Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 2.4e-196 688.7 362 100.0
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.9e-153 546.2 382 80.1
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 2.1e-152 542.7 388 76.8
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.6e-131 473.4 364 73.4
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 7.8e-131 471.1 389 68.1
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.3e-130 470.3 364 73.1
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.1e-129 467.2 364 72.5
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 4.4e-126 455.3 388 68.3
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 6.4e-125 451.4 376 67.6
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.1e-124 450.7 385 66.0
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.4e-124 450.3 376 67.6
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.8e-124 449.9 369 68.0
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 2.4e-124 449.5 385 65.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 2.4e-124 449.5 374 68.4
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 3.2e-124 449.1 379 65.4
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 4.1e-124 448.7 388 67.0
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 7.0e-124 448.0 322 75.8
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 2.0e-123 446.4 381 65.9
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 2.7e-123 446.0 291 81.1
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 5.9e-123 444.9 379 66.8
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 5.9e-123 444.9 379 66.8
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.0e-122 444.1 384 66.4
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 2.3e-122 443.0 369 67.5
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 3.9e-122 442.2 385 64.9
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 5.0e-122 441.8 385 67.5
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 5.0e-122 441.8 371 66.8
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 6.6e-122 441.4 388 65.2
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 8.6e-122 441.0 375 66.7
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.5e-121 440.3 369 67.2
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.5e-121 440.3 369 66.9
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.9e-121 439.9 381 67.5
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.5e-121 439.5 371 66.6
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 7.3e-121 438.0 389 64.8
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.2e-120 437.2 355 68.2
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.6e-120 436.8 371 66.3
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 2.1e-120 436.4 371 65.8
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.1e-120 436.4 371 65.8
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 3.6e-120 435.6 320 75.3
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 3.6e-120 435.6 285 80.0
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 4.7e-120 435.3 278 83.1
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 6.2e-120 434.9 389 65.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 2.3e-119 433.0 320 74.7
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.3e-119 433.0 360 68.6
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.3e-119 433.0 306 76.1
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 3.1e-119 432.6 317 75.4
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 4.0e-119 432.2 291 79.7
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 6.8e-119 431.4 383 64.8
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 6.8e-119 431.4 379 65.4
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 6.8e-119 431.4 364 68.1
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.2e-118 430.6 397 64.7
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.5e-118 430.3 286 80.8
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.5e-118 430.3 375 67.7
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 2.0e-118 429.9 390 63.1
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 2.6e-118 429.5 299 77.9
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 5.8e-118 428.3 272 83.5
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 8.3e-117 424.5 268 83.2
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.6e-115 420.2 372 64.5
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 2.0e-115 419.9 280 80.0
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 7.8e-115 417.9 278 78.8
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.7e-114 416.8 388 63.4
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.7e-114 416.8 259 83.8
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 2.3e-114 416.4 290 78.3
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 3.0e-114 416.0 267 83.1
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 5.0e-114 415.2 366 62.3
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 2.5e-113 412.9 278 77.3
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 3.3e-113 412.5 363 61.7
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 4.3e-113 412.1 364 64.3
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 2.1e-112 409.8 371 62.5
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.8e-112 409.5 367 63.5
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 2.8e-112 409.5 386 61.9
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 3.6e-112 409.1 369 63.4
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 3.6e-112 409.1 364 63.2
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 6.2e-112 408.3 372 62.6
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.1e-111 407.5 270 79.3
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.4e-111 407.1 380 62.4
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 1.4e-111 407.1 368 63.6
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 2.3e-111 406.4 371 62.3
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 4.0e-111 405.6 343 67.9
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 5.2e-111 405.2 248 85.5
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 8.9e-111 404.4 298 71.5
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.3e-106 390.6 315 68.6
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.3e-106 389.8 269 74.7
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.0e-106 389.4 269 74.7
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 8.6e-106 387.9 430 55.6
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 1.9e-105 386.7 328 68.0
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 4.3e-105 385.6 268 74.6
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 1.2e-104 384.0 340 63.5
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 2.8e-104 382.9 237 86.5
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 1.5e-102 377.1 276 74.3
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 4.9e-101 372.1 278 71.2
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 5.4e-100 368.6 309 66.7
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 7.1e-100 368.2 288 68.8
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 9.6e-97 357.8 274 73.7
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 1.2e-96 357.5 393 57.3
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.8e-95 353.6 320 60.9
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 3.1e-95 352.8 341 58.9
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 9.0e-95 351.3 284 65.1
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 6.4e-93 345.1 411 51.6
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 4.2e-92 342.4 416 50.5
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.2e-91 340.9 326 60.4
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.3e-89 332.8 208 83.7
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 6.2e-88 328.6 357 56.9
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 2.0e-86 323.6 299 63.2
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 1.1e-84 317.8 224 75.0
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 3.5e-83 312.8 320 60.0
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 3.8e-77 292.7 394 51.3
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 8.4e-77 291.6 263 58.9
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 8.4e-77 291.6 263 58.9
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.9e-76 290.4 177 87.0
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 6.0e-75 285.4 426 48.8
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 9.6e-73 278.1 297 54.5
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.4e-70 269.6 258 56.2
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 2.9e-69 266.5 185 75.1
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 5.3e-63 245.7 265 55.8
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 4.5e-62 242.7 263 51.7
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 5.9e-62 242.3 158 79.7
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.3e-61 241.1 255 52.2
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.9e-53 213.4 133 82.0
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 7.9e-51 205.3 134 81.3
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 7.9e-51 205.3 135 78.5
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 3.8e-45 186.4 114 86.0
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 6.3e-40 169.1 108 76.9
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.1e-36 158.3 253 36.8
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-27 126.7 187 37.4
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 3.6e-27 126.7 90 74.4
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 1.8e-26 124.4 177 41.8
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 4.4e-25 119.8 82 79.3
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 5.6e-12 76.3 41 95.1
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 2.8e-11 73.9 38 94.7
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.0e-09 67.8 243 24.7
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.6e-09 67.4 63 57.1
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 1.7e-08 64.7 36 86.1
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 2.4e-07 60.8 51 58.8


User provided reference genes

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