Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 4.7e-55 217.6 110 100.0
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 1.5e-45 186.0 109 84.4
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 1.5e-45 186.0 109 84.4
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.0e-41 173.3 109 79.8
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 2.1e-34 149.1 113 66.4
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.0e-33 146.7 109 67.9
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.3e-33 146.4 110 69.1
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 5.0e-33 144.4 110 67.3
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 5.0e-33 144.4 110 67.3
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 5.0e-33 144.4 110 67.3
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.0e-33 144.4 110 66.4
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.0e-33 144.4 110 66.4
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 5.0e-33 144.4 110 67.3
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 8.6e-33 143.7 110 66.4
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 1.5e-32 142.9 110 66.4
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 7.3e-32 140.6 110 65.5
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 9.5e-32 140.2 109 65.1
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 9.5e-32 140.2 110 65.5
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.6e-31 139.4 110 65.5
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.6e-31 139.4 87 80.5
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.7e-31 137.9 110 62.7
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.7e-31 137.9 110 62.7
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 2.3e-30 135.6 110 61.8
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 2.3e-30 135.6 110 61.8
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 2.3e-30 135.6 110 61.8
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 2.3e-30 135.6 110 61.8
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 2.3e-30 135.6 110 61.8
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 2.3e-30 135.6 110 61.8
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 3.1e-30 135.2 110 63.6
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 2.6e-29 132.1 110 64.5
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 2.6e-29 132.1 110 64.5
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 2.6e-29 132.1 110 64.5
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 2.6e-29 132.1 110 64.5
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 2.6e-29 132.1 110 64.5
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 9.9e-29 130.2 110 61.8
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 9.9e-29 130.2 110 61.8
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 9.9e-29 130.2 110 61.8
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 9.9e-29 130.2 110 61.8
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 6.4e-28 127.5 110 60.9
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.2e-27 123.6 111 58.6
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 9.2e-27 123.6 110 60.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.1e-26 122.5 110 59.1
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 7.8e-26 120.6 110 61.8
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 8.6e-25 117.1 114 56.1
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.6e-25 117.1 110 58.2
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.3e-24 115.2 109 55.0
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 4.3e-24 114.8 94 63.8
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 7.3e-24 114.0 110 57.3
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 7.6e-21 104.0 72 69.4
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.9e-20 101.3 89 57.3
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 1.9e-19 99.4 106 51.9
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 3.2e-19 98.6 88 59.1
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 4.1e-19 98.2 92 57.6
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.2e-19 97.1 110 50.0
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 8.7e-17 90.5 112 43.8
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.3e-16 88.6 72 59.7
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 8.1e-15 84.0 112 40.2
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.4e-14 83.2 50 76.0
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 3.1e-14 82.0 70 61.4
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 4.0e-14 81.6 49 73.5
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.3e-08 62.0 61 50.8
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 7.3e-08 60.8 59 59.3
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 7.3e-08 60.8 61 54.1
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.1e-06 57.0 59 55.9
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.1e-06 55.5 82 39.0
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 4.0e-06 55.1 61 52.5


User provided reference genes

Program Settings