Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 0.0e+00 1177.5 577 100.0
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 2.3e-302 1041.6 583 87.1
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 2.0e-282 975.3 566 82.3
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 2.2e-281 971.8 560 82.3
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 1.9e-280 968.8 554 82.3
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 7.2e-280 966.8 569 80.5
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 2.3e-278 961.8 576 80.9
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 3.0e-278 961.4 562 81.5
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 3.0e-278 961.4 562 81.5
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 1.1e-277 959.5 569 79.8
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 4.4e-277 957.6 570 79.6
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 4.4e-277 957.6 550 82.4
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 5.7e-277 957.2 587 78.5
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 5.7e-277 957.2 579 79.4
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 7.4e-277 956.8 561 80.9
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 9.7e-277 956.4 556 80.8
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 9.7e-277 956.4 550 82.5
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 2.2e-276 955.3 573 79.4
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 3.7e-276 954.5 550 81.8
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 3.7e-276 954.5 557 80.4
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 4.8e-276 954.1 573 81.3
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 6.3e-276 953.7 580 79.0
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 2.4e-275 951.8 581 78.1
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 6.9e-275 950.3 577 79.2
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 9.1e-275 949.9 552 81.2
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 9.1e-275 949.9 590 76.9
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 1.2e-274 949.5 583 78.2
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 3.4e-274 948.0 556 80.2
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 3.4e-274 948.0 581 77.1
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 5.9e-274 947.2 564 80.1
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 5.9e-274 947.2 560 81.1
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 7.7e-274 946.8 583 76.2
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 1.0e-273 946.4 549 81.1
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 1.0e-273 946.4 573 78.0
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 1.7e-273 945.7 587 75.6
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 2.2e-273 945.3 551 80.4
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 2.9e-273 944.9 581 77.3
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 2.9e-273 944.9 583 76.3
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 5.0e-273 944.1 554 79.8
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 1.4e-272 942.6 545 81.7
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 1.9e-272 942.2 578 77.5
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 1.9e-272 942.2 582 76.6
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 4.2e-272 941.0 576 78.1
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 4.2e-272 941.0 557 79.4
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 5.5e-272 940.6 573 77.8
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.6e-271 939.1 573 77.7
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 1.6e-271 939.1 563 78.0
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 2.1e-271 938.7 576 78.3
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.1e-271 938.7 573 77.8
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 2.1e-271 938.7 573 77.7
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 2.1e-271 938.7 571 78.1
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 2.7e-271 938.3 549 79.8
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 2.7e-271 938.3 582 76.5
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 2.7e-271 938.3 581 76.9
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 3.6e-271 937.9 582 77.1
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 4.7e-271 937.6 548 79.0
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 6.1e-271 937.2 579 75.8
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 7.9e-271 936.8 558 79.9
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 1.8e-270 935.6 585 77.3
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 5.2e-270 934.1 592 75.2
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 6.7e-270 933.7 576 75.9
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 8.8e-270 933.3 580 77.4
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 1.5e-269 932.6 563 78.2
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 2.0e-269 932.2 571 77.1
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 2.0e-269 932.2 559 78.0
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 3.3e-269 931.4 563 78.7
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.3e-268 929.5 592 75.0
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 1.3e-268 929.5 579 76.0
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 1.7e-268 929.1 576 75.0
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 1.7e-268 929.1 577 75.9
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 2.8e-268 928.3 577 75.9
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 2.8e-268 928.3 589 75.4
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 3.7e-268 927.9 546 80.0
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 3.7e-268 927.9 552 79.3
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 6.3e-268 927.2 579 74.6
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.3e-268 927.2 593 74.5
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 8.2e-268 926.8 560 78.0
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 1.4e-267 926.0 545 79.1
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 1.4e-267 926.0 546 78.8
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 1.8e-267 925.6 579 74.3
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 3.1e-267 924.9 582 74.9
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 7.0e-267 923.7 577 77.5
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 9.1e-267 923.3 610 73.4
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 1.2e-266 922.9 582 74.9
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.2e-266 922.9 589 75.0
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 1.6e-266 922.5 579 74.3
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 2.6e-266 921.8 580 76.7
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 3.5e-266 921.4 578 74.2
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 5.9e-266 920.6 547 79.2
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 5.9e-266 920.6 560 76.8
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 1.0e-265 919.8 547 78.8
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 1.0e-265 919.8 554 78.7
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 1.7e-265 919.1 589 74.7
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 8.5e-265 916.8 528 81.8
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 3.2e-264 914.8 550 78.2
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 3.0e-262 908.3 548 77.6
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 5.2e-262 907.5 545 77.1
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 6.7e-262 907.1 569 76.1
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 2.8e-260 901.7 526 82.1
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 6.3e-260 900.6 575 75.0
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 1.1e-259 899.8 567 74.8
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 1.1e-259 899.8 548 77.0
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 1.1e-259 899.8 531 79.5
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 4.1e-259 897.9 576 74.7
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 3.5e-258 894.8 572 75.0
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 1.0e-257 893.3 572 74.8
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 9.4e-256 886.7 646 67.6
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 9.4e-256 886.7 566 75.1
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 1.6e-250 869.4 556 72.8
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 5.0e-249 864.4 532 76.5
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 1.9e-248 862.4 574 72.1
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 3.2e-235 818.5 575 70.1
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 8.6e-233 810.4 547 69.3
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 5.6e-232 807.7 560 70.4
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 3.6e-231 805.1 548 69.5
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 1.3e-228 796.6 472 79.0
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 4.9e-228 794.7 518 74.5
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 4.6e-226 788.1 448 83.5
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 4.7e-223 778.1 448 82.1
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 1.3e-220 770.0 549 66.5
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 8.3e-220 767.3 560 68.6
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 5.1e-217 758.1 439 81.1
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 5.6e-208 728.0 517 67.9
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 3.3e-192 675.6 449 71.9
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.3e-185 652.9 469 68.2
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 2.4e-182 642.9 538 58.4
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 1.1e-168 597.4 361 76.7
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 4.5e-157 558.9 344 77.0
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 3.6e-154 549.3 572 52.8
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 9.7e-144 514.6 326 75.8
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 4.1e-142 509.2 561 47.6
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 3.0e-137 493.0 527 52.0
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 9.1e-134 481.5 280 80.0
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 3.5e-133 479.6 417 59.5
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 2.9e-132 476.5 278 80.6
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 6.3e-127 458.8 305 73.1
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 4.9e-111 406.0 573 41.4
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 6.8e-105 385.6 288 64.6
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 3.1e-97 360.1 643 35.6
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 4.0e-89 333.2 263 65.4
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 5.4e-86 322.8 184 81.5
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 2.9e-79 300.4 497 38.4
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 8.4e-79 298.9 591 35.4
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 6.0e-77 292.7 179 76.0
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 1.3e-76 291.6 179 77.1
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.3e-76 290.8 585 34.2
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 8.7e-76 288.9 188 69.1
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 2.7e-69 267.3 167 74.9
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 4.8e-66 256.5 140 85.7
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 1.8e-65 254.6 611 33.1
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 4.9e-63 246.5 321 44.2
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 3.3e-59 233.8 596 29.9
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 2.2e-58 231.1 157 68.8
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 3.7e-50 203.8 117 81.2
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 1.0e-47 195.7 120 79.2
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 1.4e-44 185.3 100 86.0
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 2.4e-41 174.5 106 75.5
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 7.0e-41 172.9 155 58.1
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.1e-37 161.4 108 70.4
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.5e-30 138.7 99 69.7
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 1.4e-28 132.1 67 86.6
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 1.5e-27 128.6 77 74.0
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 9.7e-27 125.9 65 87.7
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 2.0e-24 118.2 90 62.2
Lsat_1_v5_gn_4_11801 Lactuca sativa HOM05D004119 ORTHO05D004797 4.2e-22 110.5 137 45.3
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 4.8e-18 97.1 64 71.9
TAR633G0263 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.6e-11 74.7 54 66.7
TPR.G25082 Trifolium pratense HOM05D004119 ORTHO05D004797 3.4e-11 74.3 78 55.1
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 2.7e-08 64.7 38 71.1
BraA01t00507Z Brassica rapa HOM05D004119 ORTHO05D004797 2.9e-07 61.2 34 70.6
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 1.5e-06 58.9 64 51.6


User provided reference genes

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