Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 2.0e-250 868.6 433 100.0
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 3.0e-206 721.8 404 86.4
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 2.2e-204 715.7 417 84.2
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 2.1e-167 592.8 403 70.2
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.7e-164 583.2 418 68.4
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 4.1e-163 578.6 404 69.1
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 3.5e-162 575.5 402 70.1
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 9.5e-160 567.4 403 68.5
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 8.0e-159 564.3 431 65.2
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 2.3e-158 562.8 420 65.7
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 4.0e-158 562.0 429 66.9
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 4.0e-158 562.0 408 67.4
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 5.2e-158 561.6 406 67.2
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.5e-157 560.1 413 67.3
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 2.6e-157 559.3 405 67.2
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 2.6e-157 559.3 410 66.1
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 3.4e-157 558.9 403 67.5
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 5.8e-157 558.1 367 72.8
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 5.8e-157 558.1 412 66.5
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 7.5e-157 557.8 407 66.6
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 7.5e-157 557.8 410 66.3
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 9.8e-157 557.4 436 65.8
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 1.3e-156 557.0 426 64.8
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 2.2e-156 556.2 406 68.2
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 2.2e-156 556.2 408 66.4
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 2.2e-156 556.2 434 65.4
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 3.7e-156 555.4 403 67.2
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 3.7e-156 555.4 404 67.8
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 8.3e-156 554.3 403 67.7
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 1.1e-155 553.9 403 68.0
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.4e-155 553.5 429 64.8
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.9e-155 553.1 423 65.5
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 2.4e-155 552.7 405 67.4
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 7.0e-155 551.2 403 66.7
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 9.2e-155 550.8 403 66.3
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 9.2e-155 550.8 407 65.1
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 1.2e-154 550.4 412 65.8
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.6e-154 550.1 430 64.4
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.6e-154 550.1 403 67.2
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.1e-154 549.7 424 64.6
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.1e-154 549.7 402 67.9
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 2.1e-154 549.7 409 65.8
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 3.5e-154 548.9 408 65.7
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 3.5e-154 548.9 406 66.5
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 4.6e-154 548.5 409 66.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 7.8e-154 547.7 402 67.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.8e-154 547.7 402 67.7
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 7.8e-154 547.7 404 66.8
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.0e-153 547.4 421 65.8
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 1.3e-153 547.0 410 67.3
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.3e-153 547.0 402 67.7
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 4.3e-152 542.0 433 62.4
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 4.3e-152 542.0 408 65.4
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 5.6e-152 541.6 413 63.4
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 7.3e-152 541.2 422 64.9
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 9.5e-152 540.8 403 66.5
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 9.5e-152 540.8 403 66.5
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.6e-151 540.0 461 59.0
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 6.2e-151 538.1 435 63.7
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 8.1e-151 537.7 406 64.8
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.4e-150 537.0 419 63.2
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.8e-150 536.6 400 65.5
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 2.3e-150 536.2 405 65.7
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.3e-150 536.2 402 65.4
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 3.1e-150 535.8 403 64.3
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 3.1e-150 535.8 424 62.5
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 8.9e-150 534.3 434 63.4
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 5.8e-149 531.6 419 62.1
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.2e-146 523.9 404 63.6
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 3.5e-146 522.3 404 62.9
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 6.0e-146 521.5 432 60.2
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 7.8e-146 521.2 402 62.9
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 3.0e-145 519.2 409 64.1
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 3.9e-145 518.8 419 60.6
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 8.6e-145 517.7 421 61.3
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.1e-144 517.3 443 59.8
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 2.5e-144 516.2 408 61.3
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 1.6e-143 513.5 410 62.4
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 8.1e-143 511.1 404 61.1
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.1e-142 510.8 403 61.0
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 3.1e-142 509.2 401 61.1
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 8.9e-142 507.7 436 58.0
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.5e-141 506.9 403 61.5
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 3.4e-141 505.8 398 61.3
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 7.6e-141 504.6 400 61.2
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 9.9e-141 504.2 398 61.1
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 3.8e-140 502.3 403 60.5
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 3.0e-137 492.7 352 66.2
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 6.9e-134 481.5 341 67.4
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 1.2e-133 480.7 373 63.3
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 7.6e-133 478.0 486 52.1
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 9.9e-133 477.6 344 66.9
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 3.8e-132 475.7 325 69.2
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.9e-131 473.4 314 71.3
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.6e-130 470.3 314 72.9
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 4.3e-128 462.2 421 57.0
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 4.0e-126 455.7 314 69.4
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.5e-120 437.2 422 52.1
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 9.3e-115 417.9 316 63.3
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 6.7e-113 411.8 283 72.1
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 8.2e-111 404.8 290 65.5
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 5.8e-109 398.7 354 54.2
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.6e-109 398.3 282 67.0
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 2.8e-103 379.8 279 66.3
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 1.1e-99 367.9 367 51.0
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 3.9e-97 359.4 418 45.2
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 6.7e-97 358.6 403 49.9
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.1e-96 357.8 294 57.5
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 7.9e-90 335.1 239 66.9
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 7.9e-90 335.1 306 54.2
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 8.8e-89 331.6 323 55.4
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 2.1e-82 310.5 287 53.7
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 3.6e-82 309.7 286 55.6
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 1.4e-81 307.8 218 71.1
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 4.2e-75 286.2 325 47.7
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.4e-73 281.2 269 52.0
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.8e-73 280.8 158 84.2
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 2.7e-69 266.9 264 50.4
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 4.4e-64 249.6 169 66.9
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.1e-54 218.4 163 65.6
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 5.4e-54 216.1 242 45.9
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.8e-48 196.1 144 67.4
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 1.4e-38 164.9 119 73.1
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.2e-38 163.7 282 34.0
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 5.6e-27 126.3 192 45.3
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 9.6e-27 125.6 110 51.8
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 9.6e-27 125.6 116 50.9
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 1.3e-20 105.1 214 36.4
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.3e-19 100.1 61 78.7
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 5.6e-11 73.2 57 59.6


User provided reference genes

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