Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0338071 Helianthus annuus HOM05D002925 ORTHO05D003247 2.0e-214 748.8 381 100.0
Lsat_1_v5_gn_7_82001 Lactuca sativa HOM05D002925 ORTHO05D003247 2.1e-86 323.6 386 48.4
ECA236G2475 Erigeron canadensis HOM05D002925 ORTHO05D003247 4.4e-44 183.0 188 53.7
HanXRQChr16g0514751 Helianthus annuus HOM05D002925 ORTHO05D003247 1.0e-40 171.8 343 32.4
Lsat_1_v5_gn_5_108081 Lactuca sativa HOM05D002925 ORTHO05D003247 1.7e-35 154.5 322 34.2
Nitab4.5_0000863g0180 Nicotiana tabacum HOM05D002925 ORTHO05D003247 9.0e-29 132.1 242 36.4
ECA234G1059 Erigeron canadensis HOM05D002925 ORTHO05D003247 1.2e-28 131.7 306 30.7
Nitab4.5_0001619g0030 Nicotiana tabacum HOM05D002925 ORTHO05D003247 2.6e-28 130.6 242 36.0
SalBow5G0297 Salvia bowleyana HOM05D002925 ORTHO05D003247 3.4e-28 130.2 237 36.3
SalBow5G2582 Salvia bowleyana HOM05D002925 ORTHO05D003247 3.4e-28 130.2 237 36.3
GSVIVG01015726001 Vitis vinifera HOM05D002925 ORTHO05D003247 1.7e-27 127.9 224 34.4
Thecc.02G136300 Theobroma cacao HOM05D002925 ORTHO05D003247 2.9e-27 127.1 225 36.4
Cfa005642 Carpinus fangiana HOM05D002925 ORTHO05D003247 3.8e-27 126.7 227 36.6
COL.COLO4_29615 Corchorus olitorius HOM05D002925 ORTHO05D003247 8.4e-27 125.6 224 35.7
Gohir.A03G174900 Gossypium hirsutum HOM05D002925 ORTHO05D003247 1.1e-26 125.2 228 35.1
Lalb_Chr15g0090391 Lupinus albus HOM05D002925 ORTHO05D003247 4.2e-26 123.2 247 34.4
QL11p021491 Quercus lobata HOM05D002925 ORTHO05D003247 4.2e-26 123.2 233 35.2
MSTRG.20293 Avicennia marina HOM05D002925 ORTHO05D003247 5.4e-26 122.9 229 32.8
CSS0049612 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 5.4e-26 122.9 236 34.7
CiPaw.06G154400 Carya illinoinensis HOM05D002925 ORTHO05D003247 7.1e-26 122.5 224 34.8
Solyc01g105330.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 7.1e-26 122.5 245 33.9
Actinidia24000 Actinidia chinensis HOM05D002925 ORTHO05D003247 9.3e-26 122.1 227 34.4
Migut.B00599 Erythranthe guttata HOM05D002925 ORTHO05D003247 9.3e-26 122.1 200 34.0
Gorai.005G221500 Gossypium raimondii HOM05D002925 ORTHO05D003247 1.6e-25 121.3 227 33.5
Gohir.D02G198200 Gossypium hirsutum HOM05D002925 ORTHO05D003247 2.1e-25 120.9 227 33.5
Sabra16G0197500 Salix brachista HOM05D002925 ORTHO05D003247 2.1e-25 120.9 222 35.1
Potri.001G312900 Populus trichocarpa HOM05D002925 ORTHO05D003247 3.5e-25 120.2 219 35.2
SGA_v2.0_scaffold14G07129 Striga asiatica HOM05D002925 ORTHO05D003247 3.5e-25 120.2 231 33.8
Dinv24181 Davidia involucrata HOM05D002925 ORTHO05D003247 4.6e-25 119.8 223 33.6
Oeu036916.1 Olea europaea HOM05D002925 ORTHO05D003247 4.6e-25 119.8 225 35.1
Psat1g216280 Pisum sativum HOM05D002925 ORTHO05D003247 4.6e-25 119.8 227 33.0
Lalb_Chr18g0060531 Lupinus albus HOM05D002925 ORTHO05D003247 6.0e-25 119.4 245 31.8
SGA_v2.0_scaffold83G26306 Striga asiatica HOM05D002925 ORTHO05D003247 6.0e-25 119.4 229 33.2
Dinv09022 Davidia involucrata HOM05D002925 ORTHO05D003247 7.9e-25 119.0 237 32.5
arahy.Tifrunner.gnm1.ann1.VGLF4N Arachis hypogaea HOM05D002925 ORTHO05D003247 1.0e-24 118.6 232 31.9
Ciclev10027826m.g Citrus clementina HOM05D002925 ORTHO05D003247 1.0e-24 118.6 214 33.6
Eucgr.I02657 Eucalyptus grandis HOM05D002925 ORTHO05D003247 1.0e-24 118.6 234 32.9
Manes.07G032600 Manihot esculenta HOM05D002925 ORTHO05D003247 1.0e-24 118.6 228 32.5
Sopen01g047830 Solanum pennellii HOM05D002925 ORTHO05D003247 1.0e-24 118.6 245 33.5
DCAR_021864 Daucus carota HOM05D002925 ORTHO05D003247 1.3e-24 118.2 228 36.4
PGSC0003DMG400012552 Solanum tuberosum HOM05D002925 ORTHO05D003247 2.3e-24 117.5 238 31.9
Ca_00141_v3 Cicer arietinum L. HOM05D002925 ORTHO05D003247 3.0e-24 117.1 238 31.5
Peaxi162Scf00001g00002 Petunia axillaris HOM05D002925 ORTHO05D003247 5.1e-24 116.3 234 35.0
CAN.G523.55 Capsicum annuum HOM05D002925 ORTHO05D003247 6.7e-24 115.9 238 34.9
RcHm_v2.0_Chr6g0271751 Rosa chinensis HOM05D002925 ORTHO05D003247 6.7e-24 115.9 237 32.1
AUR62013144 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.1e-23 115.2 233 33.9
Cc02_g21380 Coffea canephora HOM05D002925 ORTHO05D003247 1.1e-23 115.2 230 33.0
FAN20G1033 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.1e-23 115.2 237 32.5
Prupe.8G062800 Prunus persica HOM05D002925 ORTHO05D003247 1.5e-23 114.8 225 32.0
Hma1.2p1_0522F.1_g171730 Hydrangea macrophylla HOM05D002925 ORTHO05D003247 1.9e-23 114.4 245 31.4
Phvul.006G205800 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 1.9e-23 114.4 228 32.9
MD10G1050700 Malus domestica HOM05D002925 ORTHO05D003247 4.3e-23 113.2 239 31.4
unitig_22.g6065 Utricularia gibba HOM05D002925 ORTHO05D003247 4.3e-23 113.2 220 31.8
AUR62010148 Chenopodium quinoa HOM05D002925 ORTHO05D003247 5.6e-23 112.8 234 32.1
Atru.chr6.1160 Acer truncatum HOM05D002925 ORTHO05D003247 7.4e-23 112.5 222 33.8
MD05G1043400 Malus domestica HOM05D002925 ORTHO05D003247 9.6e-23 112.1 240 32.1
FAN15G3696 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.3e-22 111.7 237 31.6
Glyma.15G054200 Glycine max HOM05D002925 ORTHO05D003247 1.3e-22 111.7 238 30.3
FvH4_2g11920 Fragaria vesca HOM05D002925 ORTHO05D003247 1.6e-22 111.3 230 32.2
Ah.01g022240 Amaranthus hybridus HOM05D002925 ORTHO05D003247 2.1e-22 110.9 224 31.7
FAN24G2963 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.1e-22 110.9 230 32.2
Aqoxy6G00762 Aquilegia oxysepala HOM05D002925 ORTHO05D003247 3.7e-22 110.2 220 32.3
GSVIVG01009040001 Vitis vinifera HOM05D002925 ORTHO05D003247 3.7e-22 110.2 241 30.3
Medtr2g009040 Medicago truncatula HOM05D002925 ORTHO05D003247 6.2e-22 109.4 239 30.5
Nn1g05384 Nelumbo nucifera HOM05D002925 ORTHO05D003247 6.2e-22 109.4 222 30.2
Lj6g0016748 Lotus japonicus HOM05D002925 ORTHO05D003247 8.1e-22 109.0 238 29.8
THA.LOC104807164 Tarenaya hassleriana HOM05D002925 ORTHO05D003247 1.1e-21 108.6 217 32.3
CiPaw.07G178900 Carya illinoinensis HOM05D002925 ORTHO05D003247 3.1e-21 107.1 234 30.3
arahy.Tifrunner.gnm1.ann1.M5A3LZ Arachis hypogaea HOM05D002925 ORTHO05D003247 4.0e-21 106.7 252 29.4
Sc23g0000240 Simmondsia chinensis HOM05D002925 ORTHO05D003247 5.3e-21 106.3 235 30.2
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 1.2e-20 105.1 222 30.2
Glyma.08G178400 Glycine max HOM05D002925 ORTHO05D003247 2.0e-20 104.4 224 33.0
TWI59G1115 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 2.6e-20 104.0 220 33.6
MBI02_g36599_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 4.5e-20 103.2 230 29.6
TAR625G1540 Trochodendron aralioides HOM05D002925 ORTHO05D003247 4.5e-20 103.2 237 30.4
Cfa013644 Carpinus fangiana HOM05D002925 ORTHO05D003247 5.8e-20 102.8 232 31.5
Sc18g0006800 Simmondsia chinensis HOM05D002925 ORTHO05D003247 7.6e-20 102.4 220 32.3
Glyma.04G101200 Glycine max HOM05D002925 ORTHO05D003247 2.2e-19 100.9 274 29.9
Hund26967 Selenicereus undatus HOM05D002925 ORTHO05D003247 2.9e-19 100.5 235 29.8
Peaxi162Scf00392g00416 Petunia axillaris HOM05D002925 ORTHO05D003247 4.9e-19 99.8 227 26.4
Migut.C00133 Erythranthe guttata HOM05D002925 ORTHO05D003247 8.4e-19 99.0 233 28.3
Nitab4.5_0000232g0050 Nicotiana tabacum HOM05D002925 ORTHO05D003247 8.4e-19 99.0 225 26.7
PGSC0003DMG400006417 Solanum tuberosum HOM05D002925 ORTHO05D003247 1.4e-18 98.2 229 28.8
Glyma.06G102900 Glycine max HOM05D002925 ORTHO05D003247 1.9e-18 97.8 156 37.8
CDE10G0684 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 3.2e-18 97.1 215 28.4
MD00G1009700 Malus domestica HOM05D002925 ORTHO05D003247 5.5e-18 96.3 117 41.9
VMungo0540G1175 Vigna mungo HOM05D002925 ORTHO05D003247 5.5e-18 96.3 266 27.8
Oeu029761.1 Olea europaea HOM05D002925 ORTHO05D003247 7.1e-18 95.9 228 26.8
TPR.G36116 Trifolium pratense HOM05D002925 ORTHO05D003247 7.1e-18 95.9 157 35.0
CDE10G0644 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 9.3e-18 95.5 211 27.0
Solyc04g074250.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 9.3e-18 95.5 229 27.5
Sopen04g029390 Solanum pennellii HOM05D002925 ORTHO05D003247 9.3e-18 95.5 229 27.5
Dinv14338 Davidia involucrata HOM05D002925 ORTHO05D003247 1.2e-17 95.1 144 34.7
FAN18G3145 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.2e-17 95.1 155 32.9
Phvul.009G031600 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 1.2e-17 95.1 153 37.3
Rhsim11G0137200 Rhododendron simsii HOM05D002925 ORTHO05D003247 1.2e-17 95.1 261 26.1
FvH4_5g37120 Fragaria vesca HOM05D002925 ORTHO05D003247 1.6e-17 94.7 163 33.1
FAN13G2209 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.6e-17 94.7 189 31.2
Potri.005G164100 Populus trichocarpa HOM05D002925 ORTHO05D003247 1.6e-17 94.7 234 27.8
Hund06376 Selenicereus undatus HOM05D002925 ORTHO05D003247 1.6e-17 94.7 130 38.5
FAN04G0469 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.1e-17 94.4 193 30.6
Nitab4.5_0006616g0010 Nicotiana tabacum HOM05D002925 ORTHO05D003247 3.5e-17 93.6 225 25.8
SGA_v2.0_scaffold74G24580 Striga asiatica HOM05D002925 ORTHO05D003247 3.5e-17 93.6 224 28.6
TWI56G0820 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 4.6e-17 93.2 232 27.2
Lalb_Chr11g0065401 Lupinus albus HOM05D002925 ORTHO05D003247 6.0e-17 92.8 124 40.3
MD08G1184300 Malus domestica HOM05D002925 ORTHO05D003247 1.0e-16 92.0 107 43.0
CSS0032438 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 1.3e-16 91.7 232 25.9
FAN08G0410 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.3e-16 91.7 189 30.2
VMungo1309G2842 Vigna mungo HOM05D002925 ORTHO05D003247 3.9e-16 90.1 131 39.7
PSO541G2635 Papaver somniferum HOM05D002925 ORTHO05D003247 5.1e-16 89.7 127 37.8
Ah.05g169890 Amaranthus hybridus HOM05D002925 ORTHO05D003247 6.7e-16 89.4 241 27.4
Gohir.D01G114901 Gossypium hirsutum HOM05D002925 ORTHO05D003247 1.1e-15 88.6 164 34.1
Gorai.002G140700 Gossypium raimondii HOM05D002925 ORTHO05D003247 1.1e-15 88.6 164 34.1
Gohir.A01G127000 Gossypium hirsutum HOM05D002925 ORTHO05D003247 1.9e-15 87.8 164 33.5
ECA232G4158 Erigeron canadensis HOM05D002925 ORTHO05D003247 3.3e-15 87.0 221 26.2
Prupe.1G518500 Prunus persica HOM05D002925 ORTHO05D003247 3.3e-15 87.0 124 36.3
HPP92_011216 Vanilla planifolia HOM05D002925 ORTHO05D003247 3.3e-15 87.0 114 39.5
MSTRG.24975 Avicennia marina HOM05D002925 ORTHO05D003247 4.3e-15 86.7 126 34.1
HanXRQChr02g0043481 Helianthus annuus HOM05D002925 ORTHO05D003247 4.3e-15 86.7 158 33.5
BcaC06g34950 Brassica carinata HOM05D002925 ORTHO05D003247 5.7e-15 86.3 140 32.1
BolC7t42671H Brassica oleracea HOM05D000298 ORTHO05D003247 5.7e-15 86.3 140 32.1
Ciclev10000205m.g Citrus clementina HOM05D002925 ORTHO05D003247 5.7e-15 86.3 152 34.9
RcHm_v2.0_Chr7g0243951 Rosa chinensis HOM05D002925 ORTHO05D003247 5.7e-15 86.3 164 31.1
C07p21440 Brassica napus HOM05D002925 ORTHO05D003247 7.4e-15 85.9 140 32.9
Sp1g19810 Schrenkiella parvula HOM05D002925 ORTHO05D003247 7.4e-15 85.9 177 29.4
EL10Ac9g21492 Beta vulgaris HOM05D002925 ORTHO05D003247 1.3e-14 85.1 225 28.9
MBI02_g35745_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 1.3e-14 85.1 114 36.8
Zm00001eb101320 Zea mays HOM05D002925 ORTHO05D003247 1.3e-14 85.1 225 30.7
PSO447G0391 Papaver somniferum HOM05D002925 ORTHO05D003247 1.6e-14 84.7 224 27.2
Lsat_1_v5_gn_1_3860 Lactuca sativa HOM05D002925 ORTHO05D003247 2.1e-14 84.3 152 33.6
RcHm_v2.0_Chr7g0238671 Rosa chinensis HOM05D002925 ORTHO05D003247 2.1e-14 84.3 151 31.1
SalBow7G1697 Salvia bowleyana HOM05D002925 ORTHO05D003247 2.1e-14 84.3 228 27.2
A07p14550 Brassica napus HOM05D002925 ORTHO05D003247 3.7e-14 83.6 120 32.5
BraA07t29201Z Brassica rapa HOM05D002925 ORTHO05D003247 3.7e-14 83.6 120 32.5
Duzib116G0838 Durio zibethinus HOM05D002925 ORTHO05D003247 3.7e-14 83.6 183 30.6
Os08g0485700 Oryza sativa ssp. japonica HOM05D002925 ORTHO05D003247 4.8e-14 83.2 211 29.9
AT1G22310 Arabidopsis thaliana HOM05D002925 ORTHO05D003247 8.2e-14 82.4 140 32.1
Duzib093G1387 Durio zibethinus HOM05D002925 ORTHO05D003247 8.2e-14 82.4 180 31.1
DCAR_008741 Daucus carota HOM05D002925 ORTHO05D003247 1.1e-13 82.0 131 34.4
THA.LOC104800147 Tarenaya hassleriana HOM05D002925 ORTHO05D003247 1.1e-13 82.0 144 35.4
CANSAT25G0699 Cannabis sativa HOM05D002925 ORTHO05D003247 1.4e-13 81.6 219 30.6
HanXRQChr05g0145421 Helianthus annuus HOM05D002925 ORTHO05D003247 1.4e-13 81.6 169 29.0
Aa31LG7G6230 Aethionema arabicum HOM05D002925 ORTHO05D003247 1.8e-13 81.3 164 31.1
Actinidia33129 Actinidia chinensis HOM05D002925 ORTHO05D003247 2.4e-13 80.9 194 27.8
BcaB03g14218 Brassica carinata HOM05D002925 ORTHO05D003247 2.4e-13 80.9 181 30.4
AUR62027772 Chenopodium quinoa HOM05D002925 ORTHO05D003247 2.4e-13 80.9 230 27.0
Cc10_g07100 Coffea canephora HOM05D002925 ORTHO05D003247 2.4e-13 80.9 160 33.8
Os08g0485600 Oryza sativa ssp. japonica HOM05D002925 ORTHO05D003247 3.1e-13 80.5 210 29.5
AL1G35760 Arabidopsis lyrata HOM05D002925 ORTHO05D003247 4.1e-13 80.1 99 36.4
ECA247G0600 Erigeron canadensis HOM05D002925 ORTHO05D003247 5.3e-13 79.7 160 33.1
unitig_8.g5045 Utricularia gibba HOM05D002925 ORTHO05D003247 5.3e-13 79.7 250 28.0
Carub.0001s2186 Capsella rubella HOM05D002925 ORTHO05D003247 9.0e-13 79.0 160 32.5
Psat5g138880 Pisum sativum HOM05D002925 ORTHO05D003247 9.0e-13 79.0 214 27.6
Thhalv10007200m.g Eutrema salsugineum HOM05D002925 ORTHO05D003247 1.5e-12 78.2 122 31.1
ATR0782G164 Amborella trichopoda HOM05D002925 ORTHO05D003247 2.0e-12 77.8 187 26.7
CARHR022690 Cardamine hirsuta HOM05D002925 ORTHO05D003247 2.6e-12 77.4 139 33.1
arahy.Tifrunner.gnm1.ann1.66CWE3 Arachis hypogaea HOM05D002925 ORTHO05D003247 3.4e-12 77.0 87 40.2
arahy.Tifrunner.gnm1.ann1.8R41I4 Arachis hypogaea HOM05D002925 ORTHO05D003247 3.4e-12 77.0 87 40.2
EL10Ac1g01207 Beta vulgaris HOM05D002925 ORTHO05D003247 3.4e-12 77.0 268 25.7
COL.COLO4_16382 Corchorus olitorius HOM05D002925 ORTHO05D003247 4.5e-12 76.6 180 31.1
Cpa.g.sc42.36 Carica papaya HOM05D002925 ORTHO05D003247 7.6e-12 75.9 107 38.3
TPR.G25224 Trifolium pratense HOM05D002925 ORTHO05D003247 1.3e-11 75.1 97 36.1
TPR.G26131 Trifolium pratense HOM05D002925 ORTHO05D003247 1.7e-11 74.7 95 41.1
PGR031G1025 Punica granatum HOM05D002925 ORTHO05D003247 2.9e-11 73.9 179 30.2
vmacro01831 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 1.1e-10 72.0 95 35.8
Lj1g0024313 Lotus japonicus HOM05D002925 ORTHO05D003247 1.4e-10 71.6 99 40.4
Medtr3g074640 Medicago truncatula HOM05D002925 ORTHO05D003247 3.2e-10 70.5 170 30.6
SEGI_07396 Sequoiadendron giganteum HOM05D002925 ORTHO05D003247 4.2e-10 70.1 197 26.9
SGA_v2.0_scaffold74G24575 Striga asiatica HOM05D002925 ORTHO05D003247 2.1e-09 67.8 218 26.6
ECA232G0543 Erigeron canadensis HOM05D002925 ORTHO05D003247 2.7e-09 67.4 107 36.4
Rhsim06G0081200 Rhododendron simsii HOM05D002925 ORTHO05D003247 2.7e-09 67.4 229 23.6
Haze_22282 Corylus avellana HOM05D002925 ORTHO05D003247 3.9e-08 63.5 108 32.4
QL12p036977 Quercus lobata HOM05D002925 ORTHO05D003247 5.1e-08 63.2 94 33.0
Os09g0473350 Oryza sativa ssp. japonica HOM05D002925 ORTHO05D003247 6.7e-08 62.8 94 38.3
Haze_10615 Corylus avellana HOM05D002925 ORTHO05D003247 4.3e-07 60.1 129 34.1
PSO531G0001 Papaver somniferum HOM05D002925 ORTHO05D003247 5.7e-07 59.7 102 27.5
Nn5g30080 Nelumbo nucifera HOM05D002925 ORTHO05D003247 9.7e-07 58.9 100 32.0
Thecc.02G136800 Theobroma cacao HOM05D002925 ORTHO05D003247 1.6e-06 58.2 92 38.0
vmacro01830 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 2.2e-06 57.8 120 31.7


User provided reference genes

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