Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 1.2e-89 333.2 171 100.0
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 7.0e-82 307.4 160 98.8
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 1.6e-81 306.2 160 98.1
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 7.8e-73 277.3 160 89.4
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 8.6e-72 273.9 172 81.4
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 4.0e-69 265.0 160 83.1
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 6.8e-69 264.2 160 83.1
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 6.8e-69 264.2 159 84.9
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 8.9e-69 263.8 160 84.4
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.5e-68 263.1 160 83.8
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.5e-68 263.1 160 83.8
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 2.6e-68 262.3 159 83.0
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 2.2e-67 259.2 161 82.0
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 4.9e-67 258.1 160 81.9
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.9e-67 258.1 160 81.9
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 6.4e-67 257.7 158 83.5
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 1.4e-66 256.5 159 82.4
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-66 256.1 160 81.2
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 1.6e-65 253.1 160 76.9
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 7.3e-63 244.2 160 78.8
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 4.7e-62 241.5 158 76.6
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 3.1e-61 238.8 160 75.6
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 4.0e-61 238.4 160 74.4
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 6.8e-61 237.7 160 75.0
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 6.8e-61 237.7 160 75.0
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 6.8e-61 237.7 160 75.0
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 6.8e-61 237.7 160 75.0
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 6.8e-61 237.7 160 75.0
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 2.6e-60 235.7 160 74.4
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 2.6e-60 235.7 156 78.2
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 2.6e-60 235.7 156 78.2
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 5.8e-60 234.6 160 76.2
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 9.8e-60 233.8 160 73.8
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 1.7e-59 233.0 160 73.8
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 4.9e-59 231.5 158 74.1
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 1.9e-58 229.6 161 73.3
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 9.2e-58 227.3 160 73.8
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 7.8e-57 224.2 157 72.6
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 3.0e-56 222.2 149 75.2
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 6.6e-56 221.1 158 72.2
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 7.3e-55 217.6 158 69.6
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 3.4e-52 208.8 160 68.1
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 5.8e-52 208.0 134 76.9
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 9.9e-52 207.2 160 65.6
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 1.3e-51 206.8 160 67.5
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.9e-51 205.7 130 77.7
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.7e-51 205.3 126 82.5
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.9e-50 203.0 123 82.1
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 5.4e-50 201.4 120 83.3
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 1.1e-47 193.7 136 72.1
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 8.1e-46 187.6 131 71.8
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 7.6e-44 181.0 144 66.7
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 2.9e-43 179.1 115 80.9
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 1.2e-41 173.7 127 70.1
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 1.6e-41 173.3 89 98.9
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 3.5e-41 172.2 136 64.0
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 4.6e-41 171.8 127 70.1
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 2.3e-40 169.5 149 62.4
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 4.3e-39 165.2 160 57.5
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 7.3e-39 164.5 109 76.1
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 7.3e-39 164.5 153 62.1
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 2.1e-38 162.9 89 95.5
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 1.4e-37 160.2 101 79.2
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 6.4e-35 151.4 106 71.7
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.4e-34 149.4 107 72.9
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 3.5e-33 145.6 77 94.8
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 3.5e-33 145.6 89 80.9
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.7e-32 143.3 85 82.4
Nn010s41442 Nelumbo nucifera HOM05D006976 ORTHO05D008761 8.7e-32 141.0 84 82.1
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 7.3e-31 137.9 89 77.5
Lalb_Chr18g0049641 Lupinus albus HOM05D006976 ORTHO05D008761 1.1e-29 134.0 160 50.6
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 2.4e-29 132.9 86 79.1
HanXRQChr02g0041581 Helianthus annuus HOM05D000806 ORTHO05D002324 2.0e-28 129.8 160 53.8
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 5.8e-28 128.3 76 84.2
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 2.2e-27 126.3 93 68.8
TPR.G11768 Trifolium pratense HOM05D006976 ORTHO05D008761 2.2e-27 126.3 88 71.6
BolSC46t61001H Brassica oleracea HOM05D006976 ORTHO05D008761 3.8e-27 125.6 81 76.5
Migut.G01116 Erythranthe guttata HOM05D006976 ORTHO05D008761 3.8e-27 125.6 81 79.0
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 2.4e-26 122.9 77 77.9
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 5.4e-26 121.7 84 75.0
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.2e-25 120.6 89 73.0
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 1.3e-24 117.1 160 45.0
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 1.5e-23 113.6 89 66.3
arahy.Tifrunner.gnm1.ann1.Z0Q6DR Arachis hypogaea HOM05D006976 ORTHO05D008761 4.3e-23 112.1 71 78.9
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 4.3e-23 112.1 70 77.1
Medtr3g111320 Medicago truncatula HOM05D006976 ORTHO05D008761 1.1e-21 107.5 89 60.7
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 4.0e-21 105.5 63 77.8
TPR.G15439 Trifolium pratense HOM05D006976 ORTHO05D008761 1.0e-19 100.9 73 69.9
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.3e-19 100.5 55 85.5
Gorai.004G088500 Gossypium raimondii HOM05D006976 ORTHO05D008761 5.5e-18 95.1 93 59.1
Glyma.07G028150 Glycine max HOM05D006976 ORTHO05D008761 7.1e-18 94.7 57 80.7
Hund10572 Selenicereus undatus HOM05D006976 ORTHO05D008761 6.0e-17 91.7 75 62.7
Gorai.007G243600 Gossypium raimondii HOM05D000806 ORTHO05D002324 8.7e-16 87.8 51 78.4
QL93p0999_0001 Quercus lobata HOM05D006976 ORTHO05D008761 1.5e-15 87.0 89 57.3
BNapus_Darmor_BZH_scaffold_253p00220 Brassica napus HOM05D000806 ORTHO05D002324 5.7e-15 85.1 56 75.0
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 7.4e-15 84.7 56 67.9
BraSC103t45467Z Brassica rapa HOM05D006976 ORTHO05D008761 1.1e-13 80.9 57 73.7
Lalb_Chr03g0039211 Lupinus albus HOM05D006976 ORTHO05D008761 6.9e-13 78.2 49 77.6
Nitab4.5_0010235g0040 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.5e-12 77.0 54 70.4
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 4.5e-12 75.5 56 66.1
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 4.2e-10 68.9 45 80.0
Migut.D01165 Erythranthe guttata HOM05D006976 ORTHO05D008761 9.3e-10 67.8 39 84.6
MD10G1104000 Malus domestica HOM05D006976 ORTHO05D008761 1.2e-09 67.4 54 63.0
Oeu062852.1 Olea europaea HOM05D006976 ORTHO05D008761 1.3e-08 63.9 35 77.1
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 4.3e-07 58.9 44 63.6
SEGI_11203 Sequoiadendron giganteum HOM05D006976 ORTHO05D008761 1.6e-06 57.0 48 60.4


User provided reference genes

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