Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 1.0e-173 614.4 448 100.0
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 3.2e-135 486.5 451 82.9
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 1.5e-132 477.6 435 86.4
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 3.9e-109 399.8 445 76.4
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 1.9e-108 397.5 442 76.0
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 2.4e-103 380.6 445 73.3
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 4.2e-103 379.8 448 73.7
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 4.2e-103 379.8 448 73.7
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 9.3e-103 378.6 443 73.4
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.2e-102 378.3 446 74.7
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.3e-101 374.0 447 71.8
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 4.3e-100 369.8 454 69.8
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 2.1e-99 367.5 451 72.5
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 2.4e-98 364.0 449 72.4
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 6.9e-98 362.5 433 74.4
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 9.0e-98 362.1 441 73.5
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 1.5e-97 361.3 441 71.7
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 2.0e-97 360.9 413 78.2
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 2.6e-97 360.5 439 72.7
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 3.4e-97 360.1 438 73.3
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 3.4e-97 360.1 439 74.0
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 4.5e-97 359.8 431 73.8
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 9.9e-97 358.6 443 71.8
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.7e-96 357.8 450 69.6
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.2e-96 357.5 438 72.8
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 4.9e-96 356.3 443 71.6
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 1.1e-95 355.1 450 70.0
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 3.2e-95 353.6 450 69.1
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 1.2e-94 351.7 405 78.3
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 2.1e-94 350.9 449 69.5
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 3.5e-94 350.1 404 78.0
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 3.5e-94 350.1 452 70.6
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 3.5e-94 350.1 436 73.2
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 4.6e-94 349.7 462 68.4
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 7.9e-94 349.0 443 70.0
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 7.9e-94 349.0 441 70.5
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 3.0e-93 347.1 462 67.7
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 5.1e-93 346.3 443 70.0
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 5.1e-93 346.3 443 70.2
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 8.7e-93 345.5 443 70.4
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.5e-92 344.7 439 69.0
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 4.3e-92 343.2 443 69.8
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 4.3e-92 343.2 443 69.8
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 4.3e-92 343.2 457 70.2
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 4.3e-92 343.2 451 69.0
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 5.6e-92 342.8 443 71.1
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 5.6e-92 342.8 445 70.1
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.3e-91 341.7 443 70.0
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 3.7e-91 340.1 426 73.0
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 8.1e-91 339.0 458 67.7
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 2.4e-90 337.4 429 70.4
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 7.6e-89 332.4 446 68.6
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.7e-88 331.3 433 69.7
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 2.2e-88 330.9 443 70.0
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 3.8e-88 330.1 440 68.0
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 3.8e-88 330.1 457 66.5
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.4e-87 328.2 443 69.5
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 4.2e-87 326.6 459 66.2
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 5.5e-87 326.2 450 67.8
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 1.2e-86 325.1 434 69.1
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 1.6e-86 324.7 446 67.7
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 1.0e-85 322.0 442 67.4
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 2.3e-85 320.9 432 67.8
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 5.1e-85 319.7 453 66.4
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.5e-84 318.2 443 67.3
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 1.9e-84 317.8 452 66.6
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 2.5e-84 317.4 436 68.3
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 2.8e-83 313.9 452 66.8
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 6.9e-82 309.3 526 49.0
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 2.6e-81 307.4 441 66.9
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 5.8e-81 306.2 408 71.6
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 2.9e-80 303.9 422 69.2
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 3.2e-79 300.4 443 66.4
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 7.1e-79 299.3 399 72.4
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 9.3e-79 298.9 404 71.0
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 2.2e-75 287.7 402 70.6
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 2.4e-74 284.3 404 59.9
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 7.7e-73 279.3 411 66.7
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 8.5e-72 275.8 445 62.9
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 1.4e-71 275.0 390 71.0
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 1.9e-71 274.6 410 48.3
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 3.2e-71 273.9 405 68.9
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 4.2e-71 273.5 426 61.5
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 7.2e-71 272.7 400 67.5
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 1.5e-68 265.0 455 46.6
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 7.7e-65 252.7 390 65.4
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 1.1e-60 238.8 185 70.8
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 5.5e-55 219.9 220 54.1
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.4e-50 205.3 222 48.6
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 3.5e-49 200.7 400 62.0
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 4.8e-43 180.3 111 75.7
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 1.8e-42 178.3 111 74.8
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 1.1e-39 169.1 111 72.1
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 8.0e-38 162.9 110 73.6
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 8.0e-38 162.9 99 75.8
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 2.3e-37 161.4 270 78.5
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 2.0e-36 158.3 410 55.6
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 1.7e-35 155.2 132 61.4
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 3.1e-34 151.0 104 69.2
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.7e-28 130.2 129 53.5
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 1.4e-26 125.6 76 72.4
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 4.6e-25 120.6 71 77.5
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 5.0e-24 117.1 70 74.3
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.2e-22 112.5 67 74.6
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 4.0e-21 107.5 143 43.4


User provided reference genes

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