Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.6e-247 859.0 429 100.0
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.2e-215 753.1 440 85.9
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 5.6e-213 744.2 425 87.3
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.4e-179 633.3 422 73.9
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 8.5e-177 624.0 419 71.6
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 7.2e-176 620.9 435 68.3
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.1e-171 607.1 434 67.3
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.4e-171 606.7 421 70.1
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 5.3e-171 604.7 418 70.3
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 5.3e-171 604.7 418 70.3
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 9.1e-171 604.0 420 69.5
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 9.1e-171 604.0 434 67.1
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.2e-170 603.6 433 68.6
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 4.5e-170 601.7 420 70.2
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.0e-169 600.5 420 68.6
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.2e-169 599.4 420 69.8
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 2.2e-169 599.4 454 67.2
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 6.5e-169 597.8 420 69.8
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 6.5e-169 597.8 428 67.1
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.4e-168 596.7 419 68.3
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.2e-168 595.1 418 68.9
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 5.5e-168 594.7 420 68.1
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.5e-168 594.7 419 68.0
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 5.5e-168 594.7 433 67.7
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 7.2e-168 594.3 434 67.7
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 7.2e-168 594.3 419 68.0
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.1e-167 592.8 418 68.2
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 2.1e-167 592.8 433 67.4
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.7e-167 592.4 419 68.7
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 2.7e-167 592.4 418 67.9
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 8.0e-167 590.9 433 67.0
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.0e-166 590.5 422 69.0
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.0e-166 590.5 419 69.0
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.0e-166 590.5 420 68.6
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.3e-166 589.3 456 64.3
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 3.0e-166 589.0 453 63.6
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 5.2e-166 588.2 421 67.9
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 5.2e-166 588.2 419 68.5
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.1e-165 587.0 451 65.2
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.1e-165 587.0 421 67.9
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.1e-165 587.0 418 69.6
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.1e-165 587.0 419 69.7
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.1e-165 587.0 419 69.7
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.1e-165 587.0 416 68.3
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.5e-165 586.6 418 67.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.5e-165 586.6 419 69.2
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 2.6e-165 585.9 420 67.1
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 4.4e-165 585.1 420 67.6
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 7.4e-165 584.3 413 70.0
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.7e-164 583.2 419 68.5
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 4.8e-164 581.6 421 66.0
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 4.8e-164 581.6 419 67.3
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 8.2e-164 580.9 423 66.2
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.8e-163 579.7 417 67.9
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 7.0e-163 577.8 420 67.1
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 9.1e-163 577.4 419 67.8
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.2e-162 577.0 420 68.1
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.6e-162 576.6 422 66.4
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.0e-162 576.2 433 66.5
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 2.6e-162 575.9 423 65.7
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 4.5e-162 575.1 433 65.6
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 5.9e-162 574.7 421 66.3
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 2.9e-161 572.4 433 66.1
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 5.0e-161 571.6 431 65.2
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 8.5e-161 570.9 417 67.4
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 8.5e-161 570.9 431 64.0
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.5e-160 569.3 417 64.7
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 3.2e-160 568.9 431 64.7
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.1e-159 566.2 418 67.0
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.7e-159 565.8 421 65.8
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 6.1e-159 564.7 421 65.3
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 8.0e-159 564.3 423 63.8
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 3.0e-158 562.4 421 64.6
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.2e-158 561.6 421 64.6
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.6e-157 559.3 471 60.1
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 5.7e-157 558.1 421 64.1
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 9.7e-157 557.4 419 65.4
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.3e-156 557.0 530 56.8
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 1.7e-156 556.6 420 64.0
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 2.8e-156 555.8 421 64.1
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 3.7e-156 555.4 421 64.1
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 3.7e-156 555.4 421 65.3
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 4.8e-156 555.1 421 64.6
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 4.8e-156 555.1 421 64.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 8.2e-156 554.3 420 63.3
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 7.0e-155 551.2 421 63.7
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.2e-154 550.4 420 62.6
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.0e-154 549.7 421 63.2
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 3.5e-154 548.9 418 64.8
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 7.7e-154 547.7 423 63.4
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.5e-153 544.3 418 64.4
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.5e-152 542.7 420 62.9
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.5e-152 542.7 421 63.2
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.2e-152 542.3 419 64.0
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.4e-152 540.8 418 63.6
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 8.0e-151 537.7 433 62.6
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 1.7e-145 520.0 420 60.0
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 2.9e-145 519.2 419 60.1
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 8.6e-145 517.7 417 61.4
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.5e-144 515.0 414 61.1
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 2.8e-140 502.7 421 57.2
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 3.5e-138 495.7 430 58.4
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 8.0e-135 484.6 354 66.9
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.9e-129 465.7 420 53.6
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 6.6e-129 464.9 334 68.3
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.5e-128 463.8 433 55.2
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 2.5e-128 463.0 421 55.1
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 4.0e-126 455.7 419 56.6
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 8.6e-121 438.0 348 64.4
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.9e-120 436.8 430 51.9
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.6e-117 426.4 290 71.0
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.9e-115 420.2 433 48.5
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 8.1e-111 404.8 263 71.5
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 7.6e-109 398.3 425 51.3
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 8.7e-105 384.8 245 73.5
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 4.4e-101 372.5 417 47.7
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 2.1e-87 327.0 419 43.7
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 8.7e-81 305.1 196 74.5
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 2.7e-74 283.5 251 57.4
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 4.1e-62 243.0 182 65.4
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 6.7e-57 225.7 178 61.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 7.5e-40 169.1 136 61.0
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.7e-31 140.2 104 67.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 1.6e-26 124.8 91 62.6
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 4.0e-25 120.2 90 60.0
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.0e-24 117.9 88 64.8
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.9e-11 74.7 351 22.5
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 2.3e-09 67.8 90 44.4
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 6.8e-09 66.2 41 75.6


User provided reference genes

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