Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0332681 Helianthus annuus HOM05D003682 ORTHO05D004224 3.7e-32 141.0 72 100.0
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 4.6e-19 97.4 52 92.3
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 3.6e-11 71.2 59 64.4
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 4.6e-11 70.9 52 71.2
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 1.3e-08 62.8 52 65.4
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 4.8e-08 60.8 52 59.6
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 6.3e-08 60.5 51 60.8
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 6.3e-08 60.5 52 57.7
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 8.2e-08 60.1 52 59.6
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 1.1e-07 59.7 53 60.4
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 1.1e-07 59.7 52 57.7
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 1.4e-07 59.3 54 59.3
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 1.4e-07 59.3 52 59.6
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 1.8e-07 58.9 53 62.3
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 1.8e-07 58.9 60 51.7
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 2.4e-07 58.5 52 53.8
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 2.4e-07 58.5 53 54.7
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 2.4e-07 58.5 52 61.5
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 2.4e-07 58.5 52 59.6
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 3.1e-07 58.2 52 55.8
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 3.1e-07 58.2 53 58.5
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 4.1e-07 57.8 60 48.3
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.1e-07 57.8 53 60.4
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 4.1e-07 57.8 53 58.5
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 5.3e-07 57.4 52 57.7
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 6.9e-07 57.0 53 56.6
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 6.9e-07 57.0 51 56.9
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.2e-06 56.2 52 59.6
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 1.2e-06 56.2 54 51.9
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 1.2e-06 56.2 53 54.7
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 1.2e-06 56.2 51 54.9
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.5e-06 55.8 51 58.8
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 1.5e-06 55.8 53 56.6
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.0e-06 55.5 52 57.7
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.0e-06 55.5 51 58.8
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 2.0e-06 55.5 51 58.8
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 2.6e-06 55.1 51 52.9
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 2.6e-06 55.1 59 47.5
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 3.4e-06 54.7 37 62.2
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 3.4e-06 54.7 53 52.8
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 5.9e-06 53.9 36 63.9
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 7.7e-06 53.5 37 59.5


User provided reference genes

Program Settings