Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0305081 Helianthus annuus HOM05D003498 ORTHO05D004191 2.6e-49 198.4 97 100.0
HanXRQChr05g0130941 Helianthus annuus HOM05D003498 ORTHO05D004191 6.4e-32 140.6 71 95.8
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 1.8e-10 69.3 39 79.5
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 2.4e-10 68.9 39 79.5
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 2.4e-10 68.9 39 79.5
HanXRQChr05g0138221 Helianthus annuus HOM05D003498 ORTHO05D004191 9.0e-10 67.0 39 76.9
HanXRQChr05g0142761 Helianthus annuus HOM05D003498 ORTHO05D004191 9.0e-10 67.0 39 76.9
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 1.2e-09 66.6 39 76.9
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.5e-09 66.2 39 76.9
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 2.6e-09 65.5 39 76.9
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
AUR62003275 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
AUR62042316 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.4e-09 65.1 36 80.6
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 3.4e-09 65.1 39 74.4
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 4.5e-09 64.7 39 74.4
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 4.5e-09 64.7 39 74.4
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 4.5e-09 64.7 39 74.4
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 5.9e-09 64.3 39 74.4
AUR62007665 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.9e-09 64.3 36 80.6
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 5.9e-09 64.3 57 57.9
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 5.9e-09 64.3 39 74.4
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 5.9e-09 64.3 39 74.4
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 5.9e-09 64.3 36 80.6
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 7.6e-09 63.9 39 74.4
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 7.6e-09 63.9 39 74.4
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 7.6e-09 63.9 39 74.4
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 7.6e-09 63.9 39 74.4
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 7.6e-09 63.9 39 74.4
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 7.6e-09 63.9 39 74.4
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 1.0e-08 63.5 39 74.4
AUR62033715 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.0e-08 63.5 39 71.8
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 1.0e-08 63.5 39 71.8
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 1.0e-08 63.5 39 74.4
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 1.0e-08 63.5 39 74.4
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 1.0e-08 63.5 39 74.4
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 1.3e-08 63.2 39 71.8
Haze_21315 Corylus avellana HOM05D003498 ORTHO05D004191 1.3e-08 63.2 39 74.4
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 1.3e-08 63.2 39 74.4
AUR62025775 Chenopodium quinoa HOM05D003498 ORTHO05D018212 1.7e-08 62.8 36 77.8
AUR62042988 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 71.8
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 74.4
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 71.8
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.7e-08 62.8 36 80.6
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 71.8
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 71.8
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 71.8
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 71.8
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 71.8
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 74.4
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 1.7e-08 62.8 39 74.4
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 2.2e-08 62.4 39 71.8
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 2.2e-08 62.4 39 71.8
AUR62020308 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.2e-08 62.4 36 77.8
AUR62022230 Chenopodium quinoa HOM05D003498 ORTHO05D000001 2.2e-08 62.4 35 80.0
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 2.2e-08 62.4 39 71.8
Actinidia38210 Actinidia chinensis HOM05D003498 ORTHO05D004191 2.9e-08 62.0 44 61.4
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 71.8
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 71.8
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 2.9e-08 62.0 39 71.8
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 2.9e-08 62.0 39 71.8
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 2.9e-08 62.0 39 71.8
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 71.8
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 71.8
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 2.9e-08 62.0 57 52.6
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 69.2
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 71.8
Medtr0271s0010 Medicago truncatula HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 74.4
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 2.9e-08 62.0 39 71.8
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 3.8e-08 61.6 39 71.8
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 3.8e-08 61.6 39 71.8
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 3.8e-08 61.6 39 69.2
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 3.8e-08 61.6 39 71.8
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 3.8e-08 61.6 39 71.8
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 3.8e-08 61.6 39 71.8
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 3.8e-08 61.6 39 71.8
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 69.2
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 69.2
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 69.2
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 66.7
AUR62036945 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.0e-08 61.2 36 77.8
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 5.0e-08 61.2 36 77.8
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 5.0e-08 61.2 35 77.1
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 5.0e-08 61.2 35 77.1
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 69.2
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 69.2
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 5.0e-08 61.2 44 63.6
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 71.8
QL02p008646 Quercus lobata HOM05D003498 ORTHO05D004191 5.0e-08 61.2 42 69.0
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 69.2
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 71.8
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 5.0e-08 61.2 39 69.2
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 6.5e-08 60.8 38 73.7
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 71.8
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 69.2
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 69.2
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 71.8
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 66.7
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 69.2
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 69.2
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 6.5e-08 60.8 39 69.2
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 71.8
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 71.8
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 71.8
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 71.8
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 69.2
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 69.2
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 69.2
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 71.8
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 69.2
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 8.5e-08 60.5 39 69.2
Nn3g16542 Nelumbo nucifera HOM05D003498 ORTHO05D004191 1.1e-07 60.1 39 69.2
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 1.1e-07 60.1 39 69.2
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 1.1e-07 60.1 39 69.2
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 1.1e-07 60.1 36 75.0
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 69.2
CSS0002226 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 66.7
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 66.7
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 66.7
CSS0030890 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 66.7
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 66.7
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 66.7
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.4e-07 59.7 36 75.0
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 69.2
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 1.4e-07 59.7 39 69.2
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 1.9e-07 59.3 39 66.7
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 1.9e-07 59.3 39 69.2
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 1.9e-07 59.3 39 69.2
Atru.chr6.2501 Acer truncatum HOM05D003498 ORTHO05D004191 2.5e-07 58.9 39 69.2
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 2.5e-07 58.9 39 69.2
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 2.5e-07 58.9 39 66.7
HanXRQChr14g0428161 Helianthus annuus HOM05D003498 ORTHO05D004191 2.5e-07 58.9 37 73.0
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 3.2e-07 58.5 39 69.2
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 3.2e-07 58.5 36 75.0
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 3.2e-07 58.5 39 66.7
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 3.2e-07 58.5 36 72.2
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 3.2e-07 58.5 39 66.7
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 3.2e-07 58.5 44 63.6
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 4.2e-07 58.2 43 62.8
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 5.5e-07 57.8 39 66.7
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 5.5e-07 57.8 39 66.7
vmacro18322 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 7.2e-07 57.4 47 61.7
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 9.3e-07 57.0 36 69.4
CSS0025632 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.2e-06 56.6 45 55.6
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 1.2e-06 56.6 36 72.2
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 1.6e-06 56.2 36 72.2
Aqoxy51s003 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 2.1e-06 55.8 32 75.0
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 2.1e-06 55.8 32 78.1
Manes.06G007550 Manihot esculenta HOM05D003498 ORTHO05D004191 3.6e-06 55.1 32 75.0
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 4.6e-06 54.7 36 69.4
TPR.G22201 Trifolium pratense HOM05D003498 ORTHO05D004191 6.1e-06 54.3 31 71.0
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 7.9e-06 53.9 39 61.5


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