Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 2.9e-179 631.7 304 100.0
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 2.0e-172 609.0 302 97.7
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.4e-146 523.1 302 82.5
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 4.2e-138 495.0 302 80.5
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 1.8e-136 489.6 301 75.7
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 6.7e-136 487.6 301 77.4
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 6.7e-136 487.6 301 75.4
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 1.1e-135 486.9 301 77.7
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 2.0e-135 486.1 301 75.1
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 2.4e-133 479.2 301 75.4
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 5.3e-133 478.0 301 75.1
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 1.2e-132 476.9 301 74.8
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 1.5e-132 476.5 301 75.7
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 2.0e-132 476.1 301 74.8
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 2.0e-132 476.1 301 74.1
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 4.5e-132 474.9 301 75.1
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 4.5e-132 474.9 301 75.1
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 1.0e-131 473.8 301 74.1
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 1.7e-131 473.0 301 74.1
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 3.2e-130 468.8 299 74.6
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 5.5e-130 468.0 301 73.8
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 7.2e-130 467.6 302 73.5
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 1.2e-129 466.8 294 74.8
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.6e-129 466.5 301 74.4
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 2.7e-129 465.7 301 73.1
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 6.1e-129 464.5 301 74.4
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 6.1e-129 464.5 313 70.6
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 8.0e-129 464.2 293 75.8
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 1.0e-128 463.8 296 74.7
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.8e-128 463.0 301 74.4
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 1.8e-128 463.0 299 73.2
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 3.0e-128 462.2 300 73.0
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 8.8e-128 460.7 295 74.2
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 1.5e-127 459.9 306 72.2
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 2.0e-127 459.5 297 74.4
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 2.0e-127 459.5 301 72.4
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.3e-127 458.8 301 72.4
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 3.3e-127 458.8 305 72.5
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 3.3e-127 458.8 301 72.8
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 3.3e-127 458.8 301 72.4
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 7.4e-127 457.6 301 72.1
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 1.7e-126 456.4 301 73.1
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 8.2e-126 454.1 302 72.2
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 1.4e-125 453.4 295 73.6
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 3.1e-125 452.2 301 71.8
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 7.0e-125 451.1 330 67.0
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 9.1e-125 450.7 302 72.2
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 2.0e-124 449.5 301 72.8
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 3.5e-124 448.7 301 71.8
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 3.5e-124 448.7 302 72.2
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 5.9e-124 448.0 294 72.1
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 1.3e-123 446.8 302 71.9
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 3.2e-122 442.2 323 67.8
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 5.5e-122 441.4 301 70.8
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 2.7e-121 439.1 311 69.8
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 3.6e-121 438.7 301 69.1
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 4.7e-121 438.3 297 72.1
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 6.1e-121 438.0 297 72.1
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 8.0e-121 437.6 301 69.4
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.8e-120 436.4 301 70.1
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 2.3e-120 436.0 301 69.8
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 4.0e-120 435.3 298 69.8
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 5.2e-120 434.9 298 67.8
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 2.0e-119 433.0 297 70.0
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 9.7e-119 430.6 298 68.8
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.7e-118 429.9 298 67.1
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.7e-118 429.9 298 67.1
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 2.2e-118 429.5 302 69.2
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.2e-118 429.5 301 70.4
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 4.8e-118 428.3 298 70.1
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 4.8e-118 428.3 298 70.1
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 4.8e-118 428.3 298 70.1
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.8e-117 426.4 297 68.0
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 1.8e-117 426.4 301 68.1
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 1.6e-116 423.3 298 69.5
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 2.0e-116 422.9 297 67.3
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 2.7e-116 422.5 298 69.8
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 7.7e-116 421.0 302 66.6
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 3.8e-115 418.7 299 69.2
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 1.5e-114 416.8 301 68.1
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 7.2e-114 414.5 302 67.9
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 9.4e-114 414.1 301 66.8
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 8.3e-110 401.0 255 74.9
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 4.1e-109 398.7 257 74.7
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 1.2e-105 387.1 301 65.1
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.0e-104 382.5 316 62.3
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.8e-102 375.9 301 58.1
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 2.4e-101 372.9 297 57.2
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 1.6e-100 370.2 298 57.4
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.7e-100 369.4 297 58.2
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 1.7e-99 366.7 237 73.8
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 5.0e-99 365.2 299 56.5
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.1e-96 355.9 246 71.5
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 8.3e-94 347.8 298 59.7
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 9.5e-90 334.3 299 57.5
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 3.1e-88 329.3 336 54.5
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.5e-82 310.5 305 55.4
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 3.4e-79 299.3 301 54.2
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 2.1e-73 280.0 302 50.7
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.5e-71 273.9 320 48.8
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 9.3e-61 238.0 313 43.8
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 5.3e-56 222.2 422 29.1
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 9.0e-56 221.5 221 52.5
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 2.1e-52 210.3 344 36.0
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 4.6e-52 209.1 217 50.2
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 9.0e-48 194.9 325 35.4
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.5e-47 194.1 168 58.9
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.6e-44 182.6 104 80.8
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 8.5e-30 135.2 85 71.8
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 8.0e-12 75.5 48 75.0
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 1.4e-08 64.7 31 83.9
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 1.4e-08 64.7 31 83.9
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 1.4e-08 64.7 31 83.9
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 1.4e-08 64.7 31 83.9
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 4.1e-08 63.2 31 80.6


User provided reference genes

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