Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0325851 Helianthus annuus HOM05D002762 ORTHO05D004643 5.7e-52 207.2 98 100.0
HanXRQChr11g0325861 Helianthus annuus HOM05D002762 ORTHO05D004643 2.4e-34 148.7 80 88.8
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 2.2e-32 142.1 78 87.2
Lsat_1_v5_gn_5_47620 Lactuca sativa HOM05D002762 ORTHO05D004643 5.3e-26 120.9 73 79.5
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 5.9e-25 117.5 73 76.7
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 3.8e-24 114.8 72 75.0
GSVIVG01017859001 Vitis vinifera HOM05D002762 ORTHO05D004643 1.5e-23 112.8 76 68.4
DCAR_030582 Daucus carota HOM05D002762 ORTHO05D004643 4.2e-23 111.3 77 70.1
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 5.5e-23 110.9 72 72.2
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea HOM05D002762 ORTHO05D004643 1.2e-22 109.8 85 64.7
CSS0044156 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 2.7e-22 108.6 73 68.5
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 4.7e-22 107.8 72 72.2
Actinidia23462 Actinidia chinensis HOM05D002762 ORTHO05D004643 6.1e-22 107.5 73 68.5
Lj3C805G9 Lonicera japonica HOM05D002762 ORTHO05D004643 6.1e-22 107.5 73 69.9
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 1.0e-21 106.7 72 70.8
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea HOM05D002762 ORTHO05D004643 1.0e-21 106.7 74 68.9
MSTRG.3976 Avicennia marina HOM05D002762 ORTHO05D004643 1.8e-21 105.9 73 69.9
CiPaw.01G157300 Carya illinoinensis HOM05D002762 ORTHO05D004643 2.3e-21 105.5 78 66.7
SalBow2G0360 Salvia bowleyana HOM05D002762 ORTHO05D004643 2.3e-21 105.5 73 68.5
SalBow2G3267 Salvia bowleyana HOM05D002762 ORTHO05D004643 2.3e-21 105.5 73 68.5
CARHR222230 Cardamine hirsuta HOM05D002762 ORTHO05D004643 3.0e-21 105.1 84 61.9
Sc19g0004700 Simmondsia chinensis HOM05D002762 ORTHO05D004643 3.0e-21 105.1 72 68.1
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 4.0e-21 104.8 72 69.4
vmacro08247 Vaccinium macrocarpon HOM05D002762 ORTHO05D004643 4.0e-21 104.8 73 67.1
Thhalv10024700m.g Eutrema salsugineum HOM05D002762 ORTHO05D004643 5.2e-21 104.4 76 64.5
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 5.2e-21 104.4 88 58.0
Solyc06g054430.1 Solanum lycopersicum HOM05D002762 ORTHO05D004643 5.2e-21 104.4 82 61.0
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 6.7e-21 104.0 72 66.7
Carub.0007s2643 Capsella rubella HOM05D002762 ORTHO05D004643 6.7e-21 104.0 72 66.7
Cc03_g02820 Coffea canephora HOM05D002762 ORTHO05D004643 6.7e-21 104.0 77 67.5
Migut.G00244 Erythranthe guttata HOM05D002762 ORTHO05D004643 6.7e-21 104.0 73 67.1
Migut.G00246 Erythranthe guttata HOM05D002762 ORTHO05D004643 6.7e-21 104.0 73 67.1
Sopen06g019510 Solanum pennellii HOM05D002762 ORTHO05D004643 6.7e-21 104.0 86 59.3
PGSC0003DMG400030790 Solanum tuberosum HOM05D002762 ORTHO05D004643 6.7e-21 104.0 86 59.3
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 8.8e-21 103.6 72 66.7
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 8.8e-21 103.6 72 66.7
Nitab4.5_0002295g0030 Nicotiana tabacum HOM05D002762 ORTHO05D004643 8.8e-21 103.6 73 64.4
Rhsim04G0212100 Rhododendron simsii HOM05D002762 ORTHO05D004643 8.8e-21 103.6 79 59.5
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 8.8e-21 103.6 72 69.4
Aa31LG9G1950 Aethionema arabicum HOM05D002762 ORTHO05D004643 1.1e-20 103.2 72 68.1
AL7G40070 Arabidopsis lyrata HOM05D002762 ORTHO05D004643 1.1e-20 103.2 72 65.3
Cfa015545 Carpinus fangiana HOM05D002762 ORTHO05D004643 1.1e-20 103.2 78 64.1
Haze_01003 Corylus avellana HOM05D002762 ORTHO05D004643 1.1e-20 103.2 78 64.1
THA.LOC104802549 Tarenaya hassleriana HOM05D002762 ORTHO05D004643 1.5e-20 102.8 92 56.5
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 2.0e-20 102.4 72 66.7
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 2.0e-20 102.4 72 65.3
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 2.0e-20 102.4 72 65.3
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 2.0e-20 102.4 72 66.7
MELO3C021388.2 Cucumis melo HOM05D002762 ORTHO05D004643 2.0e-20 102.4 73 65.8
CsaV3_6G005490 Cucumis sativus L. HOM05D002762 ORTHO05D004643 2.0e-20 102.4 73 65.8
Lj6g0020038 Lotus japonicus HOM05D002762 ORTHO05D004643 2.0e-20 102.4 76 64.5
CAN.G1247.4 Capsicum annuum HOM05D002762 ORTHO05D004643 2.6e-20 102.1 73 61.6
Phvul.006G157700 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 2.6e-20 102.1 73 65.8
TAR362G1268 Trochodendron aralioides HOM05D002762 ORTHO05D004643 3.3e-20 101.7 77 63.6
VMungo0540G1770 Vigna mungo HOM05D002762 ORTHO05D004643 3.3e-20 101.7 73 64.4
AT4G15475 Arabidopsis thaliana HOM05D002762 ORTHO05D004643 4.4e-20 101.3 72 63.9
CANSAT78G1359 Cannabis sativa HOM05D002762 ORTHO05D004643 5.7e-20 100.9 72 63.9
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 7.4e-20 100.5 72 63.9
Sed0001779 Sechium edule HOM05D002762 ORTHO05D004643 7.4e-20 100.5 73 63.0
TWI73G1094 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 7.4e-20 100.5 72 63.9
Psat1g185320 Pisum sativum HOM05D002762 ORTHO05D004643 9.7e-20 100.1 72 65.3
Ca_00594_v3 Cicer arietinum L. HOM05D002762 ORTHO05D004643 1.3e-19 99.8 72 65.3
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 1.7e-19 99.4 74 66.2
MD13G1179300 Malus domestica HOM05D002762 ORTHO05D004643 2.2e-19 99.0 87 56.3
PGR031G1661 Punica granatum HOM05D002762 ORTHO05D004643 2.2e-19 99.0 88 56.8
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 2.8e-19 98.6 72 63.9
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 2.8e-19 98.6 74 66.2
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 3.7e-19 98.2 76 61.8
Glyma.13G211600 Glycine max HOM05D002762 ORTHO05D004643 4.8e-19 97.8 73 61.6
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 4.8e-19 97.8 86 57.0
Lalb_Chr20g0118281 Lupinus albus HOM05D002762 ORTHO05D004643 6.3e-19 97.4 76 56.6
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 6.3e-19 97.4 72 63.9
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 8.2e-19 97.1 72 65.3
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 8.2e-19 97.1 79 58.2
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 8.2e-19 97.1 72 62.5
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 8.2e-19 97.1 72 62.5
SGA_v2.0_scaffold237G43847 Striga asiatica HOM05D002762 ORTHO05D004643 1.1e-18 96.7 74 60.8
MD16G1180300 Malus domestica HOM05D002762 ORTHO05D004643 1.4e-18 96.3 76 60.5
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 1.4e-18 96.3 72 62.5
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 1.8e-18 95.9 79 58.2
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 1.8e-18 95.9 79 59.5
QL06p006068 Quercus lobata HOM05D002762 ORTHO05D004643 2.4e-18 95.5 78 60.3
Gohir.A09G231600 Gossypium hirsutum HOM05D002762 ORTHO05D004643 4.1e-18 94.7 72 61.1
Eucgr.B01185 Eucalyptus grandis HOM05D002762 ORTHO05D004643 5.3e-18 94.4 72 59.7
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 5.3e-18 94.4 72 62.5
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 5.3e-18 94.4 72 62.5
Cpa.g.c35915 Carica papaya HOM05D002762 ORTHO05D004643 7.0e-18 94.0 74 55.4
TWI09G0048 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 7.0e-18 94.0 72 59.7
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.2e-17 93.2 72 61.1
Prupe.1G147900 Prunus persica HOM05D002762 ORTHO05D004643 1.2e-17 93.2 72 59.7
Aqoxy2G03201 Aquilegia oxysepala HOM05D002762 ORTHO05D004643 2.0e-17 92.4 89 53.9
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 4.5e-17 91.3 87 54.0
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 7.7e-17 90.5 72 58.3
MBI19_g20287_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 2.9e-16 88.6 79 58.2
CDE05G1517 Ceratophyllum demersum HOM05D002762 ORTHO05D004643 6.5e-16 87.4 88 51.1
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 4.2e-15 84.7 73 56.2
Phvul.003G097600 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 7.2e-15 84.0 78 53.8
PSO302G0133 Papaver somniferum HOM05D002762 ORTHO05D004643 9.4e-15 83.6 80 51.2
PSO170G0016 Papaver somniferum HOM05D002762 ORTHO05D004643 2.1e-14 82.4 75 53.3
VMungo1215G0792 Vigna mungo HOM05D002762 ORTHO05D004643 2.1e-14 82.4 74 54.1
ATR0626G340 Amborella trichopoda HOM05D002762 ORTHO05D004643 2.7e-14 82.0 73 53.4
CSS0038196 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 3.6e-14 81.6 91 48.4
SEGI_13295 Sequoiadendron giganteum HOM05D002762 ORTHO05D004643 3.7e-11 71.6 74 45.9
Dinv44461 Davidia involucrata HOM05D002762 ORTHO05D004643 1.8e-10 69.3 44 70.5
AagrBONN_evm.TU.Sc2ySwM_117.2600 Anthoceros agrestis HOM05D002762 ORTHO05D004643 4.1e-10 68.2 82 40.2
HPP92_016898 Vanilla planifolia HOM05D000144 ORTHO05D004643 2.0e-09 65.9 72 48.6
Zm00001eb115300 Zea mays HOM05D002762 ORTHO05D004643 1.7e-08 62.8 76 44.7
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 3.8e-08 61.6 71 40.8
Os11g0641200 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 6.1e-06 54.3 77 36.4


User provided reference genes

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