HOM05D003156 ORTHO05D003508 1.1e-26 124.0 132 55.3
AUR62027953 Chenopodium quinoa HOM05D003156 ORTHO05D003508 1.1e-26 124.0 132 53.0
Hund19345 Selenicereus undatus HOM05D003156 ORTHO05D003508 1.1e-26 124.0 132 51.5
FAN06G3106 Fragaria x ananassa HOM05D003156 ORTHO05D003508 1.4e-26 123.6 132 54.5
Manes.10G044400 Manihot esculenta HOM05D003156 ORTHO05D003508 1.4e-26 123.6 132 54.5
PGR142G2490 Punica granatum HOM05D003156 ORTHO05D003508 1.4e-26 123.6 134 55.2
Actinidia38262 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.9e-26 123.2 133 55.6
FvH4_7g19850 Fragaria vesca HOM05D003156 ORTHO05D003508 3.2e-26 122.5 132 53.8
FAN03G0982 Fragaria x ananassa HOM05D003156 ORTHO05D003508 4.2e-26 122.1 132 53.0
CSS0000465 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 7.2e-26 121.3 136 53.7
AUR62020759 Chenopodium quinoa HOM05D003156 ORTHO05D003508 7.2e-26 121.3 132 52.3
FAN01G2311 Fragaria x ananassa HOM05D003156 ORTHO05D003508 9.3e-26 120.9 132 53.8
RcHm_v2.0_Chr1g0363841 Rosa chinensis HOM05D003156 ORTHO05D003508 9.3e-26 120.9 132 54.5
PSO339G2433 Papaver somniferum HOM05D003156 ORTHO05D003508 1.2e-25 120.6 135 49.6
Sc20g0001950 Simmondsia chinensis HOM05D003156 ORTHO05D003508 1.2e-25 120.6 133 49.6
TAR633G1985 Trochodendron aralioides HOM05D003156 ORTHO05D003508 1.2e-25 120.6 135 51.1
Gohir.D10G215300 Gossypium hirsutum HOM05D003156 ORTHO05D003508 2.1e-25 119.8 135 50.4
Gorai.011G240800 Gossypium raimondii HOM05D003156 ORTHO05D003508 2.1e-25 119.8 135 50.4
Sabra08G0028800 Salix brachista HOM05D003156 ORTHO05D003508 2.1e-25 119.8 134 50.7
MBI14_g09786_MAGBIO Magnolia biondii HOM05D003156 ORTHO05D003508 4.6e-25 118.6 135 49.6
PSO384G3096 Papaver somniferum HOM05D003156 ORTHO05D003508 1.3e-24 117.1 135 48.1
Lalb_Chr03g0035991 Lupinus albus HOM05D003156 ORTHO05D003508 5.1e-24 115.2 132 49.2
Actinidia38263 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.5e-23 113.6 115 54.8
COL.COLO4_23712 Corchorus olitorius HOM05D003156 ORTHO05D003508 1.5e-23 113.6 135 47.4
Glyma.20G178500 Glycine max HOM05D003156 ORTHO05D003508 1.9e-23 113.2 132 48.5
Lalb_Chr06g0162221 Lupinus albus HOM05D003156 ORTHO05D003508 3.3e-23 112.5 132 48.5
Oeu042736.1 Olea europaea HOM05D003156 ORTHO05D003508 3.3e-23 112.5 134 47.8
FAN10G3307 Fragaria x ananassa HOM05D003156 ORTHO05D003508 4.3e-23 112.1 147 49.0
Oeu007399.2 Olea europaea HOM05D003156 ORTHO05D003508 4.3e-23 112.1 132 47.0
CAN.G131.2 Capsicum annuum HOM05D003156 ORTHO05D003508 7.4e-23 111.3 132 47.7
Nitab4.5_0004081g0040 Nicotiana tabacum HOM05D003156 ORTHO05D003508 7.4e-23 111.3 132 48.5
Thecc.10G070400 Theobroma cacao HOM05D003156 ORTHO05D003508 7.4e-23 111.3 135 47.4
Aqoxy2G01803 Aquilegia oxysepala HOM05D003156 ORTHO05D003508 1.3e-22 110.5 135 48.1
Glyma.10G212600 Glycine max HOM05D003156 ORTHO05D003508 1.3e-22 110.5 151 44.4
Gohir.A10G207200 Gossypium hirsutum HOM05D003156 ORTHO05D003508 2.8e-22 109.4 135 48.9
Lj5g0023323 Lotus japonicus HOM05D003156 ORTHO05D003508 2.8e-22 109.4 136 45.6
Ah.11g043470 Amaranthus hybridus HOM05D003156 ORTHO05D003508 3.7e-22 109.0 132 50.0
Phvul.007G093100 Phaseolus vulgaris HOM05D003156 ORTHO05D003508 6.3e-22 108.2 133 48.1
Solyc04g049120.4 Solanum lycopersicum HOM05D003156 ORTHO05D003508 6.3e-22 108.2 132 47.0
Sopen04g018550 Solanum pennellii HOM05D003156 ORTHO05D003508 6.3e-22 108.2 132 47.0
Ah.10g032860 Amaranthus hybridus HOM05D003156 ORTHO05D003508 3.1e-21 105.9 132 47.7
MELO3C002897.2 Cucumis melo HOM05D003156 ORTHO05D003508 3.1e-21 105.9 132 46.2
Cc02_g11460 Coffea canephora HOM05D003156 ORTHO05D003508 5.3e-21 105.1 132 47.7
Nitab4.5_0000233g0120 Nicotiana tabacum HOM05D003156 ORTHO05D003508 5.3e-21 105.1 132 47.7
Sed0017725 Sechium edule HOM05D003156 ORTHO05D003508 5.3e-21 105.1 134 45.5
Oeu033854.1 Olea europaea HOM05D003156 ORTHO05D003508 9.1e-21 104.4 134 44.8
Eucgr.G02815 Eucalyptus grandis HOM05D003156 ORTHO05D003508 1.2e-20 104.0 133 48.1
ClCG05G020880 Citrullus lanatus HOM05D003156 ORTHO05D003508 1.5e-20 103.6 133 46.6
CsaV3_5G025770 Cucumis sativus L. HOM05D003156 ORTHO05D003508 1.5e-20 103.6 132 45.5
Medtr1g095570 Medicago truncatula HOM05D003156 ORTHO05D003508 2.0e-20 103.2 133 45.9
Lalb_Chr02g0141981 Lupinus albus HOM05D003156 ORTHO05D003508 2.6e-20 102.8 132 44.7
Peaxi162Scf00108g00911 Petunia axillaris HOM05D003156 ORTHO05D003508 3.4e-20 102.4 132 47.0
Ca_10580_v3 Cicer arietinum L. HOM05D003156 ORTHO05D003508 5.9e-20 101.7 133 47.4
TPR.G1826 Trifolium pratense HOM05D003156 ORTHO05D003508 5.9e-20 101.7 133 45.9
Lalb_Chr01g0010131 Lupinus albus HOM05D003156 ORTHO05D003508 1.0e-19 100.9 132 47.7
arahy.Tifrunner.gnm1.ann1.PUBH8J Arachis hypogaea HOM05D003156 ORTHO05D003508 1.3e-19 100.5 132 44.7
Ca_04674_v3 Cicer arietinum L. HOM05D003156 ORTHO05D003508 1.3e-19 100.5 133 45.9
Sed0022604 Sechium edule HOM05D003156 ORTHO05D003508 2.2e-19 99.8 133 43.6
MELO3C012441.2 Cucumis melo HOM05D003156 ORTHO05D003508 2.9e-19 99.4 140 45.7
PGR044G0836 Punica granatum HOM05D003156 ORTHO05D003508 2.9e-19 99.4 133 44.4
Sed0017215 Sechium edule HOM05D003156 ORTHO05D003508 2.9e-19 99.4 133 45.1
Migut.F01767 Erythranthe guttata HOM05D003156 ORTHO05D003508 8.5e-19 97.8 132 46.2
Lj2g0025480 Lotus japonicus HOM05D003156 ORTHO05D003508 1.1e-18 97.4 135 43.0
CsaV3_5G036430 Cucumis sativus L. HOM05D003156 ORTHO05D003508 1.4e-18 97.1 134 45.5
Psat6g185160 Pisum sativum HOM05D003156 ORTHO05D003508 1.9e-18 96.7 133 43.6
Oeu014390.1 Olea europaea HOM05D003156 ORTHO05D003508 2.5e-18 96.3 133 42.9
arahy.Tifrunner.gnm1.ann1.0MFP8V Arachis hypogaea HOM05D003156 ORTHO05D003508 3.2e-18 95.9 133 44.4
Zm00001eb265240 Zea mays HOM05D003156 ORTHO05D003508 9.4e-18 94.4 135 37.8
Sed0025548 Sechium edule HOM05D003156 ORTHO05D003508 1.6e-17 93.6 132 41.7
TPR.G36666 Trifolium pratense HOM05D003156 ORTHO05D003508 1.6e-17 93.6 133 43.6
Gohir.D05G297300 Gossypium hirsutum HOM05D003156 ORTHO05D003508 2.1e-17 93.2 134 45.5
Oeu043931.1 Olea europaea HOM05D003156 ORTHO05D003508 4.7e-17 92.0 131 42.0
SGA_v2.0_scaffold341G49358 Striga asiatica HOM05D003156 ORTHO05D003508 6.1e-17 91.7 127 43.3
Lalb_Chr19g0129611 Lupinus albus HOM05D003156 ORTHO05D003508 1.4e-16 90.5 135 44.4
SalBow3G0597 Salvia bowleyana HOM05D003156 ORTHO05D003508 1.4e-16 90.5 164 37.8
SalBow4G2724 Salvia bowleyana HOM05D003156 ORTHO05D003508 1.4e-16 90.5 132 45.5
CDE02G1002 Ceratophyllum demersum HOM05D003156 ORTHO05D003508 2.3e-16 89.7 135 42.2
CDE09G0617 Ceratophyllum demersum HOM05D003156 ORTHO05D003508 2.3e-16 89.7 135 40.7
Gohir.A05G297400 Gossypium hirsutum HOM05D003156 ORTHO05D003508 1.5e-15 87.0 135 40.7
THA.LOC104819148 Tarenaya hassleriana HOM05D003156 ORTHO05D003508 2.0e-15 86.7 135 38.5
HPP92_006757 Vanilla planifolia HOM05D003156 ORTHO05D003508 2.0e-15 86.7 135 38.5
MSTRG.370 Avicennia marina HOM05D003156 ORTHO05D003508 3.3e-15 85.9 127 45.7
DCAR_019123 Daucus carota HOM05D003156 ORTHO05D003508 7.4e-15 84.7 172 34.9
VMungo0464G1633 Vigna mungo HOM05D003156 ORTHO05D003508 1.3e-14 84.0 105 46.7
Carub.0005s1861 Capsella rubella HOM05D003156 ORTHO05D003508 1.7e-14 83.6 135 40.0
AL5G32840 Arabidopsis lyrata HOM05D003156 ORTHO05D003508 2.2e-14 83.2 138 40.6
AT3G52250 Arabidopsis thaliana HOM05D003156 ORTHO05D003508 3.7e-14 82.4 141 41.1
Aa31LG10G7350 Aethionema arabicum HOM05D003156 ORTHO05D003508 4.8e-14 82.0 136 38.2
VMungo1356G0001 Vigna mungo HOM05D003156 ORTHO05D003508 6.3e-14 81.6 105 45.7
Actinidia03045 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.1e-13 80.9 115 42.6
Actinidia03046 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.1e-13 80.9 108 43.5
Actinidia08029 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.1e-13 80.9 77 54.5
CARHR162010 Cardamine hirsuta HOM05D003156 ORTHO05D003508 1.1e-13 80.9 144 38.2
VMungo0720G1431 Vigna mungo HOM05D003156 ORTHO05D003508 1.4e-13 80.5 132 40.9
Zm00001eb355010 Zea mays HOM05D003156 ORTHO05D003508 1.8e-13 80.1 130 33.1
MSTRG.8149 Avicennia marina HOM05D003156 ORTHO05D003508 3.1e-13 79.3 172 38.4
BolC8t50370H Brassica oleracea HOM05D003156 ORTHO05D003508 5.3e-13 78.6 139 36.7
VMungo0464G1901 Vigna mungo HOM05D003156 ORTHO05D003508 1.2e-12 77.4 134 32.8
A09p45310 Brassica napus HOM05D003156 ORTHO05D003508 1.5e-12 77.0 139 37.4
C08p27500 Brassica napus HOM05D003156 ORTHO05D003508 1.5e-12 77.0 139 36.7
BraA09t39994Z Brassica rapa HOM05D003156 ORTHO05D003508 1.5e-12 77.0 139 37.4
Sp5g10010 Schrenkiella parvula HOM05D003156 ORTHO05D003508 2.0e-12 76.6 138 37.7
THA.LOC104806084 Tarenaya hassleriana HOM05D003156 ORTHO05D003508 2.6e-12 76.3 137 36.5
Psat7g135120 Pisum sativum HOM05D003156 ORTHO05D003508 5.9e-12 75.1 105 41.9
A03p48760 Brassica napus HOM05D003156 ORTHO05D003508 2.9e-11 72.8 141 34.0
BraA03t13976Z Brassica rapa HOM05D003156 ORTHO05D003508 2.9e-11 72.8 141 34.0
Thhalv10010054m.g Eutrema salsugineum HOM05D003156 ORTHO05D003508 5.0e-11 72.0 139 36.0
ATR0314G007 Amborella trichopoda HOM05D003156 ORTHO05D003508 6.5e-11 71.6 63 52.4
Medtr6g033350 Medicago truncatula HOM05D003156 ORTHO05D003508 1.1e-10 70.9 61 50.8
C07p46850 Brassica napus HOM05D003156 ORTHO05D003508 1.4e-10 70.5 141 32.6
BolC7t45201H Brassica oleracea HOM05D003156 ORTHO05D003508 1.4e-10 70.5 141 32.6
Pp3c7_16800 Physcomitrium patens HOM05D003156 ORTHO05D003508 2.5e-10 69.7 134 35.1
Actinidia08031 Actinidia chinensis HOM05D003156 ORTHO05D003508 9.4e-10 67.8 76 48.7
Pp3c11_8780 Physcomitrium patens HOM05D003156 ORTHO05D003508 2.1e-09 66.6 141 34.8
Pp3c11_8790 Physcomitrium patens HOM05D003156 ORTHO05D003508 2.1e-09 66.6 141 34.8
SGA_v2.0_scaffold51G18682 Striga asiatica HOM05D003156 ORTHO05D003508 2.1e-09 66.6 84 45.2
CBR_g49682 Chara braunii HOM05D000785 ORTHO05D000231 8.0e-09 64.7 149 34.2
Aa31csc81G40 Aethionema arabicum HOM05D003156 ORTHO05D003508 5.2e-08 62.0 134 34.3
Glyma.13G071701 Glycine max HOM05D003156 ORTHO05D003508 5.2e-08 62.0 81 39.5
AagrBONN_evm.TU.Sc2ySwM_228.3670 Anthoceros agrestis HOM05D003156 ORTHO05D003508 4.4e-07 58.9 99 35.4
ATR0314G009 Amborella trichopoda HOM05D003156 ORTHO05D003508 5.7e-07 58.5 72 50.0
MD07G1176800 Malus domestica HOM05D003156 ORTHO05D003508 1.3e-06 57.4 68 54.4


User provided reference genes

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