Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 0.0e+00 1085.5 537 100.0
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 7.9e-289 996.5 537 90.3
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 4.8e-286 987.3 537 89.9
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 4.5e-252 874.4 561 77.7
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 5.0e-251 870.9 535 78.9
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 1.6e-249 865.9 537 78.0
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 3.0e-248 861.7 537 78.8
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.5e-247 859.4 537 79.3
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 2.6e-247 858.6 537 77.8
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 3.3e-247 858.2 537 78.2
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 2.8e-246 855.1 537 78.0
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 3.7e-246 854.7 543 77.3
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 3.7e-246 854.7 538 77.1
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 6.3e-246 854.0 538 77.0
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 2.4e-245 852.0 537 77.5
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 5.3e-245 850.9 536 76.3
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.6e-244 849.4 537 77.5
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 2.2e-243 845.5 536 75.7
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.5e-242 842.8 546 76.4
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 9.4e-242 840.1 544 75.6
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 5.7e-239 830.9 537 76.2
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 4.1e-237 824.7 537 75.2
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 1.2e-236 823.2 538 75.3
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 4.5e-236 821.2 535 74.6
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.0e-235 820.1 539 76.3
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.3e-235 819.7 540 74.3
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.7e-235 819.3 515 78.1
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 2.9e-235 818.5 539 75.0
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.8e-235 818.1 538 75.3
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.9e-234 815.8 540 75.2
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 2.1e-233 812.4 620 67.6
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 1.1e-229 800.0 537 73.9
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 2.4e-229 798.9 537 74.3
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 1.6e-228 796.2 538 74.5
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.0e-228 795.8 572 71.3
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 4.5e-228 794.7 537 73.6
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 2.1e-225 785.8 540 72.0
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 2.1e-225 785.8 537 72.4
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 1.0e-224 783.5 545 71.4
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 6.8e-224 780.8 540 71.9
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 8.9e-224 780.4 545 71.6
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.2e-223 780.0 537 71.5
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.2e-223 780.0 540 72.0
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.5e-223 779.6 539 71.8
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 7.5e-223 777.3 539 72.2
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.2e-222 775.8 539 72.2
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 4.9e-222 774.6 539 72.0
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.4e-221 773.1 536 71.6
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.8e-221 772.7 539 70.7
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.4e-221 772.3 539 72.0
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 3.2e-221 771.9 545 70.8
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 3.2e-221 771.9 539 70.5
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 3.2e-221 771.9 538 71.9
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 4.1e-221 771.5 539 70.5
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 7.0e-221 770.8 538 70.6
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 7.0e-221 770.8 554 70.6
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 4.6e-220 768.1 538 70.8
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 1.3e-219 766.5 486 76.3
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 5.0e-219 764.6 544 70.8
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 8.6e-219 763.8 539 71.8
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 2.5e-218 762.3 542 69.9
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.5e-218 762.3 539 70.3
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 2.5e-218 762.3 539 72.5
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 3.3e-218 761.9 538 71.0
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 2.1e-217 759.2 546 69.8
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 8.0e-217 757.3 543 70.2
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 5.4e-213 744.6 538 70.8
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 3.0e-211 738.8 581 65.1
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 3.0e-211 738.8 581 65.1
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.6e-209 733.0 462 77.7
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 5.8e-207 724.5 543 67.0
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 2.4e-205 719.2 620 62.1
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 1.0e-203 713.8 536 64.9
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.5e-202 709.9 474 74.9
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.4e-199 698.7 491 69.0
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 2.2e-198 696.0 537 66.1
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 6.4e-198 694.5 536 64.6
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.9e-197 693.0 491 68.4
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 3.5e-196 688.7 536 63.6
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.1e-193 679.5 607 60.5
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.2e-193 677.9 539 65.1
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.1e-192 677.2 650 55.4
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 9.9e-191 670.6 600 60.3
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 4.2e-189 665.2 441 75.5
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 4.8e-185 651.7 445 73.3
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 5.1e-179 631.7 460 69.3
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.6e-177 625.5 411 75.4
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 2.9e-174 615.9 537 60.3
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 9.3e-165 584.3 537 57.4
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 6.0e-164 581.6 436 66.7
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 1.0e-163 580.9 548 53.6
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.0e-155 552.7 490 59.4
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 1.5e-146 523.9 367 72.2
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.0e-143 513.5 348 74.7
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.0e-138 496.9 311 79.7
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.3e-134 484.2 509 51.7
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 7.5e-130 468.4 301 76.7
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.2e-129 466.8 881 36.0
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.2e-126 456.8 843 36.3
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.5e-125 454.1 309 73.5
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 5.2e-123 445.7 967 32.3
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 1.1e-120 438.0 285 75.4
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.8e-120 437.2 889 33.7
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.5e-119 432.6 373 60.6
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.9e-117 427.2 958 31.9
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 1.0e-115 421.4 244 82.4
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 8.0e-108 395.2 234 81.6
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.2e-104 383.3 308 63.6
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.0e-90 337.4 267 64.0
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 8.9e-83 312.0 196 78.1
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 2.1e-71 274.2 170 77.6
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 7.8e-71 272.3 292 49.7
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.0e-70 271.9 268 56.0
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.7e-36 157.1 127 64.6
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 3.8e-33 147.1 786 21.2
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.4e-30 138.7 106 68.9
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.7e-20 105.1 250 27.6
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 5.3e-19 100.1 102 52.0
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 2.0e-18 98.2 63 74.6
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.2e-15 89.0 245 27.3
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 1.8e-14 85.1 95 51.6
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 4.0e-14 84.0 333 23.7
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 6.3e-12 76.6 52 78.8
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 2.2e-09 68.2 42 71.4
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 9.4e-08 62.8 39 76.9


User provided reference genes

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