Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 6.9e-287 989.9 503 100.0
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 4.8e-240 834.3 515 84.7
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.4e-191 673.3 451 78.0
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 1.0e-189 667.2 457 76.6
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 2.6e-153 546.2 466 61.4
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.3e-152 543.9 462 63.0
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 8.5e-152 541.2 457 62.6
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.7e-150 536.2 467 60.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 3.6e-150 535.8 465 60.9
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 1.4e-146 523.9 448 61.6
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 2.6e-145 519.6 462 58.9
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 5.9e-145 518.5 458 59.4
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 1.4e-143 513.8 392 64.5
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 9.4e-143 511.1 459 57.7
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 2.1e-142 510.0 455 59.1
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 6.1e-142 508.4 393 65.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.0e-141 507.7 442 58.1
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 3.0e-141 506.1 444 58.6
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 3.9e-141 505.8 388 65.2
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 5.2e-141 505.4 416 62.5
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 8.8e-141 504.6 447 59.5
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 1.1e-140 504.2 388 65.5
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 2.0e-140 503.4 388 65.2
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.6e-140 503.1 400 62.8
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 2.6e-140 503.1 426 59.6
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.6e-140 503.1 387 65.9
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 4.4e-140 502.3 388 65.2
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 4.4e-140 502.3 414 62.1
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 5.7e-140 501.9 421 60.8
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 2.2e-139 500.0 409 62.6
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 3.7e-139 499.2 393 63.6
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 3.7e-139 499.2 408 61.5
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 1.1e-138 497.7 460 56.7
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 5.3e-138 495.4 387 63.8
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 5.3e-138 495.4 458 58.5
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.3e-138 495.4 459 56.4
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.6e-137 493.8 402 62.9
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.5e-137 492.7 410 60.0
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 3.5e-137 492.7 459 58.4
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 4.5e-137 492.3 464 55.6
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.0e-136 491.1 459 55.8
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.0e-136 491.1 393 62.6
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.3e-136 490.7 447 58.2
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.2e-136 490.0 428 60.0
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 5.0e-136 488.8 458 57.2
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 6.5e-136 488.4 397 60.5
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 8.5e-136 488.0 417 58.3
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.5e-135 487.3 463 57.2
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 4.2e-135 485.7 458 57.0
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 9.4e-135 484.6 465 55.9
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 9.4e-135 484.6 426 58.9
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.2e-134 484.2 457 57.1
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 2.1e-134 483.4 463 54.2
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 2.7e-134 483.0 406 59.9
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.4e-133 480.7 455 55.8
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.8e-133 480.3 415 61.7
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 3.0e-133 479.6 407 60.4
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.2e-132 477.6 437 55.6
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 2.0e-132 476.9 415 58.6
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.4e-132 475.7 376 62.5
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 4.4e-132 475.7 388 59.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 5.7e-132 475.3 446 54.7
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 7.5e-132 474.9 443 54.4
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 7.5e-132 474.9 458 53.7
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 1.3e-131 474.2 441 54.6
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.3e-131 474.2 464 53.2
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.3e-131 474.2 385 61.3
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.2e-131 473.4 458 56.1
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.8e-130 470.3 477 53.2
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.0e-129 466.8 384 59.1
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.7e-129 466.5 451 53.2
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.3e-128 464.2 394 59.1
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 6.5e-128 461.8 386 59.1
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-127 460.7 451 52.8
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.9e-127 460.3 407 55.3
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 3.2e-127 459.5 399 57.6
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 1.2e-126 457.6 521 49.3
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 2.3e-125 453.4 359 60.2
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.0e-124 450.3 454 50.7
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.3e-123 447.6 461 53.4
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 2.8e-123 446.4 453 52.3
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.6e-121 440.7 391 58.6
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 3.8e-120 436.0 480 52.7
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.4e-117 427.6 474 47.3
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.8e-117 427.2 454 51.5
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 4.0e-117 426.0 394 54.3
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 5.7e-116 422.2 344 60.8
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 9.8e-116 421.4 390 56.4
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 2.4e-114 416.8 399 55.9
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 4.1e-114 416.0 340 60.6
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 5.9e-113 412.1 394 52.8
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 5.8e-108 395.6 384 57.8
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 5.4e-106 389.0 272 70.6
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.3e-104 384.4 334 54.5
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 3.3e-103 379.8 335 54.3
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-98 364.8 454 46.0
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.4e-90 337.0 406 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 6.0e-89 332.4 407 43.0
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.6e-88 328.9 385 47.0
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 2.6e-84 317.0 379 43.8
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.6e-84 315.5 384 45.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 4.6e-81 306.2 222 66.2
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 6.0e-81 305.8 383 45.7
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 6.0e-81 305.8 383 42.3
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.8e-70 270.4 263 50.2
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 6.0e-65 252.7 254 53.9
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.6e-62 244.6 316 45.6
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.4e-61 240.7 215 58.6
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.3e-51 208.4 223 48.0
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 5.5e-50 203.0 447 32.4
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 8.2e-38 162.5 161 57.8
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 6.7e-32 142.9 102 58.8
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 2.0e-31 141.4 416 30.0
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 3.3e-31 140.6 132 53.0
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.3e-27 128.6 97 59.8
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.8e-24 118.2 83 62.7
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 6.3e-22 109.8 393 26.2
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.1e-21 109.0 96 57.3
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 2.0e-20 104.8 64 76.6
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.3e-15 87.4 89 47.2
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.8e-13 81.6 61 62.3
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 5.9e-12 76.6 57 71.9
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.3e-11 75.5 69 50.7
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.2e-09 68.9 68 50.0
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 2.7e-09 67.8 112 45.5


User provided reference genes

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