Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 1.2e-228 796.2 396 100.0
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 7.6e-172 607.4 395 79.2
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 3.2e-170 602.1 388 79.4
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 7.6e-148 527.7 397 69.3
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 4.9e-147 525.0 406 69.0
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 6.5e-147 524.6 397 69.0
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 2.5e-146 522.7 408 68.1
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 7.9e-145 517.7 402 68.7
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.8e-144 516.5 398 69.6
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 2.3e-144 516.2 404 68.1
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 3.0e-144 515.8 404 67.1
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 6.7e-144 514.6 394 67.3
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 1.1e-143 513.8 392 68.4
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.1e-143 513.8 406 67.0
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.9e-143 513.1 400 67.5
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 2.5e-143 512.7 400 67.5
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 4.3e-143 511.9 395 68.1
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 1.3e-142 510.4 402 68.2
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 8.2e-142 507.7 404 65.1
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 1.1e-141 507.3 404 64.9
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.4e-141 506.9 398 65.8
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.8e-141 506.5 403 66.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 3.1e-141 505.8 410 65.4
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 4.1e-141 505.4 400 67.2
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 9.0e-141 504.2 405 66.2
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.2e-140 503.8 403 66.5
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 1.2e-140 503.8 386 68.1
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 5.9e-140 501.5 386 67.9
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 1.3e-139 500.4 399 64.4
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 1.7e-139 500.0 401 65.1
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.7e-139 500.0 407 66.1
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 3.8e-139 498.8 402 66.2
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 3.8e-139 498.8 406 65.3
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 6.5e-139 498.0 405 64.2
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.1e-138 497.3 420 64.0
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 1.4e-138 496.9 411 64.2
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.9e-138 496.5 410 63.7
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.9e-138 496.5 405 64.2
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 3.2e-138 495.7 405 64.7
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 5.5e-138 495.0 406 65.5
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 5.5e-138 495.0 405 64.2
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 2.7e-137 492.7 399 64.9
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.0e-136 490.7 426 62.7
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.0e-136 490.7 396 65.9
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.4e-136 490.3 410 64.1
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.3e-136 489.6 396 65.4
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 3.0e-136 489.2 410 63.4
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 6.7e-136 488.0 393 64.9
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.1e-135 487.3 405 63.7
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.3e-134 483.8 389 64.0
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 1.3e-134 483.8 377 69.8
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 1.7e-134 483.4 404 62.6
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 1.7e-134 483.4 387 65.1
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 1.4e-133 480.3 389 64.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 2.4e-133 479.6 393 63.1
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 4.1e-133 478.8 380 68.2
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 9.1e-133 477.6 385 65.7
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 9.1e-133 477.6 385 65.7
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.5e-132 476.9 366 68.0
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 1.5e-132 476.9 385 65.5
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.6e-132 476.1 403 62.0
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.7e-131 473.4 382 67.5
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 2.9e-131 472.6 393 62.8
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 2.9e-131 472.6 381 64.8
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 3.8e-131 472.2 382 68.1
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 6.5e-131 471.5 399 63.4
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 1.6e-129 466.8 387 63.8
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 1.8e-128 463.4 384 63.8
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 3.0e-128 462.6 377 66.3
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 6.7e-128 461.5 400 62.0
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 7.4e-127 458.0 388 63.4
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.4e-127 458.0 391 63.2
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 2.2e-126 456.4 406 59.1
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 3.7e-126 455.7 394 62.4
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.1e-125 454.1 396 62.4
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 2.4e-125 453.0 401 61.8
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 3.1e-125 452.6 408 59.6
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 4.1e-125 452.2 408 59.1
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 7.0e-125 451.4 399 62.4
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 9.1e-125 451.1 394 62.7
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 9.1e-125 451.1 409 58.9
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 4.5e-124 448.7 403 59.6
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 4.5e-124 448.7 406 58.9
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 3.8e-123 445.7 395 60.5
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 3.8e-123 445.7 395 60.5
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 3.8e-123 445.7 395 60.5
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 8.5e-123 444.5 399 59.9
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 1.1e-122 444.1 402 59.5
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.9e-122 443.4 399 59.6
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 1.0e-120 437.6 397 59.2
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 1.8e-120 436.8 386 61.9
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 5.2e-120 435.3 377 63.1
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 9.1e-117 424.5 463 53.8
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 4.1e-109 399.1 350 62.0
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 1.6e-108 397.1 385 57.7
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 6.1e-105 385.2 251 77.3
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 3.5e-100 369.4 255 74.9
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.0e-96 357.8 254 73.6
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 2.4e-93 346.7 452 44.7
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 1.6e-92 344.0 241 73.9
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.3e-90 335.1 262 69.8
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 6.1e-89 332.0 381 47.5
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.5e-87 327.4 245 71.8
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 5.8e-87 325.5 457 42.0
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 2.3e-83 313.5 381 48.6
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 4.4e-79 299.3 456 40.4
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 2.1e-68 263.8 416 39.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 1.8e-64 250.8 270 55.6
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.9e-61 240.7 187 68.4
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 5.8e-55 219.2 145 80.7
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 1.0e-43 181.8 167 52.1
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.4e-32 144.1 207 36.7
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 4.5e-31 139.8 156 50.6
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 1.6e-28 131.3 403 29.3
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 2.7e-28 130.6 186 45.7
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 1.3e-27 128.3 167 38.3
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 3.2e-21 107.1 96 53.1
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 5.5e-21 106.3 98 60.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 3.9e-19 100.1 69 73.9
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 4.1e-08 63.5 94 40.4


User provided reference genes

Program Settings