Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0270771 Helianthus annuus HOM05D003625 ORTHO05D004382 1.5e-68 262.7 130 100.0
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 1.6e-14 83.2 101 41.6
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 2.8e-14 82.4 101 40.6
Lsat_1_v5_gn_8_55721 Lactuca sativa HOM05D003625 ORTHO05D004382 1.4e-13 80.1 101 40.6
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 1.5e-12 76.6 89 42.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 4.9e-11 71.6 94 41.5
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 1.1e-10 70.5 96 39.6
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 3.2e-10 68.9 95 41.1
CSS0019256 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 7.1e-10 67.8 94 41.5
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 9.3e-10 67.4 94 38.3
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 1.2e-09 67.0 93 38.7
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 4.6e-09 65.1 93 38.7
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 7.8e-09 64.3 94 38.3
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 1.0e-08 63.9 94 40.4
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 1.0e-08 63.9 94 40.4
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 1.0e-08 63.9 94 40.4
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 1.0e-08 63.9 97 34.0
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 1.3e-08 63.5 93 39.8
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 1.7e-08 63.2 95 41.1
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 1.7e-08 63.2 94 38.3
HanXRQChr12g0370811 Helianthus annuus HOM05D003625 ORTHO05D004382 2.3e-08 62.8 57 54.4
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 3.9e-08 62.0 97 35.1
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 3.9e-08 62.0 102 36.3
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 5.1e-08 61.6 91 36.3
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 1.1e-07 60.5 92 38.0
DCAR_002782 Daucus carota HOM05D003625 ORTHO05D004382 1.1e-07 60.5 93 37.6
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 1.9e-07 59.7 94 37.2
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 1.9e-07 59.7 95 38.9
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 2.5e-07 59.3 93 35.5
Haze_04796 Corylus avellana HOM05D003625 ORTHO05D004382 2.5e-07 59.3 94 35.1
Sc17g0003670 Simmondsia chinensis HOM05D003625 ORTHO05D004382 2.5e-07 59.3 89 37.1
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 3.3e-07 58.9 94 35.1
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 3.3e-07 58.9 94 33.0
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 3.3e-07 58.9 94 33.0
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 3.3e-07 58.9 90 37.8
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 3.3e-07 58.9 96 38.5
Potri.002G213400 Populus trichocarpa HOM05D003625 ORTHO05D004382 4.3e-07 58.5 93 33.3
Sabra02G0149300 Salix brachista HOM05D003625 ORTHO05D004382 4.3e-07 58.5 93 33.3
Haze_24021 Corylus avellana HOM05D003625 ORTHO05D004382 5.6e-07 58.2 94 37.2
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 5.6e-07 58.2 93 32.3
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 5.6e-07 58.2 93 34.4
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 7.3e-07 57.8 93 32.3
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 7.3e-07 57.8 94 36.2
DCAR_005834 Daucus carota HOM05D003625 ORTHO05D004382 9.6e-07 57.4 93 36.6
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 1.3e-06 57.0 94 35.1
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.3e-06 57.0 93 33.3
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.3e-06 57.0 93 34.4
SHI14627 Sapria himalayana HOM05D003625 ORTHO05D004382 1.3e-06 57.0 93 35.5
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.6e-06 56.6 96 34.4
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 2.1e-06 56.2 94 36.2
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 2.1e-06 56.2 94 36.2
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 2.8e-06 55.8 94 31.9
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 3.6e-06 55.5 94 36.2
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 3.6e-06 55.5 94 36.2
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 3.6e-06 55.5 101 31.7
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 3.6e-06 55.5 93 32.3
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 6.2e-06 54.7 93 34.4
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 6.2e-06 54.7 103 35.0


User provided reference genes

Program Settings