Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 2.0e-150 537.0 262 100.0
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 4.0e-103 379.8 243 76.1
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 6.0e-83 312.8 213 70.0
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.0e-74 285.4 192 70.3
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 3.9e-74 283.5 165 84.2
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.1e-73 282.0 199 67.8
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 1.5e-73 281.6 193 67.9
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 4.3e-73 280.0 164 79.3
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 5.7e-73 279.6 207 65.2
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 7.4e-73 279.3 221 59.7
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 6.9e-71 272.7 231 59.7
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 5.8e-70 269.6 198 64.1
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 2.2e-69 267.7 199 64.3
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 4.2e-68 263.5 169 71.0
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 7.1e-68 262.7 188 66.5
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.6e-67 261.5 192 59.9
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 2.7e-67 260.8 213 58.2
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 6.1e-67 259.6 180 67.8
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 7.9e-67 259.2 193 61.7
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.0e-66 258.8 182 65.9
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.3e-66 258.5 184 67.4
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 1.3e-66 258.5 176 66.5
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 1.8e-66 258.1 183 66.7
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 1.8e-66 258.1 197 62.4
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 3.0e-66 257.3 190 64.7
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 3.0e-66 257.3 194 63.4
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 3.0e-66 257.3 215 58.1
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 6.7e-66 256.1 182 64.3
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 8.7e-66 255.8 182 64.3
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 8.7e-66 255.8 161 72.0
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 8.7e-66 255.8 192 63.0
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 1.1e-65 255.4 182 64.3
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 1.1e-65 255.4 168 70.8
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 1.5e-65 255.0 182 64.3
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.5e-65 255.0 185 65.9
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 1.9e-65 254.6 191 63.9
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 2.5e-65 254.2 131 90.8
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 3.3e-65 253.8 185 63.2
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 3.3e-65 253.8 182 63.7
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 4.3e-65 253.4 242 53.3
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 5.7e-65 253.1 194 60.3
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 5.7e-65 253.1 161 70.8
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 7.4e-65 252.7 175 66.3
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 7.4e-65 252.7 194 62.4
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 1.6e-64 251.5 223 56.1
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 2.2e-64 251.1 167 69.5
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 2.2e-64 251.1 172 68.6
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 2.8e-64 250.8 220 53.6
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 3.7e-64 250.4 195 59.5
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 4.8e-64 250.0 203 61.6
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 6.3e-64 249.6 182 63.7
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.1e-63 248.8 177 61.6
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.4e-63 248.4 165 69.7
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.8e-63 248.1 226 54.4
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 3.1e-63 247.3 183 63.4
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 3.1e-63 247.3 181 64.1
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 2.6e-62 244.2 195 59.5
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 2.6e-62 244.2 177 59.3
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 3.4e-62 243.8 197 59.9
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 4.5e-62 243.4 154 71.4
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 7.7e-62 242.7 180 62.8
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 1.0e-61 242.3 193 60.6
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 1.7e-61 241.5 181 63.0
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 2.9e-61 240.7 179 61.5
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 2.9e-61 240.7 192 58.9
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 6.5e-61 239.6 185 59.5
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 8.5e-61 239.2 232 53.9
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 3.2e-60 237.3 195 57.9
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 3.2e-60 237.3 185 58.9
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 5.5e-60 236.5 185 62.7
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 5.5e-60 236.5 186 58.6
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 7.2e-60 236.1 211 54.0
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 9.4e-60 235.7 163 66.9
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 2.1e-59 234.6 187 58.3
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 1.0e-58 232.3 185 59.5
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 2.3e-58 231.1 202 52.5
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 3.0e-58 230.7 158 65.2
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 5.1e-58 229.9 161 64.0
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 5.1e-58 229.9 161 63.4
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.3e-56 225.3 145 73.1
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 1.7e-56 224.9 216 50.9
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 6.3e-56 223.0 162 66.7
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 9.1e-55 219.2 232 48.7
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 2.6e-54 217.6 143 68.5
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 3.8e-53 213.8 189 53.4
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 6.5e-53 213.0 212 54.7
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 4.2e-52 210.3 143 65.7
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.2e-51 208.8 153 60.8
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 2.4e-47 194.5 173 57.8
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 7.7e-46 189.5 204 50.0
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.0e-45 189.1 192 49.5
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 2.9e-45 187.6 144 67.4
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 1.6e-30 138.7 137 51.8
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 3.8e-29 134.0 102 55.9
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 1.0e-26 125.9 108 59.3
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.8e-26 125.2 80 72.5
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.3e-26 124.8 76 73.7
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 1.4e-23 115.5 131 39.7
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 1.8e-23 115.2 56 92.9
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 1.2e-22 112.5 98 56.1
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 2.0e-22 111.7 128 39.8
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 1.6e-19 102.1 135 34.8
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 4.4e-17 94.0 163 33.1
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 6.3e-16 90.1 54 74.1
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 5.4e-15 87.0 67 58.2
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 5.4e-15 87.0 131 35.9
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 2.3e-13 81.6 127 40.2
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.3e-12 77.8 46 71.7
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.3e-12 77.8 46 71.7
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 1.8e-10 72.0 46 67.4
EL10Ac8g19311 Beta vulgaris HOM05D006866 ORTHO05D008689 5.8e-09 67.0 48 62.5
Cfa002018 Carpinus fangiana HOM05D000082 ORTHO05D000038 7.5e-09 66.6 50 66.0
MD05G1251100 Malus domestica HOM05D006866 ORTHO05D008689 4.9e-08 63.9 46 65.2
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 5.4e-07 60.5 49 57.1
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 5.4e-07 60.5 107 37.4
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 5.4e-07 60.5 39 64.1
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 7.0e-07 60.1 54 50.0
MSTRG.14189 Avicennia marina HOM05D002479 ORTHO05D002675 9.2e-07 59.7 181 25.4


User provided reference genes

Program Settings