Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0214571 Helianthus annuus HOM05D005486 ORTHO05D007411 2.0e-65 252.3 127 100.0
ECA233G2219 Erigeron canadensis HOM05D005486 ORTHO05D007411 4.8e-43 177.9 118 74.6
ECA234G1298 Erigeron canadensis HOM05D005486 ORTHO05D007411 4.2e-39 164.9 130 64.6
Cc11_g10960 Coffea canephora HOM05D005486 ORTHO05D007411 4.6e-38 161.4 127 63.8
Lsat_1_v5_gn_8_38000 Lactuca sativa HOM05D005486 ORTHO05D007411 7.9e-38 160.6 141 58.9
Sopen05g005890 Solanum pennellii HOM05D005486 ORTHO05D007411 1.3e-37 159.8 128 68.0
PGSC0003DMG400025103 Solanum tuberosum HOM05D005486 ORTHO05D007411 3.0e-37 158.7 129 67.4
MSTRG.13492 Avicennia marina HOM05D005486 ORTHO05D007411 3.9e-37 158.3 127 61.4
TAR629G0806 Trochodendron aralioides HOM05D005486 ORTHO05D007411 8.7e-37 157.1 128 64.1
Nitab4.5_0010558g0010 Nicotiana tabacum HOM05D005486 ORTHO05D007411 2.5e-36 155.6 127 67.7
Oeu056581.1 Olea europaea HOM05D005486 ORTHO05D007411 5.6e-36 154.5 127 59.1
VMungo1215G0217 Vigna mungo HOM05D005486 ORTHO05D007411 5.6e-36 154.5 127 61.4
Dinv16542 Davidia involucrata HOM05D005486 ORTHO05D007411 7.4e-36 154.1 128 62.5
arahy.Tifrunner.gnm1.ann1.HYI70A Arachis hypogaea HOM05D005486 ORTHO05D007411 1.3e-35 153.3 127 63.0
arahy.Tifrunner.gnm1.ann1.S5RRBC Arachis hypogaea HOM05D005486 ORTHO05D007411 1.3e-35 153.3 127 63.0
Nitab4.5_0003073g0050 Nicotiana tabacum HOM05D005486 ORTHO05D007411 1.6e-35 152.9 127 66.9
Phvul.003G024300 Phaseolus vulgaris HOM05D005486 ORTHO05D007411 2.8e-35 152.1 127 61.4
MD16G1051000 Malus domestica HOM05D005486 ORTHO05D007411 3.7e-35 151.8 128 59.4
Thecc.02G364500 Theobroma cacao HOM05D005486 ORTHO05D007411 3.7e-35 151.8 128 57.8
TAR622G0197 Trochodendron aralioides HOM05D005486 ORTHO05D007411 3.7e-35 151.8 129 62.0
Hma1.2p1_1391F.1_g280160 Hydrangea macrophylla HOM05D005486 ORTHO05D007411 4.8e-35 151.4 130 58.5
SalBow8G5042 Salvia bowleyana HOM05D005486 ORTHO05D007411 4.8e-35 151.4 127 59.1
Duzib251G0619 Durio zibethinus HOM05D005486 ORTHO05D007411 8.1e-35 150.6 127 58.3
unitig_27.g25227 Utricularia gibba HOM05D005486 ORTHO05D007411 1.1e-34 150.2 127 60.6
Glyma.01G092400 Glycine max HOM05D005486 ORTHO05D007411 1.8e-34 149.4 127 60.6
MD13G1050300 Malus domestica HOM05D005486 ORTHO05D007411 1.8e-34 149.4 127 58.3
CSS0021505 Camellia sinensis var. sinensis HOM05D005486 ORTHO05D007411 2.4e-34 149.1 129 59.7
Lj6A769T91 Lonicera japonica HOM05D005486 ORTHO05D007411 2.4e-34 149.1 128 58.6
CAN.G184.62 Capsicum annuum HOM05D005486 ORTHO05D007411 3.1e-34 148.7 127 66.1
Lalb_Chr10g0099591 Lupinus albus HOM05D005486 ORTHO05D007411 3.1e-34 148.7 127 66.9
Lalb_Chr17g0341801 Lupinus albus HOM05D005486 ORTHO05D007411 4.0e-34 148.3 127 66.1
CsaV3_5G033800 Cucumis sativus L. HOM05D005486 ORTHO05D007411 5.3e-34 147.9 127 60.6
Peaxi162Scf00198g00414 Petunia axillaris HOM05D005486 ORTHO05D007411 6.9e-34 147.5 127 63.8
Zm00001eb382160 Zea mays HOM05D005486 ORTHO05D007411 6.9e-34 147.5 131 59.5
Sabra10G0101300 Salix brachista HOM05D005486 ORTHO05D007411 9.0e-34 147.1 127 58.3
Glyma.02G129800 Glycine max HOM05D005486 ORTHO05D007411 1.5e-33 146.4 127 66.1
Gohir.D12G176000 Gossypium hirsutum HOM05D005486 ORTHO05D007411 1.5e-33 146.4 127 58.3
Gorai.008G188400 Gossypium raimondii HOM05D005486 ORTHO05D007411 1.5e-33 146.4 127 58.3
Nn3g17656 Nelumbo nucifera HOM05D005486 ORTHO05D007411 1.5e-33 146.4 128 64.8
QL03p044642 Quercus lobata HOM05D005486 ORTHO05D007411 1.5e-33 146.4 126 65.9
ClCG00G003720 Citrullus lanatus HOM05D005486 ORTHO05D007411 2.6e-33 145.6 127 59.8
ClCG05G023220 Citrullus lanatus HOM05D005486 ORTHO05D007411 2.6e-33 145.6 127 59.8
Eucgr.G02380 Eucalyptus grandis HOM05D005486 ORTHO05D007411 3.4e-33 145.2 128 57.8
Cpa.g.sc1.245 Carica papaya HOM05D005486 ORTHO05D007411 9.9e-33 143.7 127 58.3
Ciclev10030527m.g Citrus clementina HOM05D005486 ORTHO05D007411 9.9e-33 143.7 128 57.0
HanXRQChr16g0527001 Helianthus annuus HOM05D005486 ORTHO05D007411 9.9e-33 143.7 132 62.1
Lj2g0014013 Lotus japonicus HOM05D005486 ORTHO05D007411 9.9e-33 143.7 127 59.8
Cfa008789 Carpinus fangiana HOM05D005486 ORTHO05D007411 1.3e-32 143.3 131 64.1
Gohir.A12G173400 Gossypium hirsutum HOM05D005486 ORTHO05D007411 1.7e-32 142.9 127 57.5
Lsat_1_v5_gn_4_20360 Lactuca sativa HOM05D005486 ORTHO05D007411 2.2e-32 142.5 131 63.4
Os06g0489500 Oryza sativa ssp. japonica HOM05D005486 ORTHO05D007411 2.2e-32 142.5 133 58.6
Aqoxy3G03843 Aquilegia oxysepala HOM05D005486 ORTHO05D007411 2.9e-32 142.1 128 58.6
ATR0618G023 Amborella trichopoda HOM05D005486 ORTHO05D007411 4.9e-32 141.4 128 59.4
TWI79G0683 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 4.9e-32 141.4 127 56.7
SGA_v2.0_scaffold59G20635 Striga asiatica HOM05D005486 ORTHO05D007411 6.4e-32 141.0 125 57.6
COL.COLO4_11242 Corchorus olitorius HOM05D005486 ORTHO05D007411 8.4e-32 140.6 128 60.9
MBI16_g36049_MAGBIO Magnolia biondii HOM05D005486 ORTHO05D007411 8.4e-32 140.6 127 59.8
GSVIVG01012004001 Vitis vinifera HOM05D005486 ORTHO05D007411 8.4e-32 140.6 128 58.6
Haze_11801 Corylus avellana HOM05D005486 ORTHO05D007411 1.1e-31 140.2 129 62.8
Sed0017603 Sechium edule HOM05D005486 ORTHO05D007411 1.4e-31 139.8 127 54.3
Sc14g0007640 Simmondsia chinensis HOM05D005486 ORTHO05D007411 1.4e-31 139.8 128 57.0
Aa31sc12G40 Aethionema arabicum HOM05D005486 ORTHO05D007411 1.9e-31 139.4 117 59.0
DCAR_009846 Daucus carota HOM05D005486 ORTHO05D007411 1.9e-31 139.4 133 60.2
Psat2g089040 Pisum sativum HOM05D005486 ORTHO05D007411 1.9e-31 139.4 127 57.5
Manes.06G075700 Manihot esculenta HOM05D005486 ORTHO05D007411 2.4e-31 139.0 127 55.1
CANSAT64G2054 Cannabis sativa HOM05D005486 ORTHO05D007411 3.2e-31 138.7 127 56.7
FAN22G2135 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.2e-30 136.7 127 54.3
Sabra08G0084000 Salix brachista HOM05D005486 ORTHO05D007411 1.6e-30 136.3 127 56.7
Ca_07880_v3 Cicer arietinum L. HOM05D005486 ORTHO05D007411 7.9e-30 134.0 122 62.3
PSO782G0099 Papaver somniferum HOM05D005486 ORTHO05D007411 7.9e-30 134.0 128 60.2
Hund05782 Selenicereus undatus HOM05D005486 ORTHO05D007411 7.9e-30 134.0 130 56.2
Prupe.1G301600 Prunus persica HOM05D005486 ORTHO05D007411 1.0e-29 133.7 127 55.9
FAN07G1378 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.3e-29 133.3 127 58.3
Potri.008G111100 Populus trichocarpa HOM05D005486 ORTHO05D007411 1.3e-29 133.3 127 58.3
FAN17G1167 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.8e-29 132.9 127 59.8
PGR119G1261 Punica granatum HOM05D005486 ORTHO05D007411 1.8e-29 132.9 127 60.6
Migut.E00279 Erythranthe guttata HOM05D005486 ORTHO05D007411 3.0e-29 132.1 134 59.7
vmacro10503 Vaccinium macrocarpon HOM05D005486 ORTHO05D007411 8.7e-29 130.6 128 58.6
PSO063G5162 Papaver somniferum HOM05D005486 ORTHO05D007411 1.1e-28 130.2 130 59.2
TPR.G24201 Trifolium pratense HOM05D005486 ORTHO05D007411 1.5e-28 129.8 123 62.6
THA.LOC104801666 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 2.5e-28 129.0 83 71.1
Ah.02g127300 Amaranthus hybridus HOM05D005486 ORTHO05D007411 3.3e-28 128.6 122 54.9
TWI31G0478 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 3.3e-28 128.6 120 56.7
Rhsim09G0115000 Rhododendron simsii HOM05D005486 ORTHO05D007411 4.3e-28 128.3 121 62.0
CARHR061530 Cardamine hirsuta HOM05D005486 ORTHO05D007411 9.6e-28 127.1 84 71.4
BcaB05g24405 Brassica carinata HOM05D005486 ORTHO05D007411 1.3e-27 126.7 83 69.9
BcaC03g14978 Brassica carinata HOM05D005486 ORTHO05D007411 1.3e-27 126.7 83 69.9
C02p25130 Brassica napus HOM05D005486 ORTHO05D007411 1.3e-27 126.7 83 69.9
BolC2t08592H Brassica oleracea HOM05D005486 ORTHO05D007411 1.3e-27 126.7 83 69.9
CDE04G2499 Ceratophyllum demersum HOM05D005486 ORTHO05D007411 2.1e-27 125.9 127 55.9
CDE03G0168 Ceratophyllum demersum HOM05D005486 ORTHO05D007411 2.8e-27 125.6 127 55.1
RcHm_v2.0_Chr4g0436391 Rosa chinensis HOM05D005486 ORTHO05D007411 2.8e-27 125.6 127 58.3
BraA02t06590Z Brassica rapa HOM05D005486 ORTHO05D007411 3.7e-27 125.2 83 69.9
Medtr4g012000 Medicago truncatula HOM05D005486 ORTHO05D007411 3.7e-27 125.2 122 56.6
A02p15280 Brassica napus HOM05D005486 ORTHO05D007411 6.2e-27 124.4 83 68.7
AUR62002956 Chenopodium quinoa HOM05D005486 ORTHO05D007411 1.1e-26 123.6 124 58.9
Thhalv10018020m.g Eutrema salsugineum HOM05D005486 ORTHO05D007411 1.8e-26 122.9 81 69.1
AT1G68720 Arabidopsis thaliana HOM05D005486 ORTHO05D007411 2.4e-26 122.5 81 69.1
FvH4_4g28440 Fragaria vesca HOM05D005486 ORTHO05D007411 3.1e-26 122.1 127 55.9
FAN12G0975 Fragaria x ananassa HOM05D005486 ORTHO05D007411 3.1e-26 122.1 127 55.9
Sp5g23820 Schrenkiella parvula HOM05D005486 ORTHO05D007411 4.0e-26 121.7 81 69.1
Sc04g0006910 Simmondsia chinensis HOM05D005486 ORTHO05D007411 4.0e-26 121.7 127 52.0
EL10Ac6g14546 Beta vulgaris HOM05D005486 ORTHO05D007411 9.0e-26 120.6 127 53.5
Carub.0002s1526 Capsella rubella HOM05D005486 ORTHO05D007411 3.4e-25 118.6 127 56.7
Atru.chr11.1428 Acer truncatum HOM05D005486 ORTHO05D007411 2.2e-24 115.9 127 49.6
CiPaw.05G117000 Carya illinoinensis HOM05D005486 ORTHO05D007411 3.2e-23 112.1 128 57.0
AUR62007761 Chenopodium quinoa HOM05D005486 ORTHO05D007411 4.2e-23 111.7 124 55.6
MELO3C012197.2 Cucumis melo HOM05D005486 ORTHO05D007411 4.2e-23 111.7 72 70.8
THA.LOC104808436 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 3.3e-20 102.1 82 61.0
Pp3c9_12190 Physcomitrium patens HOM05D005486 ORTHO05D007411 1.2e-17 93.6 85 56.5
Mapoly0072s0096 Marchantia polymorpha HOM05D005486 ORTHO05D007411 1.5e-17 93.2 89 53.9
Oeu041861.2 Olea europaea HOM05D005486 ORTHO05D007411 3.8e-16 88.6 96 45.8
MCO07G010 Micromonas commoda HOM05D005486 ORTHO05D007411 1.2e-14 83.6 79 50.6
Actinidia16599 Actinidia chinensis HOM05D005486 ORTHO05D007411 2.8e-11 72.4 38 81.6
PRCOL_00006665 Prasinoderma coloniale HOM05D005486 ORTHO05D007411 3.7e-11 72.0 84 45.2
SEGI_38327 Sequoiadendron giganteum HOM05D005486 ORTHO05D007411 1.5e-09 66.6 31 96.8
SalBow6G0282 Salvia bowleyana HOM05D005486 ORTHO05D014301 3.4e-09 65.5 31 90.3
SalBow8G1626 Salvia bowleyana HOM05D005486 ORTHO05D014301 3.4e-09 65.5 31 90.3
Actinidia32432 Actinidia chinensis HOM05D005486 ORTHO05D014301 4.5e-09 65.1 52 57.7
MD13G1050100 Malus domestica HOM05D005486 ORTHO05D007411 1.7e-08 63.2 31 87.1


User provided reference genes

Program Settings