Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 2.0e-141 505.8 249 100.0
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 4.7e-119 431.4 239 89.1
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.5e-104 382.5 234 79.9
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 1.2e-103 380.2 239 77.8
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 6.1e-103 377.9 240 81.7
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 4.0e-102 375.2 238 76.9
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 2.0e-101 372.9 234 78.6
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 3.4e-101 372.1 237 77.2
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 2.9e-100 369.0 234 77.8
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 4.9e-100 368.2 234 76.9
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 6.4e-100 367.9 241 76.3
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 8.3e-100 367.5 237 76.8
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 2.4e-99 365.9 231 77.5
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 3.2e-99 365.5 234 78.2
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 4.1e-99 365.2 237 76.4
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 5.4e-99 364.8 230 77.8
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 5.4e-99 364.8 237 75.9
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 9.2e-99 364.0 231 77.1
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 9.2e-99 364.0 250 72.8
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 2.0e-98 362.8 238 73.9
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.7e-98 362.5 234 75.6
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.7e-98 362.5 240 75.8
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 7.8e-98 360.9 236 74.2
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.3e-97 360.1 241 72.6
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.7e-97 359.8 228 77.2
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.7e-97 359.8 237 74.3
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.7e-97 359.8 229 76.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 3.0e-97 359.0 230 77.0
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.0e-97 359.0 255 69.8
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 6.6e-97 357.8 231 75.8
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 6.6e-97 357.8 228 76.3
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.1e-96 357.1 228 75.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 1.1e-96 357.1 228 75.9
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.5e-96 356.7 245 73.1
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.5e-96 355.9 240 73.8
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.5e-96 355.9 240 73.8
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.5e-96 355.9 237 74.3
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 5.6e-96 354.8 237 73.8
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.6e-96 354.8 237 73.8
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 7.3e-96 354.4 254 70.9
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 9.5e-96 354.0 231 72.7
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 9.5e-96 354.0 231 76.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.2e-95 353.6 243 71.6
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.1e-95 352.8 237 73.8
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 2.8e-95 352.4 237 74.3
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 2.8e-95 352.4 228 75.4
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 3.6e-95 352.1 240 71.2
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 4.7e-95 351.7 252 70.2
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 6.2e-95 351.3 238 73.9
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 8.0e-95 350.9 232 74.1
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.0e-95 350.9 249 70.3
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.1e-94 350.5 246 71.1
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.4e-94 350.1 246 72.4
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 1.8e-94 349.7 236 72.9
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.8e-94 349.7 261 68.2
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.3e-94 349.4 236 73.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 4.0e-94 348.6 228 75.4
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 4.0e-94 348.6 232 75.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 5.2e-94 348.2 253 68.8
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 6.8e-94 347.8 238 72.7
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 6.8e-94 347.8 232 73.7
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.5e-93 346.7 252 67.9
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 2.6e-93 345.9 251 68.5
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 5.8e-93 344.7 257 68.1
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 5.8e-93 344.7 222 77.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 9.8e-93 344.0 239 71.5
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.7e-92 343.2 238 71.0
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.2e-92 342.8 261 66.7
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 3.7e-92 342.0 239 71.1
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 4.9e-92 341.7 242 70.2
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 4.9e-92 341.7 243 71.6
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 2.4e-91 339.3 242 71.5
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 2.4e-91 339.3 233 70.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 3.2e-91 339.0 242 70.7
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 3.2e-91 339.0 244 68.9
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 5.4e-91 338.2 239 71.5
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 9.2e-91 337.4 239 71.5
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.2e-90 337.0 208 79.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 1.2e-90 337.0 306 58.8
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.6e-90 336.7 211 78.7
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-90 336.3 245 69.0
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 2.0e-90 336.3 245 69.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 6.0e-90 334.7 241 70.5
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.0e-89 334.0 212 79.2
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.0e-89 332.4 235 71.1
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 3.9e-89 332.0 228 69.3
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 5.0e-89 331.6 220 73.2
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 8.6e-89 330.9 242 69.4
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 3.3e-88 328.9 248 66.9
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.8e-87 325.9 234 67.5
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 1.4e-86 323.6 208 76.9
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.3e-86 322.8 213 74.2
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.2e-85 320.5 304 56.9
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 2.6e-85 319.3 230 68.7
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 9.9e-85 317.4 211 73.9
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 8.3e-84 314.3 235 67.7
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 3.2e-83 312.4 208 74.0
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 6.6e-81 304.7 201 74.6
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 3.3e-80 302.4 199 75.9
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.6e-79 300.1 220 68.2
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 1.5e-72 276.9 198 68.2
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 1.3e-68 263.8 223 61.4
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 6.4e-68 261.5 168 79.2
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 4.2e-67 258.8 305 50.5
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 4.5e-61 238.8 173 69.9
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 7.6e-61 238.0 232 50.9
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.7e-60 236.9 243 49.0
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.1e-56 224.2 144 72.2
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 3.7e-55 219.2 225 50.2
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 2.7e-50 203.0 229 48.9
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.4e-46 190.7 137 67.9
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 2.4e-46 189.9 133 73.7
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.2e-42 177.6 160 60.0
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.6e-42 177.2 157 61.1
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 7.9e-42 174.9 157 60.5
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.0e-41 172.9 95 81.1
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 2.2e-36 156.8 114 72.8
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.9e-36 156.4 175 51.4
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 4.6e-34 149.1 96 76.0
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 6.3e-31 138.7 123 61.0
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 8.2e-31 138.3 95 69.5
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.2e-29 134.4 94 71.3
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 3.0e-25 119.8 76 71.1
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.4e-22 110.9 104 56.7
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 6.7e-17 92.0 179 32.4
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 4.8e-15 85.9 47 78.7
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-10 70.9 114 42.1
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.4e-09 67.8 114 41.2


User provided reference genes

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