Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 0.0e+00 1102.4 709 100.0
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 1.6e-167 594.0 766 59.5
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 1.1e-131 474.9 723 54.9
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 3.8e-105 386.7 544 47.8
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 4.9e-105 386.3 773 49.9
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 8.4e-105 385.6 516 49.6
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 8.4e-105 385.6 803 46.8
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 6.2e-100 369.4 517 47.8
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 6.2e-100 369.4 543 46.0
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 1.4e-99 368.2 789 45.4
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 6.9e-99 365.9 488 48.8
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 5.8e-98 362.8 451 49.7
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 2.2e-97 360.9 528 46.8
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 8.4e-97 359.0 546 46.3
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 1.6e-95 354.8 820 42.3
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 1.6e-95 354.8 507 46.0
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 2.7e-95 354.0 795 40.5
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 3.5e-95 353.6 833 39.6
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 1.3e-94 351.7 821 40.7
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.1e-93 348.6 538 44.1
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 3.3e-93 347.1 477 47.6
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 3.7e-92 343.6 547 44.6
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 6.2e-92 342.8 505 46.9
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.1e-91 342.0 538 44.2
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 4.0e-91 340.1 810 45.1
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 5.8e-90 336.3 372 53.8
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 2.2e-89 334.3 489 44.8
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 4.9e-89 333.2 549 43.0
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 8.4e-89 332.4 484 46.1
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 1.9e-88 331.3 810 42.2
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.9e-88 331.3 832 40.7
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 3.2e-88 330.5 458 46.7
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 4.2e-88 330.1 808 45.2
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 1.8e-86 324.7 391 52.2
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 2.3e-86 324.3 780 42.6
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 3.0e-86 323.9 545 42.6
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 3.0e-86 323.9 827 42.8
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 1.1e-85 322.0 558 41.4
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 5.7e-85 319.7 570 40.9
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 5.7e-85 319.7 427 48.9
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 7.4e-85 319.3 520 44.4
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 1.3e-84 318.5 570 40.7
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 2.1e-84 317.8 521 42.4
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 2.8e-84 317.4 787 46.0
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 6.2e-84 316.2 502 43.4
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 1.4e-83 315.1 854 41.7
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 2.4e-83 314.3 506 43.5
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 4.1e-83 313.5 488 44.5
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 5.3e-83 313.2 504 42.3
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 7.6e-82 309.3 508 42.3
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 1.0e-81 308.9 511 42.9
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 1.3e-81 308.5 564 42.2
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 1.7e-81 308.1 504 41.7
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 2.9e-81 307.4 487 43.9
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 6.5e-81 306.2 393 51.1
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 1.1e-80 305.4 540 40.2
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 1.4e-80 305.1 486 43.2
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 2.5e-80 304.3 503 41.7
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 3.5e-79 300.4 509 43.4
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 4.6e-79 300.1 366 50.3
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 7.9e-79 299.3 520 41.2
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 1.8e-78 298.1 847 37.1
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 3.0e-78 297.4 506 42.9
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 3.0e-78 297.4 461 43.8
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 3.0e-78 297.4 523 41.3
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 1.1e-77 295.4 559 41.1
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 2.5e-77 294.3 778 39.3
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 8.2e-76 289.3 873 42.7
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 1.8e-75 288.1 507 40.0
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 3.1e-75 287.3 488 41.6
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 4.1e-75 287.0 488 41.0
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 9.0e-75 285.8 385 47.0
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 1.5e-74 285.0 844 42.8
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 4.5e-74 283.5 488 41.8
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 1.0e-73 282.3 789 42.0
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 1.7e-73 281.6 867 41.8
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 6.5e-73 279.6 568 38.4
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 7.2e-72 276.2 854 43.2
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 1.0e-70 272.3 379 46.2
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 1.1e-69 268.9 782 41.6
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 2.0e-69 268.1 468 39.7
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 5.7e-69 266.5 557 39.1
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 1.1e-67 262.3 510 39.8
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 1.8e-67 261.5 377 45.6
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 2.6e-66 257.7 743 33.8
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 4.2e-64 250.4 484 37.8
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 7.2e-64 249.6 365 43.0
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 3.6e-63 247.3 494 38.5
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 1.8e-62 245.0 465 40.4
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.1e-61 242.3 255 55.7
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 1.1e-61 242.3 502 38.4
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 7.4e-61 239.6 375 41.3
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 1.4e-59 235.3 394 39.8
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 2.2e-57 228.0 330 46.1
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 4.2e-56 223.8 286 50.3
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 7.5e-53 213.0 393 39.4
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 4.7e-47 193.7 637 41.3
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 5.5e-40 170.2 195 53.8
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 1.2e-39 169.1 340 37.4
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 4.7e-39 167.2 205 50.7
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 2.9e-33 147.9 293 34.5
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 3.7e-28 131.0 349 32.4
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-10 72.0 134 33.6
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 2.5e-08 65.1 59 47.5
PRCOL_00002654 Prasinoderma coloniale HOM05D002594 ORTHO05D003499 8.9e-06 56.6 55 38.2


User provided reference genes

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