Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0268691 Helianthus annuus HOM05D004715 ORTHO05D005644 2.0e-49 198.7 99 100.0
Hma1.2p1_1398F.1_g280805 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 4.1e-10 68.2 49 69.4
Hma1.2p1_1398F.1_g280810 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 4.1e-10 68.2 49 69.4
Hma1.2p1_0317F.1_g123670 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 5.4e-10 67.8 49 69.4
Hma1.2p1_1398F.1_g280822 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 5.4e-10 67.8 49 69.4
Lj5A69G39 Lonicera japonica HOM05D004715 ORTHO05D005644 7.1e-10 67.4 49 67.3
Oeu063807.1 Olea europaea HOM05D004715 ORTHO05D005644 1.2e-09 66.6 49 63.3
Peaxi162Scf00125g00003 Petunia axillaris HOM05D004715 ORTHO05D005644 1.2e-09 66.6 51 60.8
DCAR_025488 Daucus carota HOM05D004715 ORTHO05D005644 1.6e-09 66.2 49 67.3
Lsat_1_v5_gn_5_132400 Lactuca sativa HOM05D004715 ORTHO05D005644 1.6e-09 66.2 49 67.3
Nitab4.5_0006709g0030 Nicotiana tabacum HOM05D004715 ORTHO05D005644 1.6e-09 66.2 49 65.3
Oeu052278.1 Olea europaea HOM05D004715 ORTHO05D005644 1.6e-09 66.2 49 63.3
Peaxi162Scf01195g00016 Petunia axillaris HOM05D004715 ORTHO05D005644 2.1e-09 65.9 49 63.3
Rhsim03G0101400 Rhododendron simsii HOM05D004715 ORTHO05D005644 2.1e-09 65.9 50 62.0
CAN.G1830.13 Capsicum annuum HOM05D004715 ORTHO05D005644 2.7e-09 65.5 49 63.3
HanXRQChr15g0463891 Helianthus annuus HOM05D004715 ORTHO05D005644 2.7e-09 65.5 49 63.3
Nitab4.5_0004281g0110 Nicotiana tabacum HOM05D004715 ORTHO05D005644 2.7e-09 65.5 49 63.3
Solyc09g008630.3 Solanum lycopersicum HOM05D004715 ORTHO05D005644 2.7e-09 65.5 49 63.3
Sopen09g003430 Solanum pennellii HOM05D004715 ORTHO05D005644 2.7e-09 65.5 49 63.3
PGSC0003DMG403012981 Solanum tuberosum HOM05D004715 ORTHO05D005644 2.7e-09 65.5 49 63.3
SalBow2G3045 Salvia bowleyana HOM05D004715 ORTHO05D005644 3.5e-09 65.1 53 56.6
Rhsim03G0103800 Rhododendron simsii HOM05D004715 ORTHO05D005644 4.6e-09 64.7 49 63.3
Rhsim08G0215800 Rhododendron simsii HOM05D004715 ORTHO05D005644 4.6e-09 64.7 49 63.3
SGA_v2.0_scaffold5G02664 Striga asiatica HOM05D004715 ORTHO05D005644 4.6e-09 64.7 49 63.3
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 4.6e-09 64.7 49 63.3
MSTRG.11119 Avicennia marina HOM05D004715 ORTHO05D005644 6.0e-09 64.3 49 61.2
CSS0021095 Camellia sinensis var. sinensis HOM05D004715 ORTHO05D005644 6.0e-09 64.3 49 63.3
Cc04_g04100 Coffea canephora HOM05D004715 ORTHO05D005644 6.0e-09 64.3 49 63.3
vmacro18968 Vaccinium macrocarpon HOM05D004715 ORTHO05D005644 6.0e-09 64.3 49 63.3
Dinv30576 Davidia involucrata HOM05D004715 ORTHO05D005644 7.8e-09 63.9 49 63.3
TWI12G0849 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 1.0e-08 63.5 59 52.5
Atru.BG.159.p Acer truncatum HOM05D004715 ORTHO05D005644 1.3e-08 63.2 49 57.1
arahy.Tifrunner.gnm1.ann1.EP2671 Arachis hypogaea HOM05D004715 ORTHO05D005644 1.3e-08 63.2 49 55.1
arahy.Tifrunner.gnm1.ann1.GHMT6A Arachis hypogaea HOM05D004715 ORTHO05D005644 1.3e-08 63.2 49 55.1
Ciclev10026407m.g Citrus clementina HOM05D004715 ORTHO05D005644 1.3e-08 63.2 49 57.1
Ciclev10027256m.g Citrus clementina HOM05D004715 ORTHO05D005644 1.3e-08 63.2 50 56.0
unitig_0.g2002 Utricularia gibba HOM05D004715 ORTHO05D005644 1.3e-08 63.2 48 58.3
Actinidia01764 Actinidia chinensis HOM05D004715 ORTHO05D005644 3.0e-08 62.0 54 61.1
COL.COLO4_12914 Corchorus olitorius HOM05D004715 ORTHO05D005644 3.0e-08 62.0 50 52.0
Atru.chr1.3057 Acer truncatum HOM05D004715 ORTHO05D005644 3.9e-08 61.6 49 55.1
Manes.11G053500 Manihot esculenta HOM05D004715 ORTHO05D005644 5.1e-08 61.2 49 51.0
Potri.006G142300 Populus trichocarpa HOM05D004715 ORTHO05D005644 5.1e-08 61.2 49 51.0
Sabra06G0111400 Salix brachista HOM05D004715 ORTHO05D005644 5.1e-08 61.2 49 51.0
Migut.I00797 Erythranthe guttata HOM05D004715 ORTHO05D005644 8.6e-08 60.5 48 58.3
Thecc.06G070800 Theobroma cacao HOM05D004715 ORTHO05D005644 8.6e-08 60.5 49 51.0
CANSAT56G4056 Cannabis sativa HOM05D004715 ORTHO05D005644 1.1e-07 60.1 50 52.0
Duzib160G0636 Durio zibethinus HOM05D004715 ORTHO05D005644 1.1e-07 60.1 52 50.0
Gohir.D10G075500 Gossypium hirsutum HOM05D004715 ORTHO05D005644 1.5e-07 59.7 49 49.0
Gorai.011G081500 Gossypium raimondii HOM05D004715 ORTHO05D005644 1.5e-07 59.7 49 49.0
C06p28980 Brassica napus HOM05D004715 ORTHO05D005644 1.9e-07 59.3 52 48.1
TWI18G0840 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 1.9e-07 59.3 49 55.1
Duzib235G0750 Durio zibethinus HOM05D004715 ORTHO05D005644 3.3e-07 58.5 49 51.0
BraA07t30299Z Brassica rapa HOM05D004715 ORTHO05D005644 4.3e-07 58.2 50 48.0
Prupe.3G081400 Prunus persica HOM05D004715 ORTHO05D005644 4.3e-07 58.2 48 54.2
Aqoxy1G00791 Aquilegia oxysepala HOM05D004715 ORTHO05D005644 5.6e-07 57.8 49 57.1
Gohir.A05G125400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 5.6e-07 57.8 49 49.0
Gohir.A10G076000 Gossypium hirsutum HOM05D004715 ORTHO05D005644 5.6e-07 57.8 49 49.0
Gorai.009G130400 Gossypium raimondii HOM05D004715 ORTHO05D005644 5.6e-07 57.8 49 49.0
PGR102G1320 Punica granatum HOM05D004715 ORTHO05D005644 7.3e-07 57.4 49 55.1
Sed0013432 Sechium edule HOM05D004715 ORTHO05D005644 7.3e-07 57.4 50 54.0
TAR369G0040 Trochodendron aralioides HOM05D004715 ORTHO05D005644 9.5e-07 57.0 49 55.1
BcaC08g45296 Brassica carinata HOM05D004715 ORTHO05D005644 1.2e-06 56.6 52 48.1
BolC6t38064H Brassica oleracea HOM05D004715 ORTHO05D005644 1.2e-06 56.6 52 48.1
Lalb_Chr22g0350991 Lupinus albus HOM05D004715 ORTHO05D005644 1.2e-06 56.6 50 50.0
Aa31LG4G470 Aethionema arabicum HOM05D004715 ORTHO05D005644 1.6e-06 56.2 50 48.0
AL2G41320 Arabidopsis lyrata HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 46.9
AT1G80190 Arabidopsis thaliana HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 46.9
A02p23740 Brassica napus HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 46.9
BraA02t07366Z Brassica rapa HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 46.9
Carub.0002s2733 Capsella rubella HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 46.9
Carub.0005s0104 Capsella rubella HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 46.9
Gohir.D05G126400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 49.0
GSVIVG01017274001 Vitis vinifera HOM05D004715 ORTHO05D005644 1.6e-06 56.2 49 55.1
BolC2t09760H Brassica oleracea HOM05D004715 ORTHO05D005644 2.1e-06 55.8 50 46.0
FAN26G3166 Fragaria x ananassa HOM05D004715 ORTHO05D005644 2.1e-06 55.8 50 56.0
CARHR074290 Cardamine hirsuta HOM05D004715 ORTHO05D005644 2.8e-06 55.5 49 44.9
FAN14G0801 Fragaria x ananassa HOM05D004715 ORTHO05D005644 2.8e-06 55.5 50 54.0
Thhalv10019155m.g Eutrema salsugineum HOM05D004715 ORTHO05D005644 3.6e-06 55.1 49 44.9
RcHm_v2.0_Chr2g0123461 Rosa chinensis HOM05D004715 ORTHO05D005644 3.6e-06 55.1 50 54.0
Aa31LG1G19480 Aethionema arabicum HOM05D004715 ORTHO05D005644 4.7e-06 54.7 49 44.9
BcaC03g15994 Brassica carinata HOM05D004715 ORTHO05D005644 4.7e-06 54.7 49 44.9
C02p37490 Brassica napus HOM05D004715 ORTHO05D005644 4.7e-06 54.7 49 44.9
FvH4_1g25440 Fragaria vesca HOM05D004715 ORTHO05D005644 4.7e-06 54.7 50 54.0
FAN19G1260 Fragaria x ananassa HOM05D000191 ORTHO05D005644 4.7e-06 54.7 50 54.0
FAN23G0015 Fragaria x ananassa HOM05D004715 ORTHO05D005644 4.7e-06 54.7 50 54.0
Sp5g35610 Schrenkiella parvula HOM05D004715 ORTHO05D005644 4.7e-06 54.7 50 42.0
THA.LOC104812498 Tarenaya hassleriana HOM05D004715 ORTHO05D005644 4.7e-06 54.7 49 44.9
ClCG09G002750 Citrullus lanatus HOM05D004715 ORTHO05D005644 6.2e-06 54.3 50 50.0
MELO3C023404.2 Cucumis melo HOM05D004715 ORTHO05D005644 6.2e-06 54.3 50 50.0
CsaV3_7G032580 Cucumis sativus L. HOM05D004715 ORTHO05D005644 6.2e-06 54.3 50 50.0
RcHm_v2.0_Chr2g0136471 Rosa chinensis HOM05D004715 ORTHO05D005644 6.2e-06 54.3 50 52.0
BcaB05g25289 Brassica carinata HOM05D004715 ORTHO05D005644 8.1e-06 53.9 49 42.9
FvH4_6g30230 Fragaria vesca HOM05D004715 ORTHO05D005644 8.1e-06 53.9 50 52.0
Nn7g35903 Nelumbo nucifera HOM05D004715 ORTHO05D005644 8.1e-06 53.9 49 55.1


User provided reference genes

Program Settings