Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0344741 Helianthus annuus HOM05D001283 ORTHO05D001109 1.2e-71 273.5 176 100.0
HanXRQChr01g0021651 Helianthus annuus HOM05D001283 ORTHO05D001109 1.9e-18 96.7 152 61.2
DCAR_023815 Daucus carota HOM05D001283 ORTHO05D001109 2.0e-15 86.7 143 58.0
Cc01_g02150 Coffea canephora HOM05D001283 ORTHO05D001109 3.4e-15 85.9 94 61.7
Oeu033919.1 Olea europaea HOM05D001283 ORTHO05D001109 9.9e-15 84.3 91 64.8
Lsat_1_v5_gn_6_54241 Lactuca sativa HOM05D001283 ORTHO05D001109 1.3e-14 84.0 97 56.7
MSTRG.20944 Avicennia marina HOM05D001283 ORTHO05D001109 6.4e-14 81.6 90 64.4
Oeu058888.2 Olea europaea HOM05D001283 ORTHO05D001109 2.4e-13 79.7 75 68.0
Haze_22963 Corylus avellana HOM05D000020 ORTHO05D000904 1.2e-12 77.4 95 57.9
Dinv13450 Davidia involucrata HOM05D001283 ORTHO05D001109 2.7e-12 76.3 96 59.4
HanXRQChr10g0315341 Helianthus annuus HOM05D001283 ORTHO05D001109 1.3e-11 73.9 63 66.7
AT3G13570 Arabidopsis thaliana HOM05D001283 ORTHO05D001109 3.0e-11 72.8 98 57.1
arahy.Tifrunner.gnm1.ann1.F6WF27 Arachis hypogaea HOM05D001283 ORTHO05D001109 3.9e-11 72.4 98 57.1
arahy.Tifrunner.gnm1.ann1.HMW6IE Arachis hypogaea HOM05D001283 ORTHO05D001109 3.9e-11 72.4 98 57.1
CiPaw.14G135100 Carya illinoinensis HOM05D001283 ORTHO05D001109 5.1e-11 72.0 105 49.5
Solyc01g005820.4 Solanum lycopersicum HOM05D001283 ORTHO05D001109 6.7e-11 71.6 85 60.0
Sopen01g001820 Solanum pennellii HOM05D001283 ORTHO05D001109 6.7e-11 71.6 85 60.0
CANSAT11G2380 Cannabis sativa HOM05D001283 ORTHO05D001109 1.5e-10 70.5 82 62.2
Thhalv10021351m.g Eutrema salsugineum HOM05D001283 ORTHO05D001109 1.5e-10 70.5 91 57.1
Carub.0003s1305 Capsella rubella HOM05D001283 ORTHO05D001109 1.9e-10 70.1 91 58.2
Glyma.14G188200 Glycine max HOM05D001283 ORTHO05D001109 3.3e-10 69.3 101 55.4
Sp1g40970 Schrenkiella parvula HOM05D001283 ORTHO05D001109 4.3e-10 68.9 94 52.1
BcaC08g44189 Brassica carinata HOM05D001283 ORTHO05D001109 9.6e-10 67.8 92 55.4
BolC6t36788H Brassica oleracea HOM05D001283 ORTHO05D001109 9.6e-10 67.8 92 55.4
Glyma.02G220800 Glycine max HOM05D001283 ORTHO05D001109 1.3e-09 67.4 104 53.8
Actinidia39355 Actinidia chinensis HOM05D001283 ORTHO05D001109 1.6e-09 67.0 113 51.3
AL3G25480 Arabidopsis lyrata HOM05D001283 ORTHO05D001109 1.6e-09 67.0 91 57.1
C06p15960 Brassica napus HOM05D001283 ORTHO05D001109 2.8e-09 66.2 92 54.3
Lj1C542G3 Lonicera japonica HOM05D001283 ORTHO05D001109 3.7e-09 65.9 80 62.5
Nitab4.5_0000827g0060 Nicotiana tabacum HOM05D000764 ORTHO05D002006 8.1e-09 64.7 100 53.0
GSVIVG01025432001 Vitis vinifera HOM05D001283 ORTHO05D001109 8.1e-09 64.7 93 57.0
Migut.D02546 Erythranthe guttata HOM05D001283 ORTHO05D001109 2.4e-08 63.2 143 57.3
Nitab4.5_0001730g0110 Nicotiana tabacum HOM05D001283 ORTHO05D001109 3.1e-08 62.8 70 65.7
Sp3g11780 Schrenkiella parvula HOM05D001283 ORTHO05D001109 3.1e-08 62.8 69 60.9
Duzib168G0268 Durio zibethinus HOM05D001283 ORTHO05D001109 5.3e-08 62.0 85 52.9
TWI32G1002 Tripterygium wilfordii HOM05D001283 ORTHO05D001109 6.9e-08 61.6 86 57.0
Gohir.D06G111000 Gossypium hirsutum HOM05D001283 ORTHO05D001109 1.2e-07 60.8 92 54.3
Gorai.010G126300 Gossypium raimondii HOM05D001283 ORTHO05D001109 1.2e-07 60.8 92 54.3
Lsat_1_v5_gn_2_53461 Lactuca sativa HOM05D001283 ORTHO05D001109 2.0e-07 60.1 89 53.9
TAR633G1703 Trochodendron aralioides HOM05D001283 ORTHO05D001109 2.0e-07 60.1 85 56.5
Gohir.A06G103300 Gossypium hirsutum HOM05D001283 ORTHO05D001109 2.6e-07 59.7 92 53.3
CARHR044960 Cardamine hirsuta HOM05D001283 ORTHO05D001109 3.4e-07 59.3 63 61.9
ClCG03G012340 Citrullus lanatus HOM05D001283 ORTHO05D001109 3.4e-07 59.3 110 48.2
A06p00270 Brassica napus HOM05D001283 ORTHO05D001109 4.5e-07 58.9 84 57.1
BraA06t23244Z Brassica rapa HOM05D001283 ORTHO05D001109 4.5e-07 58.9 84 57.1
THA.LOC104822676 Tarenaya hassleriana HOM05D001283 ORTHO05D001109 9.9e-07 57.8 91 51.6
Atru.chr3.2360 Acer truncatum HOM05D001283 ORTHO05D001109 2.2e-06 56.6 94 51.1
ECA248G3711 Erigeron canadensis HOM05D001283 ORTHO05D001109 2.2e-06 56.6 147 51.7
Lalb_Chr08g0230311 Lupinus albus HOM05D001283 ORTHO05D001109 2.2e-06 56.6 57 64.9
Potri.001G006400 Populus trichocarpa HOM05D001283 ORTHO05D001109 2.2e-06 56.6 77 55.8
PGSC0003DMG400004273 Solanum tuberosum HOM05D001283 ORTHO05D001109 2.2e-06 56.6 89 51.7
Aa31LG10G1070 Aethionema arabicum HOM05D001283 ORTHO05D001109 3.8e-06 55.8 82 53.7
Ciclev10016371m.g Citrus clementina HOM05D001283 ORTHO05D001109 3.8e-06 55.8 98 50.0
GSVIVG01001344001 Vitis vinifera HOM05D001283 ORTHO05D001109 3.8e-06 55.8 67 62.7
PGSC0003DMG400032132 Solanum tuberosum HOM05D001283 ORTHO05D001109 4.9e-06 55.5 86 51.2
Eucgr.J01817 Eucalyptus grandis HOM05D001283 ORTHO05D001109 6.4e-06 55.1 87 55.2
C06p10260 Brassica napus HOM05D001283 ORTHO05D001109 8.4e-06 54.7 89 52.8
BolC6t36101H Brassica oleracea HOM05D001283 ORTHO05D001109 8.4e-06 54.7 89 52.8


User provided reference genes

Program Settings