Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0318211 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-29 130.2 67 100.0
Lj2A1237T126 Lonicera japonica HOM05D000806 ORTHO05D002320 1.9e-22 108.6 65 86.2
DCAR_032493 Daucus carota HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 1.9e-19 98.6 56 89.3
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 1.9e-19 98.6 56 89.3
HanXRQChr01g0020371 Helianthus annuus HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
HanXRQChr02g0044911 Helianthus annuus HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
HanXRQChr10g0283541 Helianthus annuus HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
HanXRQChr10g0284231 Helianthus annuus HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
HanXRQChr10g0289251 Helianthus annuus HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
HanXRQChr11g0326811 Helianthus annuus HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
HanXRQCPg0580021 Helianthus annuus HOM05D000806 ORTHO05D002320 1.9e-19 98.6 56 89.3
ECA236G1817 Erigeron canadensis HOM05D000806 ORTHO05D000001 3.3e-19 97.8 56 87.5
Lsat_1_v5_gn_8_144641 Lactuca sativa HOM05D000806 ORTHO05D002320 4.3e-19 97.4 56 87.5
MELO3C001225.2 Cucumis melo HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
MELO3C027978.2 Cucumis melo HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 1.6e-18 95.5 56 87.5
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Gohir.A07G163654 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Hma1.2p1_0242F.1_g100623 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Hma1.2p1_0242F.1_g100626 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Hma1.2p1_0242F.1_g100629 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Hma1.2p1_0355F.1_g133923 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Prupe.7G029700 Prunus persica HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.6e-18 95.5 56 87.5
RcHm_v2.0_Chr5g0042991 Rosa chinensis HOM05D000806 ORTHO05D002320 2.1e-18 95.1 56 85.7
RcHm_v2.0_CPg0502101 Rosa chinensis HOM05D000806 ORTHO05D002320 2.1e-18 95.1 56 85.7
Sc03g0005200 Simmondsia chinensis HOM05D000806 ORTHO05D002320 2.1e-18 95.1 67 74.6
EL10As12g24027 Beta vulgaris HOM05D000806 ORTHO05D002320 2.8e-18 94.7 56 85.7
PGR111G0026 Punica granatum HOM05D000806 ORTHO05D002320 3.6e-18 94.4 56 85.7
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.8e-18 94.0 56 85.7
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.8e-18 94.0 56 85.7
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.8e-18 94.0 56 85.7
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 4.8e-18 94.0 56 85.7
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 4.8e-18 94.0 56 85.7
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 4.8e-18 94.0 56 85.7
AUR62006476 Chenopodium quinoa HOM05D000806 ORTHO05D002320 4.8e-18 94.0 56 85.7
AUR62041919 Chenopodium quinoa HOM05D000806 ORTHO05D002324 4.8e-18 94.0 56 85.7
AUR62042261 Chenopodium quinoa HOM05D000806 ORTHO05D002324 4.8e-18 94.0 56 85.7
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 8.1e-18 93.2 56 85.7
CAN.G3.25 Capsicum annuum HOM05D000806 ORTHO05D002320 8.1e-18 93.2 56 85.7
CAN.G653.1 Capsicum annuum HOM05D000806 ORTHO05D002320 8.1e-18 93.2 56 85.7
CAN.G793.44 Capsicum annuum HOM05D000806 ORTHO05D002320 8.1e-18 93.2 56 85.7
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 8.1e-18 93.2 56 85.7
LjContig00318g0000728 Lotus japonicus HOM05D000806 ORTHO05D002320 8.1e-18 93.2 56 85.7
Peaxi162Scf01064g00230 Petunia axillaris HOM05D000806 ORTHO05D002320 8.1e-18 93.2 56 85.7
TPR.G16839 Trifolium pratense HOM05D000806 ORTHO05D002320 8.1e-18 93.2 60 78.3
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.1e-17 92.8 56 83.9
Potri.013G162600 Populus trichocarpa HOM05D000806 ORTHO05D002320 1.1e-17 92.8 56 85.7
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.4e-17 92.4 56 83.9
Eucgr.E02609 Eucalyptus grandis HOM05D000806 ORTHO05D002320 1.4e-17 92.4 56 83.9
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 1.4e-17 92.4 56 83.9
AUR62032522 Chenopodium quinoa HOM05D000806 ORTHO05D002320 1.8e-17 92.0 56 83.9
Gohir.D13G043800 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.8e-17 92.0 56 83.9
Psat2g111000 Pisum sativum HOM05D000806 ORTHO05D002320 1.8e-17 92.0 60 78.3
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 1.8e-17 92.0 56 83.9
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 2.4e-17 91.7 56 83.9
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 2.4e-17 91.7 56 83.9
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 3.1e-17 91.3 56 82.1
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 3.1e-17 91.3 56 83.9
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 3.1e-17 91.3 56 82.1
Nn010s41432 Nelumbo nucifera HOM05D000806 ORTHO05D002320 3.1e-17 91.3 56 83.9
Nn010s41447 Nelumbo nucifera HOM05D000806 ORTHO05D002320 3.1e-17 91.3 56 83.9
PSO548G0072 Papaver somniferum HOM05D000806 ORTHO05D002320 3.1e-17 91.3 56 83.9
Psat0s2754g0160 Pisum sativum HOM05D000806 ORTHO05D002320 3.1e-17 91.3 60 78.3
Psat0s6989g0080 Pisum sativum HOM05D000806 ORTHO05D002320 3.1e-17 91.3 60 78.3
Lj1g0000993 Lotus japonicus HOM05D000806 ORTHO05D002320 6.9e-17 90.1 56 83.9
MD02G1049400 Malus domestica HOM05D000806 ORTHO05D002320 6.9e-17 90.1 56 83.9
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 9.0e-17 89.7 55 87.3
Nn3g21288 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.2e-16 89.4 56 82.1
Lsat_1_v5_gn_9_98941 Lactuca sativa HOM05D000806 ORTHO05D002320 1.5e-16 89.0 56 83.9
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.5e-16 89.0 56 80.4
Nn3g19983 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.5e-16 89.0 56 82.1
AL2G20668 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
ATCG00500 Arabidopsis thaliana HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
arahy.Tifrunner.gnm1.ann1.15M9SP Arachis hypogaea HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
BcaC04g21638 Brassica carinata HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
C02p43520 Brassica napus HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
C09p29580 Brassica napus HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
C09p40220 Brassica napus HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
BraA06t25423Z Brassica rapa HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
BraSC59t46593Z Brassica rapa HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
CAN.G1897.7 Capsicum annuum HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
Eucgr.I02537 Eucalyptus grandis HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 78.6
Thhalv10011034m.g Eutrema salsugineum HOM05D000806 ORTHO05D002320 2.6e-16 88.2 56 80.4
Psat5g134840 Pisum sativum HOM05D000806 ORTHO05D002320 2.6e-16 88.2 60 76.7
HPP92_028392 Vanilla planifolia HOM05D000806 ORTHO05D002320 3.4e-16 87.8 56 78.6
HPP92_028399 Vanilla planifolia HOM05D000806 ORTHO05D002320 3.4e-16 87.8 56 78.6
HPP92_028409 Vanilla planifolia HOM05D000806 ORTHO05D002320 3.4e-16 87.8 56 78.6
CAN.G1012.2 Capsicum annuum HOM05D000806 ORTHO05D002320 4.5e-16 87.4 56 80.4
Lalb_Chr11g0071601 Lupinus albus HOM05D000806 ORTHO05D002320 4.5e-16 87.4 56 80.4
BolSC35t60644H Brassica oleracea HOM05D000806 ORTHO05D002320 5.8e-16 87.0 56 78.6
BolSC35t60752H Brassica oleracea HOM05D000806 ORTHO05D002320 5.8e-16 87.0 56 78.6
BolSC47t61099H Brassica oleracea HOM05D000806 ORTHO05D002320 5.8e-16 87.0 56 78.6
Psat0s1152g0040 Pisum sativum HOM05D000806 ORTHO05D002320 5.8e-16 87.0 60 73.3
SGA_v2.0_scaffold781G53597 Striga asiatica HOM05D000806 ORTHO05D002320 5.8e-16 87.0 56 78.6
arahy.Tifrunner.gnm1.ann1.J4M97S Arachis hypogaea HOM05D000806 ORTHO05D002320 7.6e-16 86.7 56 76.8
Lsat_1_v5_gn_7_98301 Lactuca sativa HOM05D000806 ORTHO05D002320 7.6e-16 86.7 49 87.8
Psat6g140480 Pisum sativum HOM05D000806 ORTHO05D002320 7.6e-16 86.7 60 75.0
Sed0009930 Sechium edule HOM05D000806 ORTHO05D002320 9.9e-16 86.3 51 86.3
AL2G21530 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 1.3e-15 85.9 56 78.6
Gorai.012G151800 Gossypium raimondii HOM05D000806 ORTHO05D002320 1.3e-15 85.9 45 97.8
VMungo0251G1963 Vigna mungo HOM05D000806 ORTHO05D010715 1.3e-15 85.9 56 80.4
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.2e-15 85.1 49 89.8
Hund03831 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.2e-15 85.1 56 75.0
Hund07992 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund08575 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund08809 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund19838 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund22772 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund27485 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund27490 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund27570 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund27599 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund27874 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund27955 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund27977 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28101 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28450 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28473 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28492 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28511 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28624 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28670 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28738 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28748 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund28838 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29142 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29174 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29363 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29462 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29492 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29619 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29637 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29805 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29828 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund29868 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund30328 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund30362 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund30468 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund30508 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund30560 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
Hund30896 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.8e-15 84.3 56 75.0
CAN.G1693.6 Capsicum annuum HOM05D000806 ORTHO05D002320 4.9e-15 84.0 51 84.3
CiPaw.05G175100 Carya illinoinensis HOM05D000806 ORTHO05D002320 4.9e-15 84.0 56 78.6
Psat0s1586g0240 Pisum sativum HOM05D000806 ORTHO05D002320 6.4e-15 83.6 60 71.7
Cpa.g.sc120.42 Carica papaya HOM05D000806 ORTHO05D002320 1.4e-14 82.4 48 87.5
Phvul.002G278116 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 2.4e-14 81.6 56 76.8
Solyc04g039820.3 Solanum lycopersicum HOM05D000806 ORTHO05D002320 3.2e-14 81.3 56 76.8
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 5.5e-14 80.5 48 83.3
Potri.005G150200 Populus trichocarpa HOM05D000806 ORTHO05D002320 5.5e-14 80.5 55 76.4
Hund08023 Selenicereus undatus HOM05D000806 ORTHO05D002320 9.3e-14 79.7 56 69.6
Gorai.003G066100 Gossypium raimondii HOM05D000806 ORTHO05D002320 1.2e-13 79.3 67 73.1
vmacro13611 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 1.2e-13 79.3 60 66.7
Hund01487 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.6e-13 79.0 66 62.1
Hund04050 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.6e-13 79.0 56 69.6
CARHR116860 Cardamine hirsuta HOM05D000806 ORTHO05D002320 2.1e-13 78.6 56 71.4
Cpa.g.sc0.171 Carica papaya HOM05D000806 ORTHO05D002320 2.1e-13 78.6 46 84.8
Gohir.D04G104048 Gossypium hirsutum HOM05D000806 ORTHO05D002320 6.0e-13 77.0 46 82.6
vmacro13610 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 7.9e-13 76.6 60 65.0
SMO364G0525 Selaginella moellendorffii HOM05D000806 ORTHO05D002320 1.3e-12 75.9 57 66.7
Peaxi162Scf00068g00152 Petunia axillaris HOM05D000806 ORTHO05D002320 1.8e-12 75.5 46 80.4
Cc06_g18130 Coffea canephora HOM05D000806 ORTHO05D002320 3.0e-12 74.7 47 83.0
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 3.9e-12 74.3 46 80.4
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 5.1e-12 73.9 60 61.7
Cc07_g17490 Coffea canephora HOM05D000806 ORTHO05D002320 8.7e-12 73.2 49 81.6
EL10Ac4g10120 Beta vulgaris HOM05D000806 ORTHO05D002320 1.9e-11 72.0 40 92.5
Cre12.g484000 Chlamydomonas reinhardtii HOM05D000806 ORTHO05D002320 2.5e-11 71.6 56 66.1
SGA_v2.0_scaffold255G45490 Striga asiatica HOM05D000806 ORTHO05D002320 3.3e-11 71.2 51 72.5
Peaxi162Scf00021g00819 Petunia axillaris HOM05D000806 ORTHO05D002320 4.3e-11 70.9 56 64.3
RcHm_v2.0_Chr6g0281331 Rosa chinensis HOM05D000806 ORTHO05D002320 5.6e-11 70.5 40 90.0
Gorai.004G276900 Gossypium raimondii HOM05D000806 ORTHO05D002320 9.6e-11 69.7 41 80.5
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 9.6e-11 69.7 56 60.7
SEGI_26932 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 9.6e-11 69.7 56 60.7
SEGI_31685 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 9.6e-11 69.7 56 60.7
Lalb_Chr23g0274531 Lupinus albus HOM05D000806 ORTHO05D002320 1.4e-09 65.9 56 66.1
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 2.4e-09 65.1 41 78.0
Phvul.006G066900 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 3.1e-09 64.7 49 71.4
SEGI_26563 Sequoiadendron giganteum HOM05D000540 ORTHO05D002320 9.0e-09 63.2 62 53.2
Nitab4.5_0003644g0090 Nicotiana tabacum HOM05D012120 ORTHO05D014036 2.6e-08 61.6 36 86.1
Nitab4.5_0000016g0440 Nicotiana tabacum HOM05D008601 ORTHO05D010814 3.8e-07 57.8 39 74.4
BcaB01g03056 Brassica carinata HOM05D000806 ORTHO05D002320 4.9e-07 57.4 35 82.9
Oeu028778.1 Olea europaea HOM05D000806 ORTHO05D002320 1.4e-06 55.8 30 93.3


User provided reference genes

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