Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0306311 Helianthus annuus HOM05D001068 ORTHO05D003875 7.3e-104 380.6 192 100.0
HanXRQChr16g0501091 Helianthus annuus HOM05D001068 ORTHO05D003875 7.7e-21 104.8 151 49.0
Lsat_1_v5_gn_6_18061 Lactuca sativa HOM05D001068 ORTHO05D003875 9.5e-19 97.8 143 47.6
ECA233G2258 Erigeron canadensis HOM05D001068 ORTHO05D003875 8.0e-18 94.7 143 49.0
QL12p011360 Quercus lobata HOM05D001068 ORTHO05D003875 4.9e-15 85.5 142 43.7
HPP92_022429 Vanilla planifolia HOM05D001068 ORTHO05D003875 6.3e-15 85.1 133 41.4
CiPaw.11G081900 Carya illinoinensis HOM05D001068 ORTHO05D003875 1.1e-14 84.3 143 42.0
Dinv39171 Davidia involucrata HOM05D001068 ORTHO05D003875 4.1e-14 82.4 133 42.1
Lalb_Chr09g0329981 Lupinus albus HOM05D001068 ORTHO05D003875 5.4e-14 82.0 142 42.3
Os06g0103500 Oryza sativa ssp. japonica HOM05D001068 ORTHO05D003875 5.4e-14 82.0 137 43.1
Duzib068G1125 Durio zibethinus HOM05D001068 ORTHO05D003875 7.0e-14 81.6 133 42.9
Rhsim11G0003700 Rhododendron simsii HOM05D001068 ORTHO05D003875 7.0e-14 81.6 133 42.9
Sabra01G0125200 Salix brachista HOM05D001068 ORTHO05D003875 7.0e-14 81.6 140 41.4
Thecc.03G247900 Theobroma cacao HOM05D001068 ORTHO05D003875 7.0e-14 81.6 133 41.4
Actinidia14405 Actinidia chinensis HOM05D001068 ORTHO05D003875 9.2e-14 81.3 140 41.4
CAN.G1178.15 Capsicum annuum HOM05D001068 ORTHO05D003875 9.2e-14 81.3 133 41.4
Ciclev10019196m.g Citrus clementina HOM05D001068 ORTHO05D003875 9.2e-14 81.3 142 42.3
Gohir.A12G215400 Gossypium hirsutum HOM05D001068 ORTHO05D003875 9.2e-14 81.3 135 43.0
Gohir.D12G218000 Gossypium hirsutum HOM05D001068 ORTHO05D003875 9.2e-14 81.3 135 43.0
Gorai.008G233600 Gossypium raimondii HOM05D001068 ORTHO05D003875 9.2e-14 81.3 135 43.0
Aqoxy3G02817 Aquilegia oxysepala HOM05D001068 ORTHO05D003875 1.2e-13 80.9 133 42.9
Peaxi162Scf00214g00048 Petunia axillaris HOM05D001068 ORTHO05D003875 1.2e-13 80.9 133 41.4
TWI81G0453 Tripterygium wilfordii HOM05D001068 ORTHO05D003875 1.2e-13 80.9 143 42.0
Zm00001eb379490 Zea mays HOM05D001068 ORTHO05D003875 1.2e-13 80.9 133 42.1
Psat2g176520 Pisum sativum HOM05D001068 ORTHO05D003875 1.6e-13 80.5 146 40.4
vmacro00007 Vaccinium macrocarpon HOM05D001068 ORTHO05D003875 1.6e-13 80.5 133 40.6
VMungo1215G1615 Vigna mungo HOM05D001068 ORTHO05D003875 1.6e-13 80.5 133 39.8
COL.COLO4_37120 Corchorus olitorius HOM05D001068 ORTHO05D003875 2.0e-13 80.1 133 39.8
ECA233G3500 Erigeron canadensis HOM05D001068 ORTHO05D003875 2.0e-13 80.1 147 42.9
Gohir.A11G027400 Gossypium hirsutum HOM05D001068 ORTHO05D003875 2.0e-13 80.1 133 41.4
Gorai.007G028900 Gossypium raimondii HOM05D001068 ORTHO05D003875 2.0e-13 80.1 133 41.4
Lj8A269T38 Lonicera japonica HOM05D001068 ORTHO05D003875 2.0e-13 80.1 143 41.3
Nitab4.5_0001381g0040 Nicotiana tabacum HOM05D001068 ORTHO05D003875 2.0e-13 80.1 133 41.4
ATR0057G009 Amborella trichopoda HOM05D001068 ORTHO05D003875 2.7e-13 79.7 140 41.4
arahy.Tifrunner.gnm1.ann1.MWEA9C Arachis hypogaea HOM05D001068 ORTHO05D003875 2.7e-13 79.7 140 41.4
arahy.Tifrunner.gnm1.ann1.QXG3RX Arachis hypogaea HOM05D001068 ORTHO05D003875 2.7e-13 79.7 140 41.4
Duzib084G1186 Durio zibethinus HOM05D001068 ORTHO05D003875 2.7e-13 79.7 133 41.4
CDE02G3830 Ceratophyllum demersum HOM05D001068 ORTHO05D003875 3.5e-13 79.3 133 39.1
Duzib205G0096 Durio zibethinus HOM05D001068 ORTHO05D003875 3.5e-13 79.3 133 40.6
Gohir.D11G026600 Gossypium hirsutum HOM05D001068 ORTHO05D003875 4.5e-13 79.0 133 40.6
Medtr4g100640 Medicago truncatula HOM05D001068 ORTHO05D003875 4.5e-13 79.0 133 41.4
Hund28547 Selenicereus undatus HOM05D001068 ORTHO05D003875 4.5e-13 79.0 140 41.4
Hund28548 Selenicereus undatus HOM05D001068 ORTHO05D003875 4.5e-13 79.0 140 41.4
TPR.G37610 Trifolium pratense HOM05D001068 ORTHO05D003875 4.5e-13 79.0 133 40.6
Atru.chr9.1272 Acer truncatum HOM05D001068 ORTHO05D003875 5.9e-13 78.6 140 40.0
CSS0023687 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 5.9e-13 78.6 133 40.6
Manes.02G041600 Manihot esculenta HOM05D001068 ORTHO05D003875 5.9e-13 78.6 133 39.8
Nn6g33873 Nelumbo nucifera HOM05D001068 ORTHO05D003875 5.9e-13 78.6 133 41.4
Nitab4.5_0003050g0030 Nicotiana tabacum HOM05D001068 ORTHO05D003875 5.9e-13 78.6 133 40.6
PSO063G6720 Papaver somniferum HOM05D001068 ORTHO05D003875 5.9e-13 78.6 140 40.7
Potri.001G155500 Populus trichocarpa HOM05D001068 ORTHO05D003875 5.9e-13 78.6 140 41.4
Sopen08g026880 Solanum pennellii HOM05D001068 ORTHO05D003875 5.9e-13 78.6 133 42.1
arahy.Tifrunner.gnm1.ann1.I9A8PV Arachis hypogaea HOM05D001068 ORTHO05D003875 7.8e-13 78.2 133 42.1
arahy.Tifrunner.gnm1.ann1.ZPM9RR Arachis hypogaea HOM05D001068 ORTHO05D003875 7.8e-13 78.2 133 42.1
CSS0004981 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 7.8e-13 78.2 133 39.1
CiPaw.12G050100 Carya illinoinensis HOM05D001068 ORTHO05D003875 7.8e-13 78.2 140 40.0
Manes.01G083700 Manihot esculenta HOM05D001068 ORTHO05D003875 7.8e-13 78.2 136 39.0
VMungo0251G0971 Vigna mungo HOM05D001068 ORTHO05D003875 7.8e-13 78.2 143 39.9
Cfa012691 Carpinus fangiana HOM05D001068 ORTHO05D003875 1.0e-12 77.8 142 41.5
Haze_07942 Corylus avellana HOM05D001068 ORTHO05D003875 1.0e-12 77.8 142 41.5
Phvul.002G056700 Phaseolus vulgaris HOM05D001068 ORTHO05D003875 1.0e-12 77.8 133 38.3
Sc22g0001000 Simmondsia chinensis HOM05D001068 ORTHO05D003875 1.0e-12 77.8 140 40.7
PGSC0003DMG400004828 Solanum tuberosum HOM05D001068 ORTHO05D003875 1.0e-12 77.8 133 41.4
SGA_v2.0_scaffold199G41219 Striga asiatica HOM05D001068 ORTHO05D003875 1.0e-12 77.8 133 42.1
THA.LOC104815504 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 1.0e-12 77.8 137 40.1
Zm00001eb376020 Zea mays HOM05D001068 ORTHO05D003875 1.0e-12 77.8 136 39.7
HanXRQChr08g0227741 Helianthus annuus HOM05D001068 ORTHO05D003875 1.3e-12 77.4 143 41.3
BcaC01g05713 Brassica carinata HOM05D001068 ORTHO05D003875 1.7e-12 77.0 156 37.8
C03p22930 Brassica napus HOM05D001068 ORTHO05D003875 1.7e-12 77.0 156 37.8
BolC3t14694H Brassica oleracea HOM05D001068 ORTHO05D003875 1.7e-12 77.0 156 37.8
CANSAT21G1427 Cannabis sativa HOM05D001068 ORTHO05D003875 1.7e-12 77.0 133 39.8
Thhalv10016360m.g Eutrema salsugineum HOM05D001068 ORTHO05D003875 1.7e-12 77.0 138 38.4
BcaC09g50411 Brassica carinata HOM05D001068 ORTHO05D003875 2.3e-12 76.6 144 39.6
A01p20470 Brassica napus HOM05D001068 ORTHO05D003875 2.3e-12 76.6 144 39.6
C01p25740 Brassica napus HOM05D001068 ORTHO05D003875 2.3e-12 76.6 144 39.6
BolC1t02524H Brassica oleracea HOM05D001068 ORTHO05D003875 2.3e-12 76.6 144 39.6
BraA01t01975Z Brassica rapa HOM05D001068 ORTHO05D003875 2.3e-12 76.6 144 39.6
Ca_21989_v3 Cicer arietinum L. HOM05D001068 ORTHO05D003875 2.3e-12 76.6 140 40.7
Ca_30457_v3 Cicer arietinum L. HOM05D001068 ORTHO05D003875 2.3e-12 76.6 140 40.7
Thhalv10024621m.g Eutrema salsugineum HOM05D001068 ORTHO05D003875 2.3e-12 76.6 144 39.6
Gohir.D09G191100 Gossypium hirsutum HOM05D001068 ORTHO05D003875 2.3e-12 76.6 138 40.6
Gorai.006G213900 Gossypium raimondii HOM05D001068 ORTHO05D003875 2.3e-12 76.6 138 40.6
Lj2g0000811 Lotus japonicus HOM05D001068 ORTHO05D003875 2.3e-12 76.6 140 38.6
Potri.003G079200 Populus trichocarpa HOM05D001068 ORTHO05D003875 2.3e-12 76.6 140 40.7
Sabra01G0125000 Salix brachista HOM05D001068 ORTHO05D003875 2.3e-12 76.6 134 41.0
Lalb_Chr16g0386611 Lupinus albus HOM05D001068 ORTHO05D003875 2.9e-12 76.3 133 40.6
PSO782G5462 Papaver somniferum HOM05D001068 ORTHO05D003875 2.9e-12 76.3 140 40.0
Phvul.003G222800 Phaseolus vulgaris HOM05D001068 ORTHO05D003875 2.9e-12 76.3 140 39.3
Solyc08g078400.3 Solanum lycopersicum HOM05D001068 ORTHO05D003875 2.9e-12 76.3 133 42.9
Sopen08g026890 Solanum pennellii HOM05D001068 ORTHO05D003875 2.9e-12 76.3 133 42.9
Aa31LG2G12940 Aethionema arabicum HOM05D001068 ORTHO05D003875 3.8e-12 75.9 138 39.9
Cc08_g12140 Coffea canephora HOM05D001068 ORTHO05D003875 3.8e-12 75.9 143 40.6
DCAR_008508 Daucus carota HOM05D001068 ORTHO05D003875 3.8e-12 75.9 135 41.5
Glyma.01G207500 Glycine max HOM05D001068 ORTHO05D003875 3.8e-12 75.9 140 38.6
A03p19670 Brassica napus HOM05D001068 ORTHO05D003875 5.0e-12 75.5 159 37.1
Cpa.g.sc89.71 Carica papaya HOM05D001068 ORTHO05D003875 5.0e-12 75.5 140 40.7
Glyma.05G062200 Glycine max HOM05D001068 ORTHO05D003875 5.0e-12 75.5 140 39.3
Psat4g072960 Pisum sativum HOM05D001068 ORTHO05D003875 5.0e-12 75.5 143 38.5
Prupe.5G065100 Prunus persica HOM05D001068 ORTHO05D003875 5.0e-12 75.5 133 41.4
PGSC0003DMG400004827 Solanum tuberosum HOM05D001068 ORTHO05D003875 5.0e-12 75.5 133 42.9
TWI15G0242 Tripterygium wilfordii HOM05D001068 ORTHO05D003875 5.0e-12 75.5 133 39.8
MSTRG.12124 Avicennia marina HOM05D001068 ORTHO05D003875 6.6e-12 75.1 143 40.6
FAN13G2133 Fragaria x ananassa HOM05D001068 ORTHO05D003875 6.6e-12 75.1 133 41.4
Gohir.A09G196500 Gossypium hirsutum HOM05D001068 ORTHO05D003875 6.6e-12 75.1 138 39.9
Sp7g17360 Schrenkiella parvula HOM05D001068 ORTHO05D003875 6.6e-12 75.1 138 39.1
TPR.G18112 Trifolium pratense HOM05D001068 ORTHO05D003875 6.6e-12 75.1 133 39.8
AL4G31770 Arabidopsis lyrata HOM05D001068 ORTHO05D003875 8.6e-12 74.7 151 37.1
AL575U10010 Arabidopsis lyrata HOM05D001068 ORTHO05D003875 8.6e-12 74.7 151 37.1
Sabra03G0049400 Salix brachista HOM05D001068 ORTHO05D003875 8.6e-12 74.7 140 40.7
AT2G35690 Arabidopsis thaliana HOM05D001068 ORTHO05D003875 1.1e-11 74.3 154 37.0
BcaNung00152 Brassica carinata HOM05D001068 ORTHO05D003875 1.1e-11 74.3 144 37.5
Eucgr.E00406 Eucalyptus grandis HOM05D001068 ORTHO05D003875 1.1e-11 74.3 140 40.7
Glyma.11G035200 Glycine max HOM05D001068 ORTHO05D003875 1.1e-11 74.3 140 38.6
Lj4g0020838 Lotus japonicus HOM05D001068 ORTHO05D003875 1.1e-11 74.3 133 39.1
Sed0021431 Sechium edule HOM05D001068 ORTHO05D003875 1.5e-11 73.9 153 38.6
THA.LOC104814467 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 1.5e-11 73.9 134 41.0
Ah.12g054350 Amaranthus hybridus HOM05D001068 ORTHO05D003875 1.9e-11 73.6 133 40.6
BraA03t11221Z Brassica rapa HOM05D001068 ORTHO05D003875 1.9e-11 73.6 159 36.5
Medtr5g012920 Medicago truncatula HOM05D001068 ORTHO05D003875 1.9e-11 73.6 140 37.1
Oeu040705.1 Olea europaea HOM05D001068 ORTHO05D003875 1.9e-11 73.6 142 38.7
RcHm_v2.0_Chr7g0204041 Rosa chinensis HOM05D001068 ORTHO05D003875 1.9e-11 73.6 137 40.9
SalBow6G3759 Salvia bowleyana HOM05D001068 ORTHO05D003875 1.9e-11 73.6 146 37.7
BolC6t35390H Brassica oleracea HOM05D001068 ORTHO05D003875 2.5e-11 73.2 156 36.5
AUR62007112 Chenopodium quinoa HOM05D001068 ORTHO05D003875 2.5e-11 73.2 133 39.8
FvH4_5g19470 Fragaria vesca HOM05D001068 ORTHO05D003875 2.5e-11 73.2 133 40.6
Lalb_Chr05g0221141 Lupinus albus HOM05D001068 ORTHO05D003875 2.5e-11 73.2 140 37.9
Prupe.7G067100 Prunus persica HOM05D001068 ORTHO05D003875 2.5e-11 73.2 140 37.1
Hund14578 Selenicereus undatus HOM05D001068 ORTHO05D003875 2.5e-11 73.2 133 39.8
TAR629G1427 Trochodendron aralioides HOM05D001068 ORTHO05D003875 2.5e-11 73.2 133 37.6
Carub.0004s1742 Capsella rubella HOM05D001068 ORTHO05D003875 3.3e-11 72.8 151 36.4
MELO3C005515.2 Cucumis melo HOM05D001068 ORTHO05D003875 3.3e-11 72.8 145 38.6
THA.LOC104812770 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 3.3e-11 72.8 138 37.0
AT4G16760 Arabidopsis thaliana HOM05D001068 ORTHO05D003875 4.3e-11 72.4 142 39.4
BcaB01g03886 Brassica carinata HOM05D001068 ORTHO05D003875 4.3e-11 72.4 156 36.5
ClCG01G004240 Citrullus lanatus HOM05D001068 ORTHO05D003875 4.3e-11 72.4 145 39.3
CsaV3_5G004440 Cucumis sativus L. HOM05D001068 ORTHO05D003875 4.3e-11 72.4 145 38.6
AL7G37930 Arabidopsis lyrata HOM05D001068 ORTHO05D003875 5.6e-11 72.0 142 38.0
Carub.0007s2462 Capsella rubella HOM05D001068 ORTHO05D003875 5.6e-11 72.0 142 38.7
PGR042G1327 Punica granatum HOM05D001068 ORTHO05D003875 5.6e-11 72.0 140 37.9
Ah.07g198830 Amaranthus hybridus HOM05D001068 ORTHO05D003875 7.3e-11 71.6 133 39.8
Hma1.2p1_0316F.1_g122820 Hydrangea macrophylla HOM05D001068 ORTHO05D003875 7.3e-11 71.6 151 37.7
Ca_24593_v3 Cicer arietinum L. HOM05D001068 ORTHO05D003875 9.5e-11 71.2 133 36.8
Lalb_Chr05g0214351 Lupinus albus HOM05D001068 ORTHO05D003875 9.5e-11 71.2 140 37.9
MD04G1060500 Malus domestica HOM05D001068 ORTHO05D003875 9.5e-11 71.2 133 37.6
Migut.A01136 Erythranthe guttata HOM05D001068 ORTHO05D003875 1.2e-10 70.9 133 37.6
Glyma.17G144051 Glycine max HOM05D001068 ORTHO05D003875 1.2e-10 70.9 140 37.9
EL10Ac5g12342 Beta vulgaris HOM05D001068 ORTHO05D003875 2.1e-10 70.1 140 40.0
AUR62019981 Chenopodium quinoa HOM05D001068 ORTHO05D003875 2.1e-10 70.1 133 39.1
Sp4g17950 Schrenkiella parvula HOM05D001068 ORTHO05D003875 2.1e-10 70.1 154 37.7
Hma1.2p1_1136F.1_g260540 Hydrangea macrophylla HOM05D001068 ORTHO05D003875 2.8e-10 69.7 142 37.3
MD13G1127300 Malus domestica HOM05D001068 ORTHO05D003875 2.8e-10 69.7 133 37.6
FAN18G2254 Fragaria x ananassa HOM05D001068 ORTHO05D003875 4.7e-10 68.9 143 35.0
FAN18G3422 Fragaria x ananassa HOM05D001068 ORTHO05D003875 4.7e-10 68.9 143 35.0
FAN18G4353 Fragaria x ananassa HOM05D001068 ORTHO05D003875 4.7e-10 68.9 143 35.0
Lalb_Chr05g0214331 Lupinus albus HOM05D001068 ORTHO05D003875 4.7e-10 68.9 132 37.9
THA.LOC104806669 Tarenaya hassleriana HOM05D001068 ORTHO05D003875 8.0e-10 68.2 148 37.8
FAN04G2918 Fragaria x ananassa HOM05D001068 ORTHO05D003875 1.0e-09 67.8 143 35.0
TPR.G18124 Trifolium pratense HOM05D001068 ORTHO05D003875 1.0e-09 67.8 121 38.0
CARHR223330 Cardamine hirsuta HOM05D001068 ORTHO05D003875 1.4e-09 67.4 136 36.8
DCAR_027764 Daucus carota HOM05D001068 ORTHO05D003875 2.3e-09 66.6 133 39.1
Pp3c14_14860 Physcomitrium patens HOM05D001068 ORTHO05D003875 2.3e-09 66.6 146 34.9
unitig_8.g3019 Utricularia gibba HOM05D001068 ORTHO05D003875 3.1e-09 66.2 110 41.8
CSS0035524 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 5.2e-09 65.5 115 40.0
Dinv21659 Davidia involucrata HOM05D001068 ORTHO05D003875 6.8e-09 65.1 151 35.8
SMO358G0542 Selaginella moellendorffii HOM05D001068 ORTHO05D003875 8.9e-09 64.7 136 34.6
Sed0012317 Sechium edule HOM05D001068 ORTHO05D003875 1.5e-08 63.9 142 35.9
FAN08G3629 Fragaria x ananassa HOM05D001068 ORTHO05D003875 2.0e-08 63.5 143 33.6
Mapoly0169s0009 Marchantia polymorpha HOM05D001068 ORTHO05D003875 2.0e-08 63.5 143 35.7
RcHm_v2.0_Chr3g0481201 Rosa chinensis HOM05D001068 ORTHO05D003875 2.0e-08 63.5 133 36.8
Nitab4.5_0002289g0160 Nicotiana tabacum HOM05D001068 ORTHO05D021508 5.8e-08 62.0 84 41.7
DCAR_004991 Daucus carota HOM05D001068 ORTHO05D003875 9.8e-08 61.2 133 34.6
RcHm_v2.0_Chr3g0481221 Rosa chinensis HOM05D001068 ORTHO05D003875 2.9e-07 59.7 133 35.3
Glyma.14G125300 Glycine max HOM05D001068 ORTHO05D003875 3.2e-06 56.2 69 44.9


User provided reference genes

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