Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0345141 Helianthus annuus HOM05D002578 ORTHO05D002698 1.2e-32 142.5 68 100.0
HanXRQChr11g0327011 Helianthus annuus HOM05D002578 ORTHO05D002698 2.9e-31 137.9 68 95.6
HanXRQChr11g0321141 Helianthus annuus HOM05D002578 ORTHO05D002698 7.4e-27 123.2 61 95.1
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-23 112.8 57 93.0
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-23 112.8 57 93.0
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-23 112.8 57 93.0
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-23 112.8 57 93.0
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-23 112.8 57 93.0
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 1.0e-23 112.8 57 93.0
Lsat_1_v5_gn_3_22620 Lactuca sativa HOM05D002578 ORTHO05D005154 8.0e-21 103.2 60 85.0
HanXRQChr00c0593g0576411 Helianthus annuus HOM05D002578 ORTHO05D002698 3.7e-18 94.4 48 91.7
Lj2C1234G17 Lonicera japonica HOM05D002578 ORTHO05D002698 2.4e-17 91.7 73 57.5
DCAR_032525 Daucus carota HOM05D002578 ORTHO05D002698 1.6e-16 89.0 75 64.0
CAN.G114.8 Capsicum annuum HOM05D002578 ORTHO05D002698 2.7e-16 88.2 69 60.9
Lj2P1239T81 Lonicera japonica HOM05D002578 ORTHO05D002698 2.7e-16 88.2 74 54.1
Lju5009P0T59 Lonicera japonica HOM05D002578 ORTHO05D002698 2.7e-16 88.2 74 54.1
Hma1.2p1_0192F.1_g083740 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 1.0e-15 86.3 68 57.4
Hma1.2p1_0247F.1_g101834 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 1.0e-15 86.3 68 57.4
Hma1.2p1_0298F.1_g117736 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 1.0e-15 86.3 68 57.4
Hma1.2p1_0818F.1_g223301 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 1.0e-15 86.3 68 57.4
Lsat_1_v5_gn_5_168080 Lactuca sativa HOM05D002578 ORTHO05D002698 5.0e-15 84.0 49 77.6
HanXRQChr13g0402911 Helianthus annuus HOM05D002578 ORTHO05D002698 8.5e-15 83.2 44 90.9
Oeu060398.1 Olea europaea HOM05D002578 ORTHO05D002698 1.6e-13 79.0 69 59.4
PGR111G0094 Punica granatum HOM05D002578 ORTHO05D002698 3.4e-11 71.2 68 51.5
Peaxi162Scf00299g00118 Petunia axillaris HOM05D002578 ORTHO05D005154 8.3e-10 66.6 58 56.9
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 8.3e-10 66.6 58 58.6
AL2G21760 Arabidopsis lyrata HOM05D002578 ORTHO05D002698 1.4e-09 65.9 72 48.6
BolC7t41707H Brassica oleracea HOM05D002578 ORTHO05D002698 2.4e-09 65.1 72 50.0
AL2G20520 Arabidopsis lyrata HOM05D002578 ORTHO05D002698 7.0e-09 63.5 72 47.2
ATCG00810 Arabidopsis thaliana HOM05D002578 ORTHO05D002698 7.0e-09 63.5 72 47.2
BolSC29t60613H Brassica oleracea HOM05D002578 ORTHO05D002698 7.0e-09 63.5 70 44.3
Nn070s42374 Nelumbo nucifera HOM05D002578 ORTHO05D002698 2.7e-08 61.6 73 46.6
BolSC35t60673H Brassica oleracea HOM05D002578 ORTHO05D002698 3.5e-08 61.2 68 42.6
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 4.5e-08 60.8 58 53.4
Sed0005264 Sechium edule HOM05D002578 ORTHO05D002698 4.5e-08 60.8 75 42.7
Lsat_1_v5_gn_3_113300 Lactuca sativa HOM05D002578 ORTHO05D005154 7.7e-08 60.1 97 42.3
AL1G45060 Arabidopsis lyrata HOM05D002578 ORTHO05D002698 6.6e-07 57.0 69 43.5
Nitab4.5_0000317g0150 Nicotiana tabacum HOM05D002578 ORTHO05D002698 6.6e-07 57.0 48 60.4
SGA_v2.0_scaffold907G53717 Striga asiatica HOM05D002578 ORTHO05D002698 8.6e-07 56.6 58 53.4
Migut.D01326 Erythranthe guttata HOM05D002578 ORTHO05D002698 1.9e-06 55.5 46 56.5
FAN09G4709 Fragaria x ananassa HOM05D002578 ORTHO05D002698 1.9e-06 55.5 38 60.5
HanXRQChr05g0152531 Helianthus annuus HOM05D002578 ORTHO05D002698 1.9e-06 55.5 27 92.6
Eucgr.A01255 Eucalyptus grandis HOM05D002578 ORTHO05D002698 3.3e-06 54.7 62 46.8
RcHm_v2.0_CPg0501841 Rosa chinensis HOM05D002578 ORTHO05D002698 3.3e-06 54.7 41 56.1
PSO548G0035 Papaver somniferum HOM05D002578 ORTHO05D002698 5.5e-06 53.9 60 46.7
Hma1.2p1_0104F.1_g050125 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 9.5e-06 53.1 31 71.0


User provided reference genes

Program Settings