Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0328521 Helianthus annuus HOM05D000684 ORTHO05D225664 1.9e-86 322.4 157 100.0
HanXRQChr15g0494631 Helianthus annuus HOM05D000684 ORTHO05D000688 3.0e-15 85.9 161 44.7
Lsat_1_v5_gn_7_104161 Lactuca sativa HOM05D000684 ORTHO05D000688 9.2e-12 74.3 190 37.9
Thhalv10011249m.g Eutrema salsugineum HOM05D000684 ORTHO05D000688 1.6e-11 73.6 164 37.2
ECA236G4458 Erigeron canadensis HOM05D000684 ORTHO05D000688 2.7e-11 72.8 188 38.3
BcaB02g10928 Brassica carinata HOM05D000684 ORTHO05D000688 6.6e-10 68.2 156 38.5
GSVIVG01014334001 Vitis vinifera HOM05D000684 ORTHO05D000688 1.9e-09 66.6 161 36.6
ECA240G3895 Erigeron canadensis HOM05D000684 ORTHO05D000688 3.3e-09 65.9 182 37.9
DCAR_013108 Daucus carota HOM05D000684 ORTHO05D000688 5.6e-09 65.1 188 35.1
Aa31LG10G2040 Aethionema arabicum HOM05D000684 ORTHO05D000688 7.3e-09 64.7 172 35.5
AL1G61450 Arabidopsis lyrata HOM05D000684 ORTHO05D000688 7.3e-09 64.7 169 36.1
CSS0027665 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D000688 7.3e-09 64.7 217 30.9
Lsat_1_v5_gn_9_98081 Lactuca sativa HOM05D000684 ORTHO05D000688 7.3e-09 64.7 178 37.1
BcaC08g44044 Brassica carinata HOM05D000684 ORTHO05D000688 1.2e-08 63.9 160 37.5
A05p34130 Brassica napus HOM05D000684 ORTHO05D000688 1.2e-08 63.9 172 34.3
C06p14450 Brassica napus HOM05D000684 ORTHO05D000688 1.2e-08 63.9 160 37.5
BolC6t36625H Brassica oleracea HOM05D000684 ORTHO05D000688 1.2e-08 63.9 160 37.5
AT3G15354 Arabidopsis thaliana HOM05D000684 ORTHO05D000688 2.1e-08 63.2 186 31.7
BraA05t22234Z Brassica rapa HOM05D000684 ORTHO05D000688 2.1e-08 63.2 172 34.9
Sp1g39640 Schrenkiella parvula HOM05D000684 ORTHO05D000688 2.1e-08 63.2 166 34.9
AL3G27760 Arabidopsis lyrata HOM05D000684 ORTHO05D000688 4.7e-08 62.0 186 32.3
A05p18630 Brassica napus HOM05D000684 ORTHO05D000688 4.7e-08 62.0 156 35.9
BraA05t20754Z Brassica rapa HOM05D000684 ORTHO05D000688 4.7e-08 62.0 156 35.9
Thhalv10020057m.g Eutrema salsugineum HOM05D000684 ORTHO05D000688 6.1e-08 61.6 186 31.2
BcaC05g28991 Brassica carinata HOM05D000684 ORTHO05D000688 8.0e-08 61.2 172 36.6
BcaC09g48495 Brassica carinata HOM05D000684 ORTHO05D000688 8.0e-08 61.2 167 34.7
C01p49140 Brassica napus HOM05D000684 ORTHO05D000688 8.0e-08 61.2 167 34.7
C05p51880 Brassica napus HOM05D000684 ORTHO05D000688 8.0e-08 61.2 172 34.9
BolC1t04878H Brassica oleracea HOM05D000684 ORTHO05D000688 8.0e-08 61.2 167 34.7
BolC5t33875H Brassica oleracea HOM05D000684 ORTHO05D000688 8.0e-08 61.2 172 36.6
Cc05_g12010 Coffea canephora HOM05D000684 ORTHO05D000688 8.0e-08 61.2 214 33.2
Actinidia12802 Actinidia chinensis HOM05D000684 ORTHO05D000688 1.0e-07 60.8 183 32.8
Oeu011690.1 Olea europaea HOM05D000684 ORTHO05D000688 1.0e-07 60.8 175 36.0
BcaB06g29558 Brassica carinata HOM05D000684 ORTHO05D000688 1.8e-07 60.1 173 33.5
BraA01t03919Z Brassica rapa HOM05D000684 ORTHO05D000688 1.8e-07 60.1 167 35.3
CARHR090320 Cardamine hirsuta HOM05D000684 ORTHO05D000688 4.0e-07 58.9 178 29.8
Dinv04304 Davidia involucrata HOM05D000084 ORTHO05D000363 4.0e-07 58.9 213 31.5
A01p38650 Brassica napus HOM05D000684 ORTHO05D000688 5.2e-07 58.5 167 35.9
Carub.0003s1500 Capsella rubella HOM05D000684 ORTHO05D000688 5.2e-07 58.5 186 31.7
Sp3g13540 Schrenkiella parvula HOM05D000684 ORTHO05D000688 5.2e-07 58.5 186 30.6
Carub.0001s4225 Capsella rubella HOM05D000684 ORTHO05D000688 8.9e-07 57.8 142 37.3
Nitab4.5_0000332g0110 Nicotiana tabacum HOM05D000684 ORTHO05D000688 1.5e-06 57.0 187 34.8
Solyc07g063120.4 Solanum lycopersicum HOM05D000684 ORTHO05D000688 1.5e-06 57.0 211 32.7
AT1G53090 Arabidopsis thaliana HOM05D000684 ORTHO05D000688 2.0e-06 56.6 172 33.7
CAN.G162.56 Capsicum annuum HOM05D000684 ORTHO05D000688 2.0e-06 56.6 57 57.9
Nitab4.5_0013057g0010 Nicotiana tabacum HOM05D000684 ORTHO05D000688 2.0e-06 56.6 187 33.2
GSVIVG01020557001 Vitis vinifera HOM05D000684 ORTHO05D000688 2.0e-06 56.6 175 33.1
Lj1C842T9 Lonicera japonica HOM05D000684 ORTHO05D000688 3.4e-06 55.8 215 32.6
Nitab4.5_0001336g0040 Nicotiana tabacum HOM05D000684 ORTHO05D000688 3.4e-06 55.8 210 30.5
CAN.G1660.1 Capsicum annuum HOM05D000684 ORTHO05D000688 4.4e-06 55.5 197 33.0
Sc16g0007000 Simmondsia chinensis HOM05D000684 ORTHO05D000688 5.8e-06 55.1 214 29.9
Sopen07g031310 Solanum pennellii HOM05D000684 ORTHO05D000688 5.8e-06 55.1 212 31.1
Hma1.2p1_0531F.1_g173340 Hydrangea macrophylla HOM05D000684 ORTHO05D000688 7.5e-06 54.7 213 30.5
CARHR043310 Cardamine hirsuta HOM05D000684 ORTHO05D000688 9.8e-06 54.3 52 50.0
Nitab4.5_0001241g0010 Nicotiana tabacum HOM05D000684 ORTHO05D000688 9.8e-06 54.3 209 30.6
Sed0021610 Sechium edule HOM05D000684 ORTHO05D000688 9.8e-06 54.3 217 29.0
Solyc12g013840.3 Solanum lycopersicum HOM05D000684 ORTHO05D000688 9.8e-06 54.3 197 32.0


User provided reference genes

Program Settings